Mitochondrial cytochrome b gene analysis of Aspergillus fumigatus and related species

Journal of Clinical Microbiology

Volumn 38, Issue 4, 2000, Pages 1352-1358

  Wang, Li ^a   Yokoyama, Koji ^a   Miyaji, Makoto ^a   Nishimura, Kazuko ^a  

^a CHIBA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B;

AMINO ACID SEQUENCE; ARTICLE; ASPERGILLUS FUMIGATUS; CONTROLLED STUDY; DNA SEQUENCE; FUNGUS IDENTIFICATION; MITOCHONDRION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; STRAIN DIFFERENCE;

ASPERGILLUS BREVIPES; ASPERGILLUS DURICAULIS; ASPERGILLUS FUMIGATUS; ASPERGILLUS FUMIGATUS VAR. ALBUS; ASPERGILLUS FUMIGATUS VAR. ELLIPTICUS; ASPERGILLUS FUMIGATUS VAR. FUMIGATUS; ASPERGILLUS FUMISYNNEMATUS; ASPERGILLUS NEOELLIPTICUS; ASPERGILLUS UNILATERALIS; ASPERGILLUS VIRIDINUTANS; ELLIPTICUS; FUNGI; NEOSARTORYA; NEOSARTORYA FISCHERI; NEOSARTORYA STRAMENIA;

EID: 0034001358     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.38.4.1352-1358.2000     Document Type: Article

References (38)

