Phylogenetic analyses of the constituents of Type III protein secretion systems

Journal of Molecular Microbiology and Biotechnology

Volumn 2, Issue 2, 2000, Pages 125-144

  Nguyen, Lily ^a,d   Paulsen, Ian T ^b,d   Tchieu, Jason ^d   Hueck, Christoph J ^c,d   Saier Jr , Milton H ^d  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^c J CRAIG VENTER INSTITUTE   (United States)

^d CREATOGEN GmbH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; PILIN; RIBOSOME RNA;

AMINO ACID SEQUENCE; BACTERIOPHAGE; BACTERIUM; BACTERIUM COMPETENCE; FLAGELLUM; NODULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PROTEIN ANALYSIS; PROTEIN SECRETION; REVIEW; UNINDEXED SEQUENCE;

BACTERIAL PROTEINS; GENES, BACTERIAL; GRAM-NEGATIVE BACTERIA; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; VIRULENCE;

BACTERIA (MICROORGANISMS); EUKARYOTA; NEGIBACTERIA; PROKARYOTA;

EID: 0034001159     PISSN: 14641801     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (39)

1. Anderson, D M , Fout, D E , Collmer, A , and Schneewind, O 1999 Reciprocal secretion of proteins by the bacterial type III machines of plant and animal pathogens suggests universal recognition of mRNA targeting signals Proc Natl Acad Sci USA 96 12839-12843
2. Bonas, U 1994 hrp genes of phytopathogenic bacteria Curr Top Microbiol Immunol 192 79-98
3. Buchneser, C , Brosch, R , Bach, S , Guiyoule, A , and Carniel, E 1998 The high-pathogenicity island of Yersinia pseudotuberculosis can be inserted into any of the three chromosomal asn tRNA genes Mol Microbiol 30 965-978
4. Chen, Y, Smith M R , Thirumalai, K , and Zychlinsky, A 1996 A bacterial invasin induces macrophage apoptosis by binding directly to ICE. Embo J 15 3853-3860
5. Cheng, L W, and Schneewind, O 1999 Yersinia enterocolitica type III secretion On the role of SycE in targeting YopE into HeLa cells J Biol Chem 274 22102-22108
6. Collmer A, and Bauer, D W 1994 Erwinia chrysanthemi and Pseudomonas syringae plant puthogens trafficking in extracellular virulence proteins Curr Top Microbiol Immunol 192 43-78
7. Feng D F , and Doolittle, R F 1990 Progressive alignment and phylogenetic tree construction of protein sequences Meth Enzymol 183 375-387.
8. Franco, A A , Cheng, R K , Chung, G T, Wu, S , Oh, H B , and Sears, C L. 1999 Molecular evolution of the pathogenicity island of enterotoxigenic Bacteroides fragilis strains J Bacteriol 181 6623-6633
9. Frithz-Lindsten, F , Du, Y , Rosqvist, R ,and Forsberg, A 1997 Intracellular targeting of exoenzyme S of Pseudomoucis aeruginosa via type III-dependent translocation induces phagocytosis resistance, cytotoxicity and disruption of actin microfilaments Mol Microbiol 25 1125-1139
10. Fu, Y , and Galán, J F 1998 The Salmonella typhimurium tyrosine phosphatase SptP is translocated into host cells and disrupts the actin cytoskeleton Mol Microbiol 27 359-68
11. Galán, J E., and Collmer, A 1999 Type III secretion machines bacterial devices for protein delivery into host cells Science 284 1322-1328
12. Galyov, E.E., Hakansson, S , Forsberg, A , and Wolf-Watz, H 1993 A secreted protein kinase of Yersinia pseudotuberculosis is an indispensable virulence determinant Nature 361 730-732
13. Groisman, F A , and Ochman, H 1993 Cognate gene clusters govern invasion of host epithelial cells by Salmonella typhimunum and Shigella flexneri. EMBO J 12 3779-3787
14. Groisman, E A , and Ochman, H 1997 How Salmonella became a pathogen Trends Microbiol 5 343-349
15. Guan, K L , and Dixon, J E 1990 Protein tyrosine phosphatase activity of an essential virulence determinant in Yersinia Science 249 553-556
16. Guilvout, I , Hardie, K R , Sauvonnet, N , and Pugsley, A P 1999 Genetic dissection of the outer membrane secretin PuID are there distinct domains for multimerization and secretion specificity? J Bacteriol 181:7212-7220
17. Hardt, W D , Chen L M , Schuebel, KE , Bustelo, X R , and Galán, J E 1998 S typhimurium encodes an activator of Rho GTPases that induces membrane ruffling and nuclear responses in host cells Cell 93 815-826
