-
1
-
-
84986522918
-
ICM: A new method for protein modeling and design
-
Abagyan, R. A., M. M. Totrov, and D. N. Kuznetsov. 1994. ICM: a new method for protein modeling and design. J. Comp. Chem. 15:488-506.
-
(1994)
J. Comp. Chem.
, vol.15
, pp. 488-506
-
-
Abagyan, R.A.1
Totrov, M.M.2
Kuznetsov, D.N.3
-
2
-
-
0029565489
-
2+-ATPase by site-directed mutagenesis
-
2+-ATPase by site-directed mutagenesis. Biosci. Rep. 15:243-261.
-
(1995)
Biosci. Rep.
, vol.15
, pp. 243-261
-
-
Andersen, J.P.1
-
4
-
-
0031970010
-
The catalytic domain of the P-type ATPase has the haloacid dehalogenase fold
-
Aravind, L., M. Y. Galperin, and E. V. Koonin. 1998. The catalytic domain of the P-type ATPase has the haloacid dehalogenase fold. Trends Biol. Sci. 23:127-129.
-
(1998)
Trends Biol. Sci.
, vol.23
, pp. 127-129
-
-
Aravind, L.1
Galperin, M.Y.2
Koonin, E.V.3
-
6
-
-
0031964372
-
Evolution of substrate specificities in the P-type ATPase superfamily
-
Axelsen, K. B., and M. G. Palmgren. 1998. Evolution of substrate specificities in the P-type ATPase superfamily. J. Mol. Evol. 46:84-101.
-
(1998)
J. Mol. Evol.
, vol.46
, pp. 84-101
-
-
Axelsen, K.B.1
Palmgren, M.G.2
-
8
-
-
0033573063
-
Conformational changes induced by phosphorylation of the FixJ receiver domain
-
Birck, C., L. Mourey, P. Gouet, B. Fabry, J. Schumacher, P. Rousseau, D. Kahn, and J.-P. Samama. 1999. Conformational changes induced by phosphorylation of the FixJ receiver domain. Structure. 7:1505-1515.
-
(1999)
Structure
, vol.7
, pp. 1505-1515
-
-
Birck, C.1
Mourey, L.2
Gouet, P.3
Fabry, B.4
Schumacher, J.5
Rousseau, P.6
Kahn, D.7
Samama, J.-P.8
-
9
-
-
0019053306
-
Relation between structure and function of alpha/beta-proteins
-
Branden, C. I. 1980. Relation between structure and function of alpha/beta-proteins. Q. Rev. Biophys. 13:317-338.
-
(1980)
Q. Rev. Biophys.
, vol.13
, pp. 317-338
-
-
Branden, C.I.1
-
10
-
-
15444354546
-
2+-ATPase: Nucleotide-and metal-binding sites
-
2+-ATPase: nucleotide-and metal-binding sites. J. Biol. Chem. 273:6619-6631.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 6619-6631
-
-
Champeil, P.1
Menguy, T.2
Soulie, S.3
Juul, B.4
De Gracia, A.G.5
Rusconi, F.6
Falson, P.7
Denoroy, L.8
Henao, F.9
Le Maire, M.10
Moller, J.V.11
-
13
-
-
0022830347
-
Oligovanadate binding to sarcoplasmic reticulum ATPase. Evidence for substrate analogue behavior
-
Coan, C., D. J. Scales, and A. J. Murphy. 1986. Oligovanadate binding to sarcoplasmic reticulum ATPase. Evidence for substrate analogue behavior. J. Biol. Chem. 261:10394-10403.
-
(1986)
J. Biol. Chem.
, vol.261
, pp. 10394-10403
-
-
Coan, C.1
Scales, D.J.2
Murphy, A.J.3
-
14
-
-
0032486282
-
A new class of phosphotransferases phosphorylated on an aspartate residue in an amino-terminal DXDX(T/V) motif
-
Collet, J. F., V. Stroobant, M. Pirard, G. Delpierre, and E. Van Schaftingen. 1998. A new class of phosphotransferases phosphorylated on an aspartate residue in an amino-terminal DXDX(T/V) motif. J. Biol. Chem. 273:14107-14112.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 14107-14112
-
-
Collet, J.F.1
Stroobant, V.2
Pirard, M.3
Delpierre, G.4
Van Schaftingen, E.5
-
17
-
-
0026707393
-
Structural modelling of P-type ion pumps
-
Green, N. M, and D. L. Stokes. 1992. Structural modelling of P-type ion pumps. Acta Physiol. Scand. 146:59-68.
-
(1992)
Acta Physiol. Scand.
