Structure of the O polysaccharide and serological classification of Pseudomonas syringae pv. ribicola NCPPB 1010

European Journal of Biochemistry

Volumn 267, Issue 8, 2000, Pages 2372-2379

  Ovod, Vladimir V ^a   Zdorovenko, Evelina L ^b   Shashkov, Aleksander S ^b   Kocharova, Nina A ^b   Knirel, Yuriy A ^b  

^a UNIVERSITY OF TAMPERE   (Finland)

^b N D ZELINSKY INSTITUTE OF ORGANIC CHEMISTRY   (Russian Federation)

Author keywords

Classification; Lipoposaccharide; O polysaccharide; O repeat; Pseudomonas syringae

Indexed keywords

BACTERIAL POLYSACCHARIDE;

ANTIBODY PRODUCTION; ARTICLE; CARBON NUCLEAR MAGNETIC RESONANCE; CHEMICAL STRUCTURE; CLASSIFICATION; CROSS REACTION; METHYLATION; NONHUMAN; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; PSEUDOMONAS SYRINGAE; SEROLOGY; STRUCTURE ANALYSIS;

CARBOHYDRATE CONFORMATION; CARBOHYDRATE SEQUENCE; LIPOPOLYSACCHARIDES; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR SEQUENCE DATA; MONOSACCHARIDES; O ANTIGENS; POLYSACCHARIDES, BACTERIAL; PSEUDOMONAS; SEROTYPING;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PSEUDOMONAS; PSEUDOMONAS SYRINGAE; PSEUDOMONAS SYRINGAE PV. RIBICOLA;

EID: 0034010785     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1432-1327.2000.01250.x     Document Type: Article

References (34)

