Genetic diversity of clinical and environmental isolates of Vibrio cholerae determined by amplified fragment length polymorphism fingerprinting

Applied and Environmental Microbiology

Volumn 66, Issue 1, 2000, Pages 148-153

  Jiang, Sunny C ^a,d   Matte, Maria ^a,b   Matte, Glavur ^a,b   Huq, Anwar ^a,c   Colwell, Rita R ^a,c  

^a UNIVERSITY OF MARYLAND BIOTECHNOLOGY INSTITUTE   (United States)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

^c UNIVERSITY OF MARYLAND   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM; DNA FINGERPRINTING; EPIDEMIOLOGY; EVOLUTIONARY BIOLOGY; GENETIC VARIATION;

ARTICLE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CHOLERA; DNA FINGERPRINTING; DNA POLYMORPHISM; EPIDEMIC; GENE TRANSFER; GENETIC VARIABILITY; MOLECULAR EVOLUTION; NONHUMAN; VIBRIO CHOLERAE;

VIBRIO CHOLERAE;

EID: 0033989387     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.66.1.148-153.2000     Document Type: Article

References (23)

1. Albert, M. J., N. A. Bhuiyan, K. A. Talukder, A. S. G. Faruque, S. Nahar, S. M. Faruque, M. Ansaruzzaman, and M. Rahman. 1997. Phenotypic and genotypic changes in Vibrio cholerae O139 Bengal. J. Clin. Microbiol. 35: 2588-2592.
2. Arias, C., L. Verdonck, J. Swings, R. Aznar, and E. Garay. 1997. A polyphasic approach to study the intraspecific diversity amongst Vibrio vulnificus isolates. Syst. Appl. Microbiol. 20:622-633.
3. Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1995. Short protocols in molecular biology, 3rd ed. John Wiley & Sons, Inc., New York, N.Y.
4. Centers for Disease Control. 1991. Cholera - Peru, 1991. Morbid. Mortal. Weekly Rep. 40:108-110.
5. Choudhury, S. R., R. K. Bhadra, and J. Das. 1994. Genome size and restriction fragment length polymorphism analysis of Vibrio cholerae strains belonging to different serovars and biotypes. FEMS Microbiol. Lett. 115:329-334.
6. Dalsgaard, A., A. Forslund, N. V. Tam, D. X. Vinh, and P. D. Cam. 1999. Cholera in Vietnam: changes in genotypes and emergence of class I integrons containing aminoglycoside resistance gene cassettes in Vibrio cholerae O1 strains isolated from 1979 to 1996. J. Clin. Microbiol. 37:734-741.
7. Dijkshoorn, L., H. Aucken, P. Gerner-Smidt, P. Janssen, M. E. Kaufmann, J. Garaizar, J. Ursing, and T. L. Pitt. 1996. Comparison of outbreak and nonoutbreak Acinetobacter baumannii strains by genotypic and phenotypic methods. J. Clin. Microbiol. 34:1519-1525.
8. Faruque, S. M., M. J. Albert, and J. J. Mekalanos. 1998. Epidemiology, genetics, and ecology of toxigenic Vibrio cholerae. Microbiol. Mol. Biol. Rev. 62:1301-1314.
9. Faruque, S. M., and M. J. Albert. 1992. Genetic relation between Vibrio cholerae O1 strains in Ecuador and Bangladesh. Lancet 339:740-741.
10. Huys, G., R. Coopman, P. Janssen, and K. Kersters. 1996. High-resolution genotypic analysis of the genus Aeromonas by AFLP fingerprinting. Int. J. Syst. Bacteriol. 46:572-580.
11. Janssen, P., R. Coopman, G. Huys, J. Swings, M. Bleeker, P. Vos, M. Zabeau, and K. Kersters. 1996. Evaluation of the DNA fingerprinting method AFLP as a new tool in bacterial taxonomy. Microbiology 142:1881-1893.
12. Janssen, P., and L. Dijkshoorn. 1996. High resolution DNA fingerprinting of Acinetobacter outbreak strains. FEMS Microbiol. Lett. 142:191-194.
13. Kaper, J. B., H. B. Bradford, N. C. Roberts, and S. Falkow. 1982. Molecular epidemiology of Vibrio cholerae in the U.S. Gulf Coast. J. Clin. Microbiol. 16:129-134.
14. Karaolis, D. K. R., R. Lan, and P. R. Reeves. 1995. The sixth and seventh cholera pandemics are due to independent clones separately derived from environmental, nontoxigenic, non-O1 Vibrio cholerae. J. Bacteriol. 177:3191-3198.
15. Keim, P., A. Kalif, J. Schupp, K. Hill, S. E. Travis, K. Richmond, D. M. Adair, M. Hugh-Jones, C. R. Kuske, and P. Jackson. 1997. Molecular evolution and diversity in Bacillus anthracis as detected by amplified fragment length polymorphism markers. J. Bacteriol. 179:818-824.
16. Popovic, T., P. I. Fields, O. Olsvik, J. G. Wells, G. M. Evins, D. N. Cameron, J. J. Farmer III, C. A. Bopp, K. Wachsmuth, R. B. Sack, M. J. Albert, G. B. Nair, T. Shimada, and J. C. Feeley. 1995. Molecular subtyping of toxigenic Vibrio cholerae O139 causing epidemic cholera in India and Bangladesh, 1992-1993. J. Infect. Dis. 171:122-127.
17. Rivera, I. G., M. A. R. Chowdhury, A. Huq, D. Jacobs, M. T. Martins, and R. R. Colwell. 1995. Enterobacterial repetitive intergenic consensus sequences and the PCR to generate fingerprints of genomic DNAs from Vibrio cholerae O1, O139, and non-O1 strains. Appl. Environ. Microbiol. 61:2898-2904.
18. Tauxe, R., L. Seminario, R. Tapia, and M. Libel. 1994. The Latin American epidemic, p. 321-344. In I. K. Wachsmuth, P. A. Blake, and Ø. Olsvik (ed.), Vibrio cholerae and cholera: molecular to global perspectives. American Society for Microbiology, Washington, D.C.
19. Trucksis, M., J. Michalski, Y. K. Deng, and J. B. Kaper. 1998. The Vibrio cholerae genome contains two unique circular chromosomes. Proc. Natl. Acad. Sci. USA 95:14464-14469.
20. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. Van De Lee, M. Hornes, A. Frijters, J. Pot, J. Peleman, M. Kuiper, and M. Zabeau. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23:4407-4414.
21. Wachsmuth, I. K., C. A. Bopp, P. I. Fields, and C. Carrillo. 1991. Difference between toxigenic Vibrio cholerae O1 from South America and US Gulf Coast. Lancet 337:1097-1098.
22. Wachsmuth, I. K., G. M. Evins, P. I. Fields, O. Olsvik, T. Popovic, D. A. Bopp, J. G. Wells, C. Carrillo, and P. Blake. 1993. The molecular epidemiology of cholera in Latin America. J. Infect. Dis. 167:621-626.
23. Waldor, M. K., and J. J. Mekalanos. 1996. Lysogenic conversion by a filamentous phage encoding cholera toxin. Science 272:1910-1914.