-
1
-
-
0030911051
-
Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals
-
Abovich N, Rosbash M. 1997. Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89:403-412.
-
(1997)
Cell
, vol.89
, pp. 403-412
-
-
Abovich, N.1
Rosbash, M.2
-
2
-
-
0023700865
-
Unusual branch point selection involved in the splicing of the alternatively processed Calcitonin/CGRP-I pre-mRNA
-
Adema GJ, Bovenberg RAL, Jansz HS, Baas PD. 1988. Unusual branch point selection involved in the splicing of the alternatively processed Calcitonin/CGRP-I pre-mRNA. Nucleic Acids Res 16:9513-9526.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 9513-9526
-
-
Adema, G.J.1
Bovenberg, R.A.L.2
Jansz, H.S.3
Baas, P.D.4
-
3
-
-
0022974809
-
Sequence requirements for splicing of higher eukaryotic nuclear pre-mRNA
-
Aebi M, Hornig H, Padgett RA, Reiser J, Weissmann C. 1986. Sequence requirements for splicing of higher eukaryotic nuclear pre-mRNA. Cell 47:555-565.
-
(1986)
Cell
, vol.47
, pp. 555-565
-
-
Aebi, M.1
Hornig, H.2
Padgett, R.A.3
Reiser, J.4
Weissmann, C.5
-
4
-
-
0030802754
-
Bimolecular exon ligation by the human spliceosome
-
Anderson K, Moore MJ. 1997. Bimolecular exon ligation by the human spliceosome. Science 276:1712-1716.
-
(1997)
Science
, vol.276
, pp. 1712-1716
-
-
Anderson, K.1
Moore, M.J.2
-
5
-
-
0032521186
-
A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition
-
Berglund JA, Abovich N, Rosbash M. 1998. A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition. Genes & Dev 12:858-867.
-
(1998)
Genes & Dev
, vol.12
, pp. 858-867
-
-
Berglund, J.A.1
Abovich, N.2
Rosbash, M.3
-
6
-
-
0030696675
-
The splicing factor BBP interacts specifically with the pre-mRNA branch-point sequence UACUAAC
-
Berglund JA, Chua K, Abovich N, Reed R, Rosbash M. 1997. The splicing factor BBP interacts specifically with the pre-mRNA branch-point sequence UACUAAC. Cell 89:781-787.
-
(1997)
Cell
, vol.89
, pp. 781-787
-
-
Berglund, J.A.1
Chua, K.2
Abovich, N.3
Reed, R.4
Rosbash, M.5
-
7
-
-
0001468848
-
Splicing of precursors to mRNA by spliceosomes
-
Gesteland RF, Cech TR, Atkins JF, eds. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
-
Burge CB, Tuschl T, Sharp PA. 1999. Splicing of precursors to mRNA by spliceosomes. In: Gesteland RF, Cech TR, Atkins JF, eds. The RNA world. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press, pp 525-560.
-
(1999)
The RNA World
, pp. 525-560
-
-
Burge, C.B.1
Tuschl, T.2
Sharp, P.A.3
-
8
-
-
0031299450
-
Functional crosstalk between exon enhancers, polypyrimidine tracts and branchpoint sequences
-
Buvoli M, Mayer SA, Patton JG 1997. Functional crosstalk between exon enhancers, polypyrimidine tracts and branchpoint sequences. EMBO J 16:7174-7183.
-
(1997)
EMBO J
, vol.16
, pp. 7174-7183
-
-
Buvoli, M.1
Mayer, S.A.2
Patton, J.G.3
-
9
-
-
0024404487
-
The 216-nucleotide intron of the E1A pre-mRNA contains a hairpin structure that permits utilization of unusually distant branch acceptors
-
Chebli K, Gattoni R, Schmitt P, Hildwein G, Stevenin J. 1989. The 216-nucleotide intron of the E1A pre-mRNA contains a hairpin structure that permits utilization of unusually distant branch acceptors. Mol Cell Biol 9:4852-4861.