1. 1. Young, J.M., Saddler, G.S., Takikawa, Y., DeBoer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I. & Stead, D.E. (1996) Names of plant pathogenic bacteria 1864-1995. ISPP Subcommittee on Taxonomy of Plant Pathogenic Bacteria. Rev. Plant Pathol. 75, 721-763.
2. 2. Gardan, L., Shafik, H., Belouin, S., Brosch, R., Grimont, F. & Grimont, P.A.D. (1999) DNA relatedness among the pathovars of P. syringae and description of Pseudomonas tremae sp. nov. & Pseudomonas cannabina sp. nov. (ex. Sutic and Dowson 1959). Int. J. Syst. Bacteriol. 49, 469-478.
3. 3. Ovod, V., Ashorn, P., Yakovleva, L. & Krohn, K. (1995) Classification of Pseudomonas syringae with monoclonal antibodies against the core and O-side chains of the lipopolysaccharide. Phytopathology 85, 226-232.
4. 4. Ovod, V., Rudolph, K. & Krohn, K. (1997) Serological classification of Pseudomonas syringae pathovars based on monoclonal antibodies towards the lipopolysaccharide O-chains. In Pseudomonas Syringae Pathovars and Related Pathogens (Rudolph, K., Burr, T.J., Mansfield, J.W., Stead, D., Vivian, A. & von Kietzell, J., eds), pp. 526-531. Kluwer Academic Press. Dordrecht-Boston-London.
5. 5. Knirel, Y.A., Ovod, V.V., Zdorovenko, G.M., Gvozdyak, R.I. & Krohn, K.J. (1998) Structure of the O polysaccharide and immunochemical relationships between the lipopolysaccharides of Pseudomonas syringae pathovar tomato and pathovar maculicola. Eur. J. Biochem. 258, 657-661.
6. 6. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Mamyan, S.S., Gubanova, N.Y. & Solyanik, L.P. (1988) Antigenic polysaccharides of bacteria. 30. Structure of the polysaccharide chain of the Pseudomonas syringae pv. syringae 281 (serogroup I) lipopolysaccharide. Bioorg. Khim. 14, 180-186.
7. 7. Knirel, Y.A., Shashkov, A.S., Paramonov, N.A., Zdorovenko, G.M., Solyanik, L.P. & Yakovleva, L.M. (1993) Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of Pseudomonas syringae pv. tomato 140 (R). Carbohydr. Res. 243, 199-204.
8. 8. Knirel, Y.A. & Zdorovenko, G.M. (1997) Structures of O-polysaccharide chains of lipopolysaccharides as the basis for classification of Pseudomonas syringae and related strains. In Pseudomonas Syringae Pathovars and Related Pathogens (Rudolph, K., Burr, T.J., Mansfield, J.W., Stead, D., Vivian, A. & von Kietzell, J., eds), pp. 475-480. Kluwer Academic Press. Dordrecht-Boston-London.
9. 9. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Yakovleva, L.M., Gubanova, N.Y. & Gvozdyak, R.I. (1988) Antigenic polysaccharides of bacteria. 29. Structure of the O-specific polysaccharide chain of the Pseudomonas holci 8300 (serogroup I) lipopolysaccharide. Bioorg. Khim. 14, 172-179.
10. 10. Charnock, C. (1998) Characterization of the phytopathogen Pseudomonas syringae pathovar ribicola NCPPB 963. Microbios 94, 23-34.
11. 11. Ovod, V, Knirel, Y.A., Samson, R. & Krohn, K. (1999) Immunochemical characterization and taxonomic evaluation of the O polysaccharides of the lipopolysaccharides of Pseudomonas syringae strains from serogroup O1. J. Bacteriol. 181, 6937-6947.
12. 12. Sawardeker, J.S., Sloneker, J.H. & Jeanes, A. (1965) Quantitative determination of monosaccharides as their alditol acetates by gas liquid chromatography. Anal. Chem. 37, 1602-1603.
13. 13. Leontein, K., Lindberg, B. & Lönngren, J. (1978) Assignment of absolute configuration of sugars by g.l.c. of their acetylated glycosides formed from chiral alcohols. Carbohydr. Res. 62, 359-362.
14. 14. Gerwig, G.J., Kamerling, J.P. & Vliegenthart, J.F.G. (1979) Determination of the absolute configuration of monosaccharides in complex carbohydrates by capillary g.l.c. Carbohydr. Res. 77, 1-7.
15. 15. Shashkov, A.S., Senchenkova, S.N., Nazarenko, E.L., Zubkov, V.A., Gorshkova, N.M., Knirel, Y.A. & Gorshkova, R.P. (1997) Structure of a phosphorylated polysaccharide from Shewanella putrefaciens strain S29. Carbohydr. Res. 303, 333-338.
16. 16. Ciucanu, I. & Kerek, F. (1984) A simple and rapid method for the permethylation of carbohydrates. Carbohydr. Res. 131, 209-217.
17. 17. Jansson, P.-E., Kenne, L., Liedgren, H., Lindberg, B. & Lönngren, J. (1976) A practical guide to the methylation analysis of carbohydrates. Chem. Commun. University Stockholm 8, 1-75.
18. 18. Stellner, K., Saito, H. & Hakomori, S.-I. (1973) Determination of aminosugar linkages in glycolipids by methylation. Aminosugar linkages of ceramide pentasaccharides of rabbit erythrocytes and of Forssman antigen. Arch. Biochem. Biophys. 155, 464-472.
19. 19. Knirel, Y.A., Ovod, V.V., Paramonov, N.A. & Krohn, K. (1998) Heterogeneity in the O polysaccharide structure of Pseudomonas syringae pv. coriandricola GSPB 2028 (W-43). Eur. J. Biochem. 258, 716-721.
20. 20. Zdorovenko, E.L., Ovod, V.V., Shashkov, A.S., Kocharova, N.A., Knirel, Y.A. & Krohn, K. (1999) Structure of the O-polysaccharide of the lipopolysaccharide of Pseudomonas syringae pv. garcae ICMP 8047. Biochemistry (Moscow) 64, 914-923. (English Translation) 64, 765-773).
21. 20. Zdorovenko, E.L., Ovod, V.V., Shashkov, A.S., Kocharova, N.A., Knirel, Y.A. & Krohn, K. (1999) Structure of the O-polysaccharide of the lipopolysaccharide of Pseudomonas syringae pv. garcae ICMP 8047. Biochemistry (Moscow) 64, 914-923. (English Translation) 64, 765-773).
22. 13C-n.m.r. data. Carbohydr. Res. 188, 169-191.
23. 13C-n.m.r. data. Carbohydr. Res. 175, 59-75.
24. 23. Jann, K. & Jann, B. (1984) Structure and biosynthesis of O-antigen. In Handbook of Endotoxin, Vol. 1, Chemistry of Endotoxin (Rietschel, E.T., ed.), pp. 138-186. Elsevier, Amsterdam.
25. 24. Reeves, P. (1993) Evolution of Salmonella O antigen variation by interspecific gene transfer on a large scale. Trends Genet. 9, 17-22.
26. 25. Whitfield, C. (1995) Biosynthesis of lipopolysaccharide O antigens. Trends Microbiol. 3, 178-185.
27. 26. Reeves, P.R., Hobbs, M., Valvano, M.A., Skurnik, M., Whitfield, C., Coplin, D., Kido, N., Klena, J., Maskell, D., Raetz, C.R.H. & Rick, P.D. (1996) Bacterial polysaccharide synthesis and gene nomenclature. Trends Microbiol. 4, 495-503.
28. 27. Burrows, L.L., Charter, D.F. & Lam, J.S. (1996) Molecular characterization of the Pseudomonas aeruginosa serotype O5 (PAO-1) B-band lipopolysaccharide gene cluster. Mol. Microbiol. 3, 481-495.
29. 28. Mamat, U., Seydel, U., Grimmecke, D., Holst, O. & Rietschel, E.T. (1999) Lipopolysaccharides, in Comprehensive Natural Products Chemistry, Vol. 3, Carbohydrates and Their Derivatives Including Tannins, Cellulose, and Related Lignins (Pinto, B.M., ed.), pp. 179-239. Elsevier. Amsterdam.
30. 29. Ovod, V., Rudolph, K., Knirel, Y.A. & Krohn, K. (1996) Immunochemical characterization of O polysaccharides composing the α-D-rhamnose backbone of lipopolysaccharide of Pseudomonas syringae and classification of bacteria into serogroups O1 and O2 with monoclonal antibodies. J. Bacteriol. 178, 6459-6465.
31. 30. Smith, A.R.W., Zamze, S.E., Munro, S.M., Carter, K.J. & Hignett, R.C. (1985) Structure of the sidechain of lipopolysaccharide from Pseudomonas syringae pv. morsprunorum C28. Eur. J. Biochem. 149, 73-78.
32. 31. Zdorovenko, G.M., Shashkov, A.S., Zdorovenko, E.L., Kocharova, N.A., Yakovleva, L.M., Knirel, Y.A. & Rudolph, K. (2000) Characterization of the lipopolysaccharide and structure of the O-specific polysaccharide of the bacterium Pseudomonas syringae pv. atrofaciens IMV 948. Biochemistry (Moscow), in press.
33. 32. Knirel, Y.A., Zdorovenko, G.M., Paramonov, N.A., Veremeychenko, S.N., Toukach, F.V. & Shashkov, A.S. (1996) Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of the reference strain for Pseudomonas fluorescens (IMV 4125, ATCC 13525, biovar A). Carbohydr. Res. 291, 217-224.
34. 33. Saunier, M., Malandrin, L. & Samson, R. (1996) Distribution of Pseudomonas syringae pathovars into twenty-three O serogroups. Appl. Environ. Microbiol. 62, 2360-2374.34.