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Volumn 51, Issue 6, 2000, Pages 473-486

Evolution of introns and exons of class II major histocompatibility complex genes of vertebrates

Author keywords

Balancing selection; Class II MHC; Intron evolution; Major histocompatibility complex; Recombination

Indexed keywords

DNA; HLA DQ ANTIGEN; HLA DR ANTIGEN; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 2;

EID: 0034020769     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002510050646     Document Type: Article
Times cited : (36)

References (40)
  • 1
    • 0031907173 scopus 로고    scopus 로고
    • Recent origin of HLA-DRB1 alleles and implications for human evolution
    • Bergström TF, Josefsson A, Erlich HA, Gyllensten U (1998) Recent origin of HLA-DRB1 alleles and implications for human evolution. Nat Genet 18:237-242
    • (1998) Nat Genet , vol.18 , pp. 237-242
    • Bergström, T.F.1    Josefsson, A.2    Erlich, H.A.3    Gyllensten, U.4
  • 4
    • 0023251888 scopus 로고
    • A statistical analysis of nucleotide sequences of introns and exons in human genes
    • Bulmer M (1987) A statistical analysis of nucleotide sequences of introns and exons in human genes. Mol Biol Evol 4:395-405
    • (1987) Mol Biol Evol , vol.4 , pp. 395-405
    • Bulmer, M.1
  • 5
    • 0002943417 scopus 로고
    • Comparative methods using phylogenetically independent contrasts
    • Burt A (1989) Comparative methods using phylogenetically independent contrasts. Oxf Surv Evol Biol 6:33-53
    • (1989) Oxf Surv Evol Biol , vol.6 , pp. 33-53
    • Burt, A.1
  • 6
    • 0031447141 scopus 로고    scopus 로고
    • Locus-specific conservation of the HLA class I introns by intra-locus homogenization
    • Cereb N, Hughes AL, Yang SY (1997) Locus-specific conservation of the HLA class I introns by intra-locus homogenization. Immunogenetics 47:30-36
    • (1997) Immunogenetics , vol.47 , pp. 30-36
    • Cereb, N.1    Hughes, A.L.2    Yang, S.Y.3
  • 7
    • 0032922005 scopus 로고    scopus 로고
    • The role of mismatch repair machinery in regulating mitotic and meiotic recombination between diverged sequences in yeast
    • Chen W, Jinks-Robertson S (1999) The role of mismatch repair machinery in regulating mitotic and meiotic recombination between diverged sequences in yeast. Genetics 151:1299-1313
    • (1999) Genetics , vol.151 , pp. 1299-1313
    • Chen, W.1    Jinks-Robertson, S.2
  • 8
    • 0029841328 scopus 로고    scopus 로고
    • Evolution of MHC class II β chain-encoding genes in the Lake Tana barbel species flock (Barbus intermedius complex)
    • Dixon B, Nagelkerke LAJ, Sibbing F, Egberts E, Stet RJM (1996) Evolution of MHC class II β chain-encoding genes in the Lake Tana barbel species flock (Barbus intermedius complex). Immunogenetics 44:419-431
    • (1996) Immunogenetics , vol.44 , pp. 419-431
    • Dixon, B.1    Nagelkerke, L.A.J.2    Sibbing, F.3    Egberts, E.4    Stet, R.J.M.5
  • 9
    • 0016842119 scopus 로고
    • Enhanced immunologic surveillance in mice heterozygous at the H-2 gene complex
    • Doherty PC, Zinkernagel RM (1975) Enhanced immunologic surveillance in mice heterozygous at the H-2 gene complex. Nature 256:50-52
    • (1975) Nature , vol.256 , pp. 50-52
    • Doherty, P.C.1    Zinkernagel, R.M.2
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 11
    • 0028097902 scopus 로고
    • The effects of insertions on mammalian intra-chromosomal recombination
    • Godwin AR, Liskay RM (1994) The effects of insertions on mammalian intra-chromosomal recombination. Genetics 136:607-617
    • (1994) Genetics , vol.136 , pp. 607-617
    • Godwin, A.R.1    Liskay, R.M.2
  • 12
    • 0024843469 scopus 로고
    • Ancient roots for polymorphism at the HLA-DQA locus in primates
    • Gyllensten U, Erlich HA (1989) Ancient roots for polymorphism at the HLA-DQA locus in primates. Proc Natl Acad Sci USA 86:9986-9990
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 9986-9990
    • Gyllensten, U.1    Erlich, H.A.2
  • 14
    • 0029088874 scopus 로고
    • Natural selection on the peptidebinding regions of major histocompatibility complex molecules
    • Hughes AL, Hughes MK (1995) Natural selection on the peptidebinding regions of major histocompatibility complex molecules. Immunogenetics 42:233-243