, vol.146
, pp. 59-68
-
-
Green, N.M.1
Stokes, D.L.2
-
18
-
-
0029786674
-
Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp.
-
Hisano, T., Y. Hata, T. Fujii, J.-Q. Liu, T. Kurihara, N. Esaki, and K. Soda. 1996. Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp. YL. J. Biol. Chem. 271:20322-20330.
-
(1996)
YL. J. Biol. Chem.
, vol.271
, pp. 20322-20330
-
-
Hisano, T.1
Hata, Y.2
Fujii, T.3
Liu, J.-Q.4
Kurihara, T.5
Esaki, N.6
Soda, K.7
-
19
-
-
0032510709
-
Erythrosin isothiocyanate selectively labels lysine464 within an ATP-protectable binding site on the Ca-ATPase in skeletal sarcoplasmic reticulum membranes
-
Huang, S., S. Negash, and T. C. Squier. 1998. Erythrosin isothiocyanate selectively labels lysine464 within an ATP-protectable binding site on the Ca-ATPase in skeletal sarcoplasmic reticulum membranes. Biochemistry. 37:6949-6957.
-
(1998)
Biochemistry
, vol.37
, pp. 6949-6957
-
-
Huang, S.1
Negash, S.2
Squier, T.C.3
-
21
-
-
0026244229
-
MOLSCRIPT - A program to produce detailed and schematic plots of protein structures
-
Kraulis. 1991. MOLSCRIPT - a program to produce detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24:946-950.
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis1
-
23
-
-
0029006127
-
Comprehensive site-directed mutagenesis of L-2-halo acid dehalogenase to probe catalytic amino acid residues
-
Kurihara, T., J. Q. Liu, V. Nardi-Dei, H. Koshikawa, N. Esaki, and K. Soda. 1995. Comprehensive site-directed mutagenesis of L-2-halo acid dehalogenase to probe catalytic amino acid residues. J. Biochem. 117: 1317-1322.
-
(1995)
J. Biochem.
, vol.117
, pp. 1317-1322
-
-
Kurihara, T.1
Liu, J.Q.2
Nardi-Dei, V.3
Koshikawa, H.4
Esaki, N.5
Soda, K.6
-
24
-
-
0032510975
-
Crystal structures of reaction intermediates of L-2 haloacid dehalogenase and implications for the reaction mechanism
-
Li, Y.-F., Y. Hata, T. Fujii, T. Hisano, M. Nishihara, T. Kurihara, and N. Esaki. 1998. Crystal structures of reaction intermediates of L-2 haloacid dehalogenase and implications for the reaction mechanism. J. Biol. Chem. 273:15035-15044.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 15035-15044
-
-
Li, Y.-F.1
Hata, Y.2
Fujii, T.3
Hisano, T.4
Nishihara, M.5
Kurihara, T.6
Esaki, N.7
-
26
-
-
0022371456
-
2+-dependent ATPase from rabbit muscle sarcoplasmic reticulum, deduced from its complementary DNA sequence
-
2+-dependent ATPase from rabbit muscle sarcoplasmic reticulum, deduced from its complementary DNA sequence. Nature. 316:696-700.
-
(1985)
Nature
, vol.316
, pp. 696-700
-
-
MacLennan, D.H.1
Brandl, C.J.2
Korczak, B.3
Green, N.M.4
-
28
-
-
77956737449
-
The ATP binding sites of P-type ion transport ATPases
-
McIntosh, D. 1998. The ATP binding sites of P-type ion transport ATPases. Adv. Mol Cell Biol. 23A:33-99.
-
(1998)
Adv. Mol Cell Biol.
, vol.23 A
, pp. 33-99
-
-
McIntosh, D.1
-
31
-
-
0019448759
-
Inhibition of sodium and potassium adenosine triphosphatase by 2′,3′-O-(2, 4, 6-trinitrocyclohexadienylidene) adenine nucleotides. Implications for the structure and mechanism of the Na:K pump
-
Moczydlowski, E. G., and P. A. Fortes. 1981. Inhibition of sodium and potassium adenosine triphosphatase by 2′,3′-O-(2, 4, 6-trinitrocyclohexadienylidene) adenine nucleotides. Implications for the structure and mechanism of the Na:K pump. J. Biol. Chem. 256:2357-2366.
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 2357-2366
-
-
Moczydlowski, E.G.1
Fortes, P.A.2
-
33
-
-
0029940235
-
Structural organization, ion transport, and energy transduction of ATPases
-
Moller, J. V., B. Juul, and M. le Maire. 1996. Structural organization, ion transport, and energy transduction of ATPases. Biochim. Biophys. Acta. 1286:1-51.