-
(1989)
Mol Cell Biol
, vol.9
, pp. 4852-4861
-
-
Chebli, K.1
Gattoni, R.2
Schmitt, P.3
Hildwein, G.4
Stevenin, J.5
-
10
-
-
0029894931
-
Identification of proteins that interact with exon sequences, splice sites and the branchpoint sequence during each stage of spliceosome assembly
-
Chiara MD, Gozani O, Bennett M, Champion-Arnaud P, Palandjian L, Reed R. 1996. Identification of proteins that interact with exon sequences, splice sites and the branchpoint sequence during each stage of spliceosome assembly. Mol Cell Biol 16:3317-3326.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 3317-3326
-
-
Chiara, M.D.1
Gozani, O.2
Bennett, M.3
Champion-Arnaud, P.4
Palandjian, L.5
Reed, R.6
-
11
-
-
0030857005
-
Functional analysis of the polypyrimidine tract in pre-mRNA splicing
-
Coolidge CJ, Seely RJ, Patton JG. 1997. Functional analysis of the polypyrimidine tract in pre-mRNA splicing. Nucleic Acids Res 25:888-896.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 888-896
-
-
Coolidge, C.J.1
Seely, R.J.2
Patton, J.G.3
-
13
-
-
0028858388
-
Inefficient spliceosome assembly and abnormal branch site selection in splicing of an HIV-1 transcript in vitro
-
Dyhr-Mikkelsen H, Kjems J. 1995. Inefficient spliceosome assembly and abnormal branch site selection in splicing of an HIV-1 transcript in vitro. J Biol Chem 270:24060-24066.
-
(1995)
J Biol Chem
, vol.270
, pp. 24060-24066
-
-
Dyhr-Mikkelsen, H.1
Kjems, J.2
-
14
-
-
0030611640
-
U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction
-
Fleckner J, Zhang M, Valcárcel J, Green MR. 1997. U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction. Genes & Dev 11:1864-1872.
-
(1997)
Genes & Dev
, vol.11
, pp. 1864-1872
-
-
Fleckner, J.1
Zhang, M.2
Valcárcel, J.3
Green, M.R.4
-
15
-
-
0024452160
-
Alterations in the polypyrimidine sequence affect the in vitro splicing reactions catalyzed by HeLa cell-free preparations
-
Freyer GA, O'Brien JP, Hurwitz J. 1989. Alterations in the polypyrimidine sequence affect the in vitro splicing reactions catalyzed by HeLa cell-free preparations. J Biol Chem 264:14631-14637.
-
(1989)
J Biol Chem
, vol.264
, pp. 14631-14637
-
-
Freyer, G.A.1
O'Brien, J.P.2
Hurwitz, J.3
-
16
-
-
0029372979
-
The superfamily of arginine/serine-rich splicing factors
-
Fu XD. 1995. The superfamily of arginine/serine-rich splicing factors. RNA 1:663-680.
-
(1995)
RNA
, vol.1
, pp. 663-680
-
-
Fu, X.D.1
-
17
-
-
0024842159
-
Identification and purification of a 62,000-dalton protein that binds specifically to the polypyrimidine tract of introns
-
Garcia-Blanco MA, Jamison SF, Sharp PA. 1989. Identification and purification of a 62,000-dalton protein that binds specifically to the polypyrimidine tract of introns. Genes & Dev 3:1874-1886.
-
(1989)
Genes & Dev
, vol.3
, pp. 1874-1886
-
-
Garcia-Blanco, M.A.1
Jamison, S.F.2
Sharp, P.A.3
-
18
-
-
0030044836
-
Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A
-
Gozani O, Feld R, Reed R. 1996. Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A. Genes & Dev 10:233-243.
