메뉴 건너뛰기




Volumn 6, Issue 1, 2000, Pages 79-87

Expanded CUG repeat RNAs form hairpins that activate the double-stranded RNA-dependent protein kinase PKR

Author keywords

CUG repeat; Double stranded RNA; dsRNA binding motif; Muscle; Myotonic dystrophy; PKR

Indexed keywords

DOUBLE STRANDED RNA; INTERFERON; PROTEIN KINASE;

EID: 0033983537     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838200991544     Document Type: Article
Times cited : (212)

References (45)
  • 1
    • 0029782652 scopus 로고    scopus 로고
    • Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR
    • Bevilacqua PC, Cech TR. 1996. Minor-groove recognition of double-stranded RNA by the double-stranded RNA-binding domain from the RNA-activated protein kinase PKR. Biochemistry 35:9983-9994.
    • (1996) Biochemistry , vol.35 , pp. 9983-9994
    • Bevilacqua, P.C.1    Cech, T.R.2
  • 2
    • 0030598342 scopus 로고    scopus 로고
    • Relationship between Escherichia coli growth and deletions of CTG•CAG triplet repeats in plasmids
    • Bowater RP, Rosche WA, Jaworski A, Sinden RR, Wells RD. 1996. Relationship between Escherichia coli growth and deletions of CTG•CAG triplet repeats in plasmids. J Mol Biol 264:82-96.
    • (1996) J Mol Biol , vol.264 , pp. 82-96
    • Bowater, R.P.1    Rosche, W.A.2    Jaworski, A.3    Sinden, R.R.4    Wells, R.D.5
  • 4
    • 0028233381 scopus 로고
    • RNA template-directed RNA synthesis by T7 RNA polymerase
    • Cazenave C, Uhlenbeck OC. 1994. RNA template-directed RNA synthesis by T7 RNA polymerase. Proc Natl Acad Sci USA 91:6972-6976.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 6972-6976
    • Cazenave, C.1    Uhlenbeck, O.C.2
  • 6
    • 0002352428 scopus 로고    scopus 로고
    • Protein kinases that phosphorylate elF2 and elF2B, and their role in eukaryotic cell translational control
    • Hershey JWB, Mathews MB, Sonenberg N, eds. Cold Spring Harbor, New York: Cold Spring Harbor Press
    • Clemens MJ. 1996. Protein kinases that phosphorylate elF2 and elF2B, and their role in eukaryotic cell translational control. In: Hershey JWB, Mathews MB, Sonenberg N, eds. Translational control. Cold Spring Harbor, New York: Cold Spring Harbor Press, pp 139-172.
    • (1996) Translational Control , pp. 139-172
    • Clemens, M.J.1
  • 7
    • 0030841672 scopus 로고    scopus 로고
    • Expansion of a CUG trinucleotide repeat in the 3′ untranslated region of myotonic dystrophy protein kinase transcripts results in nuclear retention of transcripts
    • Davis BM, McCurrach ME, Taneja KL, Singer RH, Housman DE. 1997. Expansion of a CUG trinucleotide repeat in the 3′ untranslated region of myotonic dystrophy protein kinase transcripts results in nuclear retention of transcripts. Proc Natl Acad Sci USA 94:7388-7393.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 7388-7393
    • Davis, B.M.1    McCurrach, M.E.2    Taneja, K.L.3    Singer, R.H.4    Housman, D.E.5
  • 11
    • 0016669608 scopus 로고
    • The characteristics of inhibition of protein synthesis by double-stranded ribonucleic acid in reticulocyte lysates
    • Hunter T, Hunt T, Jackson RJ, Robertson HD. 1975. The characteristics of inhibition of protein synthesis by double-stranded ribonucleic acid in reticulocyte lysates. J Biol Chem 250:409-417.
    • (1975) J Biol Chem , vol.250 , pp. 409-417
    • Hunter, T.1    Hunt, T.2    Jackson, R.J.3    Robertson, H.D.4
  • 12
    • 0030585155 scopus 로고    scopus 로고
    • When two strands are better than one: The mediators and modulators of the cellular responses to double-stranded RNA
    • Jacobs BL, Langland JO. 1996. When two strands are better than one: The mediators and modulators of the cellular responses to double-stranded RNA. Virology 219:339-349.
    • (1996) Virology , vol.219 , pp. 339-349
    • Jacobs, B.L.1    Langland, J.O.2
  • 15
    • 0027421163 scopus 로고
    • Organization of the double-stranded RNA-activated protein kinase DAI and virus-associated VA RNAI in adenovirus-2-infected HeLa cells
    • Jimenez-Garcia LF, Green SR, Mathews MB, Spector DL 1993. Organization of the double-stranded RNA-activated protein kinase DAI and virus-associated VA RNAI in adenovirus-2-infected HeLa cells. J Cell Sci 106:11-22.
    • (1993) J Cell Sci , vol.106 , pp. 11-22
    • Jimenez-Garcia, L.F.1    Green, S.R.2    Mathews, M.B.3    Spector, D.L.4
  • 17
    • 0024549254 scopus 로고
    • Purification and activation of the double-stranded RNA-dependent elF-2 kinase DAI
    • Kostura M, Mathews MB. 1989. Purification and activation of the double-stranded RNA-dependent elF-2 kinase DAI. Mol Cell Biol 9:1576-1586.
    • (1989) Mol Cell Biol , vol.9 , pp. 1576-1586
    • Kostura, M.1    Mathews, M.B.2
  • 19
    • 0030972389 scopus 로고    scopus 로고
    • Nuclear antisense RNA induces extensive adenosine modifications and nuclear retention of target transcripts
    • Kumar M, Carmichael GG. 1997. Nuclear antisense RNA induces extensive adenosine modifications and nuclear retention of target transcripts. Proc Natl Acad Sci USA 94:3542-3547.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 3542-3547
    • Kumar, M.1    Carmichael, G.G.2
  • 20
    • 0029163447 scopus 로고
    • Identification, tissue-specific expression, and subcellular localization of the 80-and 71-kDa forms of myotonic dystrophy kinase protein
    • Maeda M, Taft CS, Bush EW, Holder E, Bailey WM, Neville H, Perryman, MB, Bies RD. 1995. Identification, tissue-specific expression, and subcellular localization of the 80-and 71-kDa forms of myotonic dystrophy kinase protein. J Biol Chem 270:20246-20249.
    • (1995) J Biol Chem , vol.270 , pp. 20246-20249
    • Maeda, M.1    Taft, C.S.2    Bush, E.W.3    Holder, E.4    Bailey, W.M.5    Neville, H.6    Perryman, M.