-
(1996)
Biochim. Biophys. Acta
, vol.1286
, pp. 1-51
-
-
Moller, J.V.1
Juul, B.2
Le Maire, M.3
-
34
-
-
0024207312
-
2+-ATPase of sarcoplasmic reticulum
-
2+-ATPase of sarcoplasmic reticulum. Biochim. Biophys. Acta. 946:57-65.
-
(1988)
Biochim. Biophys. Acta
, vol.946
, pp. 57-65
-
-
Murphy, A.J.1
-
38
-
-
0027337468
-
2+ to the calcium adenosinetriphosphatase of sarcoplasmic reticulum follows a random mechanism
-
2+ to the calcium adenosinetriphosphatase of sarcoplasmic reticulum follows a random mechanism. Biochemistry. 32:6632-6642.
-
(1993)
Biochemistry
, vol.32
, pp. 6632-6642
-
-
Reinstein, J.1
Jencks, W.P.2
-
39
-
-
0023810619
-
+ pump isolated from dog kidney
-
+ pump isolated from dog kidney. J. Physiol. (Lond). 404:497-514.
-
(1988)
J. Physiol. (Lond)
, vol.404
, pp. 497-514
-
-
Richards, D.E.1
-
40
-
-
0033561221
-
2+-binding site in the P-type ATPase and phosphatase members of the HAD (haloacid dehalogenase) superfamily by structural similarity to the response regulator protein CheY
-
2+-binding site in the P-type ATPase and phosphatase members of the HAD (haloacid dehalogenase) superfamily by structural similarity to the response regulator protein CheY. Biochem. J. 339:223-226.
-
(1999)
Biochem. J.
, vol.339
, pp. 223-226
-
-
Ridder, I.S.1
Dijkstra, B.W.2
-
41
-
-
0031455377
-
Three-dimensional structure of L-2-haloacid dehalogenase from Xanthobacter autotrophicus GJ10 complexed with the substrate-analogue formate
-
Ridder, I. S., H. J. Rozeboom, K. H. Kalk, D. B. Janssen, and B. W. Dijkstra. 1997. Three-dimensional structure of L-2-haloacid dehalogenase from Xanthobacter autotrophicus GJ10 complexed with the substrate-analogue formate. J. Biol. Chem. 272:33015-33022.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 33015-33022
-
-
Ridder, I.S.1
Rozeboom, H.J.2
Kalk, K.H.3
Janssen, D.B.4
Dijkstra, B.W.5
-
42
-
-
0027291015
-
Prediction of protein secondary structure at better than 70% accuracy
-
Rost, B., and C. Sander. 1993. Prediction of protein secondary structure at better than 70% accuracy. J. Mol. Biol. 232:584-599.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 584-599
-
-
Rost, B.1
Sander, C.2
-
44
-
-
0029960235
-
X-ray structure of the magnesium(II). ADP.vanadate complex of the Dictyostelium discoideum myosin motor domain to 1.9 Å resolution
-
Smith, C. A., and I. Rayment. 1996. X-ray structure of the magnesium(II). ADP.vanadate complex of the Dictyostelium discoideum myosin motor domain to 1.9 Å resolution. Biochemistry. 35:5404-5417.
-
(1996)
Biochemistry
, vol.35
, pp. 5404-5417
-
-
Smith, C.A.1
Rayment, I.2
-
45
-
-
0033024577
-
Forming and inhibiting PRT active sites
-
Smith, J. L. 1999. Forming and inhibiting PRT active sites. Nature Struct. Biol. 6:502-504.
-
(1999)
Nature Struct. Biol.
, vol.6
, pp. 502-504
-
-
Smith, J.L.1
-
46
-
-
0033166241
-
2+-ATPase suggests that a large conformational change initiates P-type ion pump reaction cycles
-
2+-ATPase suggests that a large conformational change initiates P-type ion pump reaction cycles. Curr. Biol. 9:672-679.
-
(1999)
Curr. Biol.
, vol.9
, pp. 672-679
-
-
Stokes, D.L.1
Auer, M.2
Zhang, P.3
Kuehlbrandt, W.4
-
47
-
-
0028179410
-
2+, thapsigargin, AMP-PCP, and Cr-ATP on crystallization
-
2+, thapsigargin, AMP-PCP, and Cr-ATP on crystallization. J. Biol. Chem. 269:11606-11613.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 11606-11613
-
-
Stokes, D.L.1
Lacapere, J.-J.2
-
48
-
-
0024521211
-
The predicted secondary structures of the nucleotide-binding sites of six cation-transporting ATPases lead to a probable tertiary fold
-
Taylor, W. R., and N. M. Green. 1989. The predicted secondary structures of the nucleotide-binding sites of six cation-transporting ATPases lead to a probable tertiary fold. Eur. J. Biochem. 179:241-248.