-
(1996)
Genes & Dev
, vol.10
, pp. 233-243
-
-
Gozani, O.1
Feld, R.2
Reed, R.3
-
19
-
-
0031878108
-
A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site
-
Gozani O, Potashkin J, Reed R. 1998. A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site. Mol Cell Biol 18:4752-4760.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 4752-4760
-
-
Gozani, O.1
Potashkin, J.2
Reed, R.3
-
20
-
-
0025787954
-
Biochemical mechanisms of constitutive and regulated pre-mRNA splicing
-
Green MR. 1991. Biochemical mechanisms of constitutive and regulated pre-mRNA splicing. Annu Rev Cell Biol 7:559-599.
-
(1991)
Annu Rev Cell Biol
, vol.7
, pp. 559-599
-
-
Green, M.R.1
-
21
-
-
0025279906
-
Distribution and consensus of branch point signals in eukaryotic genes: A computerized statistical analysis
-
Harris NL, Senapathy P. 1990. Distribution and consensus of branch point signals in eukaryotic genes: A computerized statistical analysis. Nucleic Acids Res 18:3015-3019.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 3015-3019
-
-
Harris, N.L.1
Senapathy, P.2
-
22
-
-
0023877583
-
Unusual branch point selection in processing of human growth hormone pre-mRNA
-
Hartmuth K, Barta A. 1988. Unusual branch point selection in processing of human growth hormone pre-mRNA. Mol Cell Biol 8:2011-2020.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 2011-2020
-
-
Hartmuth, K.1
Barta, A.2
-
23
-
-
0023037969
-
Effects of mutations at the lariat branch acceptor site on β-globin pre-mRNA splicing in vitro
-
Hornig H, Aebi M, Weissmann C. 1986. Effects of mutations at the lariat branch acceptor site on β-globin pre-mRNA splicing in vitro. Nature 324:589-591.
-
(1986)
Nature
, vol.324
, pp. 589-591
-
-
Hornig, H.1
Aebi, M.2
Weissmann, C.3
-
24
-
-
0026655649
-
The spliceosome assembly pathway in mammalian extracts
-
Jamison SF, Crow A, Garcia-Blanco MA. 1992. The spliceosome assembly pathway in mammalian extracts. Mol Cell Biol 12:4279-4287.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 4279-4287
-
-
Jamison, S.F.1
Crow, A.2
Garcia-Blanco, M.A.3
-
25
-
-
0037829771
-
Intron splicing: A conserved internal signal in introns of animal pre-mRNAs
-
Keller EB, Noon WA. 1984. Intron splicing: A conserved internal signal in introns of animal pre-mRNAs. Proc Natl Acad Sci USA 81:7417-7420.
-
(1984)
Proc Natl Acad Sci USA
, vol.81
, pp. 7417-7420
-
-
Keller, E.B.1
Noon, W.A.2
-
26
-
-
0026668641
-
Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex
-
Kramer A. 1992. Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex. Mol Cell Biol 12:4545-4552.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 4545-4552
-
-
Kramer, A.1
-
27
-
-
0023390960
-
A mutational analysis of spliceosome assembly: Evidence for splice site collaboration during spliceosome formation
-
Lamond Al, Konarska MM, Sharp PA. 1987. A mutational analysis of spliceosome assembly: Evidence for splice site collaboration during spliceosome formation. Genes & Dev 1:532-543.
-
(1987)
Genes & Dev
, vol.1
, pp. 532-543
-
-
Lamond, Al.1
Konarska, M.M.2
Sharp, P.A.3
-
28
-
-
0025040786
-
Sequence requirements in different steps of the pre-mRNA splicing reaction: Analysis by the RNA modification-exclusion technique
-
Lang KM, Keller W. 1990. Sequence requirements in different steps of the pre-mRNA splicing reaction: Analysis by the RNA modification-exclusion technique. Mol Cell Biol 10:4942-4947.