1. Aquadro, C. F., and B. D. Greenberg. 1983. Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals. Genetics 103:287-312.
2. Baedana, E. J. 1980. The clinical specturum of aspergillosis. Part 1. Epidemiology, pathogenicity, infection in animals and immunology of Aspergillus. Crit. Rev. Lab. Sci. 13:21-83.
3. Barnes, A. J., and D. W. Denning. 1993. Aspergillus - significance as a pathogen. Rev. Med. Microbiol. 4:176-180.
4. Brillinger. G. U., W. Heberle, B. Weber, and H. Achenbach. 1978. Metabolic products of microorganisms. 167. Cyclopaldic acid from Aspergillus duricaulis. 1. Production, isolation and biological properties. Arch. Microbiol. 116:245-252.
5. Brown, W. M., M. George, Jr., and A. C. Wilson. 1979. Rapid evolution of animal mitochondrial DNA. Proc. Natl. Acad. Sci. USA 76:1967-1971.
6. Burnie, J. P., A. Coke, and R. C. Matthews. 1992. Restriction endonuclease analysis of Aspergillus fumigatus DNA. J. Clin. Pathol. 45:324-327.
7. Chikuni, K., N. Minaka, and H. Ikenaga. 1996. Molecular phylogeny of some Passeriformes, based on cytochrome b sequences. J. Yamashina Inst. Ornithol. 28:1-8.
8. Chikuni, K., Y. Mori, T. Tabata, M. Saito, M. Monma, and M. Kosugiyama. 1995. Molecular phylogeny based on th κ-casein and cytochrome b sequences in the mammalian soborder Ruminsntia. J. Mol. Evol. 41:859-866.
9. Croft, J. H., and J. Varga. 1994. Application of RFLPs in systematics and population genetics of Aspergilli, p. 277-289. In K. A. Powell et al. (ed.), The genus Aspergillus. Plenum Press, New York, N.Y.
10. Debeaupuis, J. P., P. Sarfati, A. Goris, D. Stynen, M. Diaquin, and J. P. Latge. 1990. Exocellular polysaccharides of Aspergillus fumigatus and related taxa, p. 309-320. In R. A. Samson and J. I. Pitt (ed.), Modern concepts in Penicillium and Aspergillus classification. Plenum Press, New York, N.Y.
11. Denning, D. W., S. Follansbee, M. Scolaro, S. Norris, D. Edelstein, and D. A. Stevens. 1991. Pulmonary aspergillosis in AJDS. N. Engl. J. Med. 324:654-662.
12. Edwards, S. V., and A. C. Wilson. 1990. Phylogenetically informative length polymorphism and sequence variability in mitochondrial DNA of Australian songbirds (Pomatostomus). Genetics 126:695-711.
13. Edwards, S. V., P. Arctander, and A. C. Wilson. 1991. Mitochondrial resolution of a deep branch in the genealogical tree for perching birds. Proc. R. Soc. London Ser. B 243:99-107.
14. Fanti, F., S. Conti, L. Campani, G. Morace, G. Dettori, and L. Polonelli. 1989. Studies on the epidemiology of Aspergillus fumigatus infections in a university hospital. Eur. J. Epidemiol. 5:8-14.
15. Frisvad, J. C., and R. A. Samson. 1990. Chemotaxonomy and morphology of Aspergillus fumigatus and related taxa, p. 201-208. In R. A. Samson and J. I. Pitt (ed.), Modern concepts in Penicillium and Aspergillus classification. Plenum Press, New York, N.Y.
16. Geber, J., J. Chomicki, J. W. Brandsberg, K. Jones, and K. J. Hammerman. 1973. Pulmonary aspergillosis caused by A. fischeri var. spinosus. Am. J. Clin. Pathol. 60:861-866.
17. Geiser, D. M., J. C. Frisvad, and J. W. Taylor. 1998. Evolutionary relationships in Aspergillus section Fumigati inferred from partial β-tubulin and hydrophobin DNA sequences. Mycologia 90:831-845.
18. Goriglione, G., G. Stella, L. Gafa, G. Spata, S. Oliveri, A. A. Padhye, and L. Ajello. 1990. Neosartorya fischen var. fischen (Wehmer) Malloch and Cain 1972 (anamorph Aspergillus fischerianus Samson and Gams 1985) as a cause of mycotic keratitis. Eur. J. Epidemiol. 6:382-385.
19. Horie, Y., M. Miyaji, K. Nishimura, H. Taguchi, and S. Udagawa. 1993. Aspergillus fumisynnematus, a new species from Venezuelan soil. Trans. Mycol. Soc. Jpn. 34:3-7.
20. Irwin, D. M., T. D. Kocher, and A. C. Wilson. 1991. Evolution of the cytochrome b gene of mammals. J. Mol. Evol. 32:128-144.
21. Kocher, T. D., W. K. Thomas, A. Meyer, S. V. Edwards, S. Paabo, F. X. Villabianca, and A. C. Wilson. 1989. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc. Natl. Acad. Sci. USA 86:6196-6200.
22. Kozakiewicz, Z. 1989. Aspergillus species on the stored products. Mycol. Pap. 161:1-188.
23. Krajewski, C., A. C. Driskell, P. R. Baverstock, and M. J. Braun. 1992. Phylogenetic relationships of the thylacine (Mammalia: Thylacinidae) among dasyuroid marsupials: evidence from cytochrome b DNA sequences. Proc. R. Soc. London Ser. B 250:19-27.
24. Leslie, L. E., B. Flannigan, and L. J. R. Milner. 1988. Morphological studies on clinical isolates of Aspergillus fumigatus. J. Med. Vet. Mycol. 26:335-341.
25. Naruya, S. 1991. Statistical methods for phylogenetic tree reconstruction, p. 317-346. In C. R. Rao and R. Chakraborty (ed.), Handbook of statistics, vol. 8. Elsevier Science Publishers B.V., Amsterdam, The Netherlands.
26. Naruya, S. 1996. Reconstruction of gene trees from sequence data. Methods Enzymol 266:427-449.
27. Nei, M. 1985. Human evolution at the molecular level, p. 41-64. In T. Ohta and K. Aoki (ed.), Population genetics and molecular evolution. Japan Scientific Society Press/Springer-Verlag, Berlin, Germany.
28. Nei, M. 1987. Phylogenetic trees, p. 287-326. In M. Nei (ed.), Molecular evolutionary genetics. Columbia University Press, New York, N.Y.
29. Padhye, A. A., J. H. Godfrey, F. W. Chandler, and S. W. Peterson. 1994. Osteomyelitis caused by Neosartorya pseudofischeri. J. Clin. Microbiol. 32: 2832-2836.
30. Peterson, S. W. 1992. Neosartorya pseudofischeri sp. nov. and its relationship to other species in Aspergillus section Fumigati. Mycol. Res. 96:547-554.
31. Raper, K. B., and D. I. Fennell. 1965. The Aspergillus fumigatus group, p. 238-268. In K. B. Raper and D. I. Fennell (ed.), The genus of Aspergillus. The Williams & Wilkins Co., Baltimore, Md.
32. Ruvolo, M., T. R. Disotell, M. W. Allard, W. M. Brown, and R. L. Honeycutt. 1991. Resolution of the African hominoid trichotomy by use of a mitochondrial gene sequence. Proc. Natl. Acad. Sci. USA 88:1570-1574.
33. Samson, R. A. 1994. Current systematics of the genus Aspergillus, p. 261-276. In K. A. Powell et al. (ed.), The genus Aspergillus. Plenum Press, New York, N.Y.
34. Udagawa, S., H. Tsubouchi, and N. Toyazaki. 1996. Isolation and identification of Neosartorya species from house dust as hazardous indoor pollutants. Mycoscience 37:217-222.
35. Urata, T., M. Kohayashi, J. Imamura, Y. Tanaka, H. Muneishi, Y. Iwahara, Y. Uemura, H. Taguchi, and I. Miyoshi. 1997. Polymerase chain reaction amplification of AspfI and alkaline protease genes from fungus balls: clinical application in pulmonary aspergillosis. Int. Med. 36:19-27.
36. Wang, L., K. Yokoyama, M. Miyaji, and K. Nishimura. 1998. The identification and phylogenetic relationship of pathogenic species of Aspergillus based on the mitochondrial cytochrome b gene. Med. Mycol. 36:153-164.
37. Watson, J. D., M. Gilman, J. Witkowski, and M. Zoller. 1991. Mitochondrial DNA as a molecular clock, p. 446-447. In J. D. Watson, M. Gilman, J. Witkowski, and M. Zoller (ed.), Recombinant DNA, 2nd ed. W. H. Freeman & Co., New York, N.Y.
38. Weisleder, D., and E. B. Lillehoj. 1971. Structure of viriditoxin, a toxic metabolite of Aspergillus viridinutans. Tetrahedron Lett. 48:4705-4706.