    • (1995) Immunogenetics , vol.42 , pp. 233-243
    • Hughes, A.L.1    Hughes, M.K.2
  • 15
    • 0023764283 scopus 로고
    • Pattern of nucleotide substitution at MHC class I loci reveals overdominant selection
    • Hughes AL, Nei M (1988) Pattern of nucleotide substitution at MHC class I loci reveals overdominant selection. Nature 235:167-170
    • (1988) Nature , vol.235 , pp. 167-170
    • Hughes, A.L.1    Nei, M.2
  • 16
    • 0040771786 scopus 로고
    • Nucleotide substitution at major histocompatibility complex class II loci: Evidence for overdominant selection
    • Hughes AL, Nei M (1989) Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. Proc Natl Acad Sci USA 86:958-962
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 958-962
    • Hughes, A.L.1    Nei, M.2
  • 17
    • 0032426345 scopus 로고    scopus 로고
    • Natural selection at major histocompatibility complex loci of vertebrates
    • Hughes AL, Yeager M (1998) Natural selection at major histocompatibility complex loci of vertebrates. Annu Rev Genet 32:415-435
    • (1998) Annu Rev Genet , vol.32 , pp. 415-435
    • Hughes, A.L.1    Yeager, M.2
  • 18
    • 0027461057 scopus 로고
    • Contrasting roles of interallelic recombination at the HLA-A and HLA-B loci
    • Hughes AL, Hughes MK, Watkins DI (1993) Contrasting roles of interallelic recombination at the HLA-A and HLA-B loci. Genetics 133:669-680
    • (1993) Genetics , vol.133 , pp. 669-680
    • Hughes, A.L.1    Hughes, M.K.2    Watkins, D.I.3
  • 19
    • 0028782306 scopus 로고
    • Natural selection at the class II major histocompatibility complex loci of mammals
    • Hughes AL, Hughes MK, Howell CY, Nei M (1994) Natural selection at the class II major histocompatibility complex loci of mammals. Phil Trans R Soc Lond B 345:359-367
    • (1994) Phil Trans R Soc Lond B , vol.345 , pp. 359-367
    • Hughes, A.L.1    Hughes, M.K.2    Howell, C.Y.3    Nei, M.4
  • 20
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munro HN (ed), Academic Press, New York
    • Jukes T, Cantor CR (1986) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism, Academic Press, New York
    • (1986) Mammalian Protein Metabolism
    • Jukes, T.1    Cantor, C.R.2
  • 22
    • 0025970149 scopus 로고
    • Inferring the evolutionary histories of the Adh and Adh-dup loci in Drosophila melanogaster from patterns of polymorphism and divergence
    • Kreitman M, Hudson RR (1991) Inferring the evolutionary histories of the Adh and Adh-dup loci in Drosophila melanogaster from patterns of polymorphism and divergence. Genetics 127:565-582
    • (1991) Genetics , vol.127 , pp. 565-582
    • Kreitman, M.1    Hudson, R.R.2
  • 23
    • 0023783672 scopus 로고
    • HLA-A, -B polymorphisms predate the divergence of humans and chimpanzees
    • Lawlor DA, Ward FF, Ennis PD, Jackson AP, Parham P (1988) HLA-A, -B polymorphisms predate the divergence of humans and chimpanzees. Nature 335:268-271
    • (1988) Nature , vol.335 , pp. 268-271
    • Lawlor, D.A.1    Ward, F.F.2    Ennis, P.D.3    Jackson, A.P.4    Parham, P.5
  • 24
    • 0030076124 scopus 로고    scopus 로고
    • Rates of nucleotide substitution in primates and rodents and the generation-time effect hypothesis
    • Li W-H, Ellsworth DL, Krushkall J, Chang BHJ, Hewitt-Emmett D (1996) Rates of nucleotide substitution in primates and rodents and the generation-time effect hypothesis. Mol Phyl Evol 5:182-187
    • (1996) Mol Phyl Evol , vol.5 , pp. 182-187
    • Li, W.-H.1    Ellsworth, D.L.2    Krushkall, J.3    Chang, B.H.J.4    Hewitt-Emmett, D.5
  • 25
    • 0023114469 scopus 로고
    • Homology requirement for efficient gene conversion between duplicated chromosomal sequences in mammalian cells
    • Liskay RM, Leston A, StachelecK JL (1987) Homology requirement for efficient gene conversion between duplicated chromosomal sequences in mammalian cells. Genetics 115:161-167
    • (1987) Genetics , vol.115 , pp. 161-167
    • Liskay, R.M.1    Leston, A.2    Stacheleck, J.L.3
  • 26
    • 0024077349 scopus 로고
    • Nucleotide sequence of chimpanzee MHC class I alleles: Evidence for trans-species mode of evolution