-
(1990)
Mol Cell Biol
, vol.10
, pp. 4942-4947
-
-
Lang, K.M.1
Keller, W.2
-
29
-
-
0032865541
-
Genomic-scale quantitative analysis of yeast pre-mRNA splicing: Implications for splice-site recognition
-
Lopez PJ, Séraphin B. 1999. Genomic-scale quantitative analysis of yeast pre-mRNA splicing: Implications for splice-site recognition. RNA 5:1135-1137.
-
(1999)
RNA
, vol.5
, pp. 1135-1137
-
-
Lopez, P.J.1
Séraphin, B.2
-
30
-
-
0028556759
-
Dynamic association of proteins with the pre-mRNA branch region
-
MacMillan AM, Query CC, Allerson CR, Chen S, Verdine GL, Sharp PA. 1994. Dynamic association of proteins with the pre-mRNA branch region. Genes & Dev 8:3008-3020.
-
(1994)
Genes & Dev
, vol.8
, pp. 3008-3020
-
-
MacMillan, A.M.1
Query, C.C.2
Allerson, C.R.3
Chen, S.4
Verdine, G.L.5
Sharp, P.A.6
-
31
-
-
0020050314
-
A catalogue of splice junction sequences
-
Mount SM. 1982. A catalogue of splice junction sequences. Nucleic Acids Res 10:459-472.
-
(1982)
Nucleic Acids Res
, vol.10
, pp. 459-472
-
-
Mount, S.M.1
-
32
-
-
0024747748
-
Mammalian U2 snRNP has a sequence-specific RNA-binding activity
-
Nelson KK, Green MR. 1989. Mammalian U2 snRNP has a sequence-specific RNA-binding activity. Genes & Dev 3:1562-1571.
-
(1989)
Genes & Dev
, vol.3
, pp. 1562-1571
-
-
Nelson, K.K.1
Green, M.R.2
-
33
-
-
1842326159
-
The branchpoint residue is recognized during commitment complex formation before being bulged out of the U2 snRNA-pre-mRNA duplex
-
Pascolo E, Séraphin B. 1997. The branchpoint residue is recognized during commitment complex formation before being bulged out of the U2 snRNA-pre-mRNA duplex. Mol Cell Biol 17:3469-3476.
-
(1997)
Mol Cell Biol
, vol.17
, pp. 3469-3476
-
-
Pascolo, E.1
Séraphin, B.2
-
34
-
-
0028205987
-
Branch nucleophile selection in pre-mRNA splicing: Evidence for the bulged duplex model
-
Query CC, Moore MJ, Sharp PA. 1994. Branch nucleophile selection in pre-mRNA splicing: Evidence for the bulged duplex model. Genes & Dev 8:587-597.
-
(1994)
Genes & Dev
, vol.8
, pp. 587-597
-
-
Query, C.C.1
Moore, M.J.2
Sharp, P.A.3
-
35
-
-
0029917043
-
Three recognition events at the branch-site adenine
-
Query CC, Strobel SA, Sharp PA. 1996. Three recognition events at the branch-site adenine. EMBO J 15:1392-1402.
-
(1996)
EMBO J
, vol.15
, pp. 1392-1402
-
-
Query, C.C.1
Strobel, S.A.2
Sharp, P.A.3
-
36
-
-
0024808994
-
The organization of 3′ splice-site sequences in mammalian introns
-
Reed R. 1989. The organization of 3′ splice-site sequences in mammalian introns. Genes & Dev 3:2113-2123.
-
(1989)
Genes & Dev
, vol.3
, pp. 2113-2123
-
-
Reed, R.1
-
37
-
-
0021887989
-
Intron sequences involved in lariat formation during pre-mRNA splicing
-
Reed R, Maniatis T. 1985. Intron sequences involved in lariat formation during pre-mRNA splicing. Cell 41:95-105.
-
(1985)
Cell
, vol.41
, pp. 95-105
-
-
Reed, R.1
Maniatis, T.2
-
38
-
-
0024100723
-
The role of the mammalian branchpoint sequence in pre-mRNA splicing
-
Reed R, Maniatis T. 1988. The role of the mammalian branchpoint sequence in pre-mRNA splicing. Genes & Dev 2:1268-1276.