18. Hermant, D , Menard, R , Arricau, N , Parsot, C , and Popoff, M Y 1995 Functional conservation of the Salmonella and Shigella effectors of entry into epithelial cells Mol Microbiol 17 781-789
19. Hueck, C J 1998 Type III protein secretion systems in bacterial pathogens of animals and plants Microbiol Mol Biol Rev 62 379-433
20. Karaolis D K , Sornara, S , Maneval, D R , Jr , Johnson, J A , and Kaper, J B 1999 A bacteriophage encoding a pathogenicity island, a type-IV pilus and a phage receptor in cholera bacteria Nature 399 375-379
21. Lee, C A 1996 Pathogenicity islands and the evolution of bacterial pathogens Infect Agents Dis 5 1-7
22. Lee, C A 1997 Type III secretion systems machines to deliver bacterial proteins into eukaryotic cells? Trends Microbiol. 5 148-156
23. Lee, V.T , and Schneewind, O 1999 Type III machines of pathogenic yersiniae secrete virulence factors into the extracellular milieu Mol Microbiol. 31 1619-1629
24. MacNab, R M 1999 The bacterial flagellum reversible rotary propellor and type III export apparatus J. Bacteriol 181 7149-7153
25. Marciano D K., Russel, M , and Simon, S M. 1999 An aqueous channel for filamentous phage export Science 284 1516-1519
26. Mirold, S , Rabsch, W, Rohde, M , Stender, S , Tschape, H , Russmann, H , Igwe E., and Hardt, W D 1999 Isolation of a temperate bacteriophage encoding the type III effector protein SopE from an epidemic Salmonella typhimurium strain Proc Natl Acad Sci USA 96. 9845-9850
27. Mudgett, M B., and Staskawicz, B J 1998 Protein signaling via type III secretion pathways in phytopathogenic bacteria Curr Opin Microbiol 1 109-114
28. Norris, F A , Wilson, M P , Wallis, T.S , Galyov, E.E , and Majerus, P W. 1998 SopB, a protein required for virulence of Salmonella dublin, is an inositol phosphate phosphatase Proc Natl Acad Sci USA 95 14057-14059
29. Nouwen, N , Ranson, N , Saibil, H , Wolpensinger, B , Engel A , Ghazi, A , and Pugsley, A P 1999 Secretin PuID association with pilot PuIS, structure, and ion-conducting channel formation Proc Natl Acad Sci USA 96 8173-8177
30. Olsen G J , Woese, C R , and Overbeek, R 1994 The winds of evolutionary change breathing new life into microbiology J Bacteriol 176 1-6
31. Rosqvist, R , Forsberg, A , and Wolf-Watz, H 1991 Intracellular targeting of the Yersinia YopE cytotoxin in mammalian cells induces actin microfilament disruption Infect Immun 59 4562-4569
32. Rosqvist, R , Håkansson, S , Forsberg, Å, and Wolf-Watz, H. 1995 Functional conservation of the secretion and translocation machinery for virulence proteins of yersiniae, salmonellae and shigellae EMBO J 14-4187-4195
33. Rossier, O , Wengelnik, K , Hahn, K., and Bonas, U 1999 The Xanthomonas Hrp type III system secretes proteins from plant and mammalian bacterial pathogens Proc Natl Acad Sci USA 96 9368-9373
34. Saier, M H , Jr 1998 Molecular phylogeny as a basis for the classification of transport proteins from bacteria, archaea and eukarya In Advances in Microbial Physiology R. K. Poole, ed Academic Press, San Diego, CA p 81-136.
35. Saier, M H , Jr. 1999 Genome archeology leading to the characterization and classification of transport proteins Curr Opin Microbiol, in press
36. Spiik, A K , Meijer, L K , Ridderstad, A , and Pettersson, S 1999 Interference of eukaryotic signalling pathways by the bacteria Yersinia outer protein YopJ Immunol Lett 68 199-203
37. Thompson J D., Gibson, TJ., Plewniak, F, Jeanmougin, F, and Higgins, D G 1997 The CLUSTAL_X windows interface flexible strategies for multiple sequence alignment aided by quality analysis tools Nucl Acids Res 25 4876-4882
38. Wachter, C , Beinke, C , Mattes, M , and Schmidt, M A 1999 Insertion of EspD into epithelial target cell membranes by infecting enteropathogenic Escherichia coli Mol Microbiol 31:1695-1707
39. Young, G M Schmiel, D H , and Miller, V L 1999 A new pathway for the secretion of virulence factors by bacteria the flagellar export apparatus functions as a protein-secretion system Proc Natl Acad Sci USA 96 6456-6461