-
(1989)
Eur. J. Biochem.
, vol.179
, pp. 241-248
-
-
Taylor, W.R.1
Green, N.M.2
-
49
-
-
0017671187
-
The reactivity of the thiol groups of the adenosine triphosphatase of sarcoplasmic reticulum and their location on tryptic fragments of the molecule
-
Thorley-Lawson, D. A., and N. M. Green. 1977. The reactivity of the thiol groups of the adenosine triphosphatase of sarcoplasmic reticulum and their location on tryptic fragments of the molecule. Biochem J. 167: 739-748.
-
(1977)
Biochem J.
, vol.167
, pp. 739-748
-
-
Thorley-Lawson, D.A.1
Green, N.M.2
-
50
-
-
0027512587
-
Three-dimensional cryo-electron microscopy of the calcium ion pump in the sarcoplasmic reticulum membrane
-
Toyoshima, C., H. Sasabe, and D. L. Stokes. 1993. Three-dimensional cryo-electron microscopy of the calcium ion pump in the sarcoplasmic reticulum membrane. Nature. 362:469-471.
-
(1993)
Nature
, vol.362
, pp. 469-471
-
-
Toyoshima, C.1
Sasabe, H.2
Stokes, D.L.3
-
51
-
-
0028356961
-
Photochemical labeling and inhibition of Na, K-ATPase by 2-azido-ATP
-
Tran, C. M., E. E. Huston, and R. A. Farley. 1994. Photochemical labeling and inhibition of Na, K-ATPase by 2-azido-ATP. J. Biol. Chem. 269: 6558-6565.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 6558-6565
-
-
Tran, C.M.1
Huston, E.E.2
Farley, R.A.3
-
52
-
-
0029062630
-
Characterization of the exon structure of the Menkes disease gene using vectorette PCR
-
Turner, Z., B. Vural, T. Tonnesen, J. Chelly, A. P. Monaco, and N. Horn. 1995. Characterization of the exon structure of the Menkes disease gene using vectorette PCR. Genomics. 26:437-442.
-
(1995)
Genomics
, vol.26
, pp. 437-442
-
-
Turner, Z.1
Vural, B.2
Tonnesen, T.3
Chelly, J.4
Monaco, A.P.5
Horn, N.6
-
53
-
-
0021274142
-
Role of divalent cation bound to phosphoenzyme intermediate of sarcoplasmic reticulum ATPase
-
Wakabayashi, S., and M. Shigekawa. 1984. Role of divalent cation bound to phosphoenzyme intermediate of sarcoplasmic reticulum ATPase. J. Biol. Chem. 259:4427-4436.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 4427-4436
-
-
Wakabayashi, S.1
Shigekawa, M.2
-
54
-
-
0032509485
-
32P]ADP) as a photoactivatable probe. Label incorporation before and after blocking the high affinity ATP site with fluorescein isothiocyanate
-
32P]ADP) as a photoactivatable probe. Label incorporation before and after blocking the high affinity ATP site with fluorescein isothiocyanate. J. Biol. Chem. 273:33759-33765.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 33759-33765
-
-
Ward, D.G.1
Cavieres, J.D.2
-
55
-
-
0032486484
-
Photoinactivation of fluorescein isothiocyanate-modified Na, K-ATPase by 2′(3′)-O-(2,4,6-trinitrophenyl)8-azidoadenosine 5′-diphosphate. Abolition of E1 and E2 partial reactions by sequential block of high and low affinity nucleotide sites
-
Ward, D. G., and J. D. Cavieres. 1998b. Photoinactivation of fluorescein isothiocyanate-modified Na, K-ATPase by 2′(3′)-O-(2,4,6-trinitrophenyl)8-azidoadenosine 5′-diphosphate. Abolition of E1 and E2 partial reactions by sequential block of high and low affinity nucleotide sites. J. Biol. Chem. 273:14277-14284.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 14277-14284
-
-
Ward, D.G.1
Cavieres, J.D.2
-
57
-
-
0032560170
-
Structure of the calcium pump from sarcoplasmic reticulum at 8 A resolution
-
Zhang, P., C. Toyoshima, K. Yonekura, N. M. Green, and D. L. Stokes. 1998. Structure of the calcium pump from sarcoplasmic reticulum at 8 A resolution. Nature. 392:835-839.
-
(1998)
Nature
, vol.392
, pp. 835-839
-
-
Zhang, P.1
Toyoshima, C.2
Yonekura, K.3
Green, N.M.4
Stokes, D.L.5
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