-
(1988)
Genes & Dev
, vol.2
, pp. 1268-1276
-
-
Reed, R.1
Maniatis, T.2
-
39
-
-
0027233694
-
A mutational analysis of the polypyrimidine tract of introns. Effects of sequence differences in pyrimidine tracts on splicing
-
Roscigno RF, Weiner M, Garcia-Blanco MA. 1993. A mutational analysis of the polypyrimidine tract of introns. Effects of sequence differences in pyrimidine tracts on splicing. J Biol Chem 268: 11222-11229.
-
(1993)
J Biol Chem
, vol.268
, pp. 11222-11229
-
-
Roscigno, R.F.1
Weiner, M.2
Garcia-Blanco, M.A.3
-
40
-
-
0027428138
-
Four yeast spliceosomal proteins (PRP5, PRP9, PRP11, and PRP21) interact to promote U2 snRNP binding to pre-mRNA
-
Ruby SW, Chang TH, Abelson J. 1993. Four yeast spliceosomal proteins (PRP5, PRP9, PRP11, and PRP21) interact to promote U2 snRNP binding to pre-mRNA. Genes & Dev 7:1909-1925.
-
(1993)
Genes & Dev
, vol.7
, pp. 1909-1925
-
-
Ruby, S.W.1
Chang, T.H.2
Abelson, J.3
-
41
-
-
0022380943
-
Role of the 3′ splice site consensus sequence in mammalian pre-mRNA splicing
-
Ruskin B, Green MR. 1985. Role of the 3′ splice site consensus sequence in mammalian pre-mRNA splicing. Nature 317:732-734.
-
(1985)
Nature
, vol.317
, pp. 732-734
-
-
Ruskin, B.1
Green, M.R.2
-
42
-
-
0025008168
-
Sequence logos: A new way to display consensus sequences
-
Schneider TD, Stephens RM. 1990. Sequence logos: A new way to display consensus sequences. Nucleic Acids Res 18:6097-6100.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 6097-6100
-
-
Schneider, T.D.1
Stephens, R.M.2
-
43
-
-
0023651307
-
RNA splice junctions of different classes of eukaryotes: Sequence statistics and functional implications in gene expression
-
Shapiro MB, Senapathy P. 1987. RNA splice junctions of different classes of eukaryotes: Sequence statistics and functional implications in gene expression. Nucleic Acids Res 15:7155-7174.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 7155-7174
-
-
Shapiro, M.B.1
Senapathy, P.2
-
44
-
-
0029055472
-
Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins
-
Singh R, Valcarcel J, Green MR. 1995. Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins. Science 268:1173-1176.
-
(1995)
Science
, vol.268
, pp. 1173-1176
-
-
Singh, R.1
Valcarcel, J.2
Green, M.R.3
-
45
-
-
0027214101
-
Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns
-
Smith CW, Chu TT, Nadal-Ginard B. 1993. Scanning and competition between AGs are involved in 3′ splice site selection in mammalian introns. Mol Cell Biol 13:4939-4952.
-
(1993)
Mol Cell Biol
, vol.13
, pp. 4939-4952
-
-
Smith, C.W.1
Chu, T.T.2
Nadal-Ginard, B.3
-
46
-
-
0024470631
-
Scanning from an independently specified branch point defines the 3′ splice site of mammalian introns
-
Smith CW, Porro EB, Patton JG, Nadal-Ginard B. 1989. Scanning from an independently specified branch point defines the 3′ splice site of mammalian introns. Nature 342:243-247.
-
(1989)
Nature
, vol.342
, pp. 243-247
-
-
Smith, C.W.1
Porro, E.B.2
Patton, J.G.3
Nadal-Ginard, B.4
-
47
-
-
0028209981
-
Direct interactions between pre-mRNA and six U2 small nuclear ribonucleoproteins during spliceosome assembly
-
Staknis D, Reed R. 1994. Direct interactions between pre-mRNA and six U2 small nuclear ribonucleoproteins during spliceosome assembly. Mol Cell Biol 14:2994-3005.