    • Mayer WE, Jonker D, Klein D, Ivanyi P, Seventer G van, Klein J (1988) Nucleotide sequence of chimpanzee MHC class I alleles: evidence for trans-species mode of evolution. EMBO J 7:2765-2774
    • (1988) EMBO J , vol.7 , pp. 2765-2774
    • Mayer, W.E.1    Jonker, D.2    Klein, D.3    Ivanyi, P.4    Van Seventer, G.5    Klein, J.6
  • 27
    • 0027994537 scopus 로고
    • Ancient, highly polymorphic human major histocompatibility complex DQA1 intron sequences
    • McGinnis MD, Lebo RV, Quinn DL, Simons MJ (1994) Ancient, highly polymorphic human major histocompatibility complex DQA1 intron sequences. Am J Med Genet 52:438-444
    • (1994) Am J Med Genet , vol.52 , pp. 438-444
    • McGinnis, M.D.1    Lebo, R.V.2    Quinn, D.L.3    Simons, M.J.4
  • 28
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M, Gojobori J (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3:418-416
    • (1986) Mol Biol Evol , vol.3 , pp. 418-1416
    • Nei, M.1    Gojobori, J.2
  • 29
    • 0024658495 scopus 로고
    • Variances of the average numbers of nucleotide substitutions within and between populations
    • Nei M, Jin L (1989) Variances of the average numbers of nucleotide substitutions within and between populations. Mol Biol Evol 6:447-459
    • (1989) Mol Biol Evol , vol.6 , pp. 447-459
    • Nei, M.1    Jin, L.2
  • 30
    • 0018859479 scopus 로고
    • Non-random association between electromorphs and inversion chromosomes in finite populations
    • Nei M, Li W-H (1980) Non-random association between electromorphs and inversion chromosomes in finite populations. Genet Res 35:65-83
    • (1980) Genet Res , vol.35 , pp. 65-83
    • Nei, M.1    Li, W.-H.2
  • 31
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 33
    • 0027275349 scopus 로고
    • The synonymous substitution rate of the major histocompatibility complex loci in primates
    • Satta Y, O'hUigin C, Takahata N, Klein J (1993) The synonymous substitution rate of the major histocompatibility complex loci in primates. Proc Natl Acad Sci USA 90:7480-7484
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 7480-7484
    • Satta, Y.1    O'hUigin, C.2    Takahata, N.3    Klein, J.4
  • 34
    • 0022689021 scopus 로고
    • Homologous recombination in Escherichia coli: Dependence on substrate length and homology
    • Shen P, Huang HV (1986) Homologous recombination in Escherichia coli: dependence on substrate length and homology. Genetics 112:441-457
    • (1986) Genetics , vol.112 , pp. 441-457
    • Shen, P.1    Huang, H.V.2
  • 35
    • 0031705579 scopus 로고    scopus 로고
    • Mechanism and control of inter-species recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions
    • Stambuk S, Radman M (1998) Mechanism and control of inter-species recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions. Genetics 150:533-542
    • (1998) Genetics , vol.150 , pp. 533-542
    • Stambuk, S.1    Radman, M.2
  • 36
    • 0022410317 scopus 로고
    • Statistical methods of DNA sequence analysis: Detection of intragenic recombination or gene conversion
    • Stephens JC (1985) Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion. Mol Biol Evol 2:539-556
    • (1985) Mol Biol Evol , vol.2 , pp. 539-556
    • Stephens, J.C.1
  • 37
    • 0020641432 scopus 로고
    • Expected linkage disequilibrium for a neutral locus linked to a chromosomal rearrangement
    • Strobeck C (1983) Expected linkage disequilibrium for a neutral locus linked to a chromosomal rearrangement. Genetics 103:545-555
    • (1983) Genetics , vol.103 , pp. 545-555
    • Strobeck, C.1
  • 38
    • 0025255468 scopus 로고
    • Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci
    • Takahata N, Nei M (1990) Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics 124:967-978
    • (1990) Genetics , vol.124 , pp. 967-978
    • Takahata, N.1    Nei, M.2
  • 39
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 40
    • 0024497416 scopus 로고
    • Mutation rates differ among regions of the mammalian genome
    • Wolfe KH, Sharp PM, Li W-H (1989) Mutation rates differ among regions of the mammalian genome. Nature 337:283-285
    • (1989) Nature , vol.337 , pp. 283-285
    • Wolfe, K.H.1    Sharp, P.M.2    Li, W.-H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.