-
(1994)
Mol Cell Biol
, vol.14
, pp. 2994-3005
-
-
Staknis, D.1
Reed, R.2
-
48
-
-
0032489021
-
Mechanical devices of the spliceosome: Motors, clocks, springs, and things
-
Staley JP, Guthrie C. 1998. Mechanical devices of the spliceosome: Motors, clocks, springs, and things. Cell 92:315-326.
-
(1998)
Cell
, vol.92
, pp. 315-326
-
-
Staley, J.P.1
Guthrie, C.2
-
49
-
-
0024743838
-
Mammalian pre-mRNA branch site selection by U2 snRNP involves base pairing
-
Wu J, Manley JL 1989. Mammalian pre-mRNA branch site selection by U2 snRNP involves base pairing. Genes & Dev 3:1553-1561.
-
(1989)
Genes & Dev
, vol.3
, pp. 1553-1561
-
-
Wu, J.1
Manley, J.L.2
-
50
-
-
0030919832
-
The herpes simplex virus type 1 2.0-kilobase latency-associated transcript is a stable intron which branches at a guanosine
-
Zabolotny JM, Krummenacher C, Fraser NW. 1997. The herpes simplex virus type 1 2.0-kilobase latency-associated transcript is a stable intron which branches at a guanosine. J Virol 71:4199-4208.
-
(1997)
J Virol
, vol.71
, pp. 4199-4208
-
-
Zabolotny, J.M.1
Krummenacher, C.2
Fraser, N.W.3
-
51
-
-
0026716104
-
SR proteins: A conserved family of pre-mRNA splicing factors
-
Zahler AM, Lane WS, Stolk JA, Roth MB. 1992. SR proteins: A conserved family of pre-mRNA splicing factors. Genes & Dev 6:837-847.
-
(1992)
Genes & Dev
, vol.6
, pp. 837-847
-
-
Zahler, A.M.1
Lane, W.S.2
Stolk, J.A.3
Roth, M.B.4
-
52
-
-
0026569967
-
Cloning and domain structure of the mammalian splicing factor U2AF
-
Zamore PD, Patton JG, Green MR. 1992. Cloning and domain structure of the mammalian splicing factor U2AF. Nature 355:609-614.
-
(1992)
Nature
, vol.355
, pp. 609-614
-
-
Zamore, P.D.1
Patton, J.G.2
Green, M.R.3
-
53
-
-
0002862339
-
UACUAAC is the preferred branch site for mammalian mRNA splicing
-
Zhuang Y, Goldstein AM, Weiner AM. 1989. UACUAAC is the preferred branch site for mammalian mRNA splicing. Proc Natl Acad Sci USA 86:2752-2756.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 2752-2756
-
-
Zhuang, Y.1
Goldstein, A.M.2
Weiner, A.M.3
-
54
-
-
0024744567
-
A compensatory base change in human U2 snRNA can suppress a branch site mutation
-
Zhuang Y, Weiner AM. 1989. A compensatory base change in human U2 snRNA can suppress a branch site mutation. Genes & Dev 3:1545-1552.
-
(1989)
Genes & Dev
, vol.3
, pp. 1545-1552
-
-
Zhuang, Y.1
Weiner, A.M.2
-
55
-
-
0025076272
-
The conserved dinucleotide AG of the 3′ splice site may be recognized twice during in vitro splicing of mammalian mRNA precursors
-
Zhuang Y, Weiner AM. 1990. The conserved dinucleotide AG of the 3′ splice site may be recognized twice during in vitro splicing of mammalian mRNA precursors. Gene 90:263-269.
-
(1990)
Gene
, vol.90
, pp. 263-269
-
-
Zhuang, Y.1
Weiner, A.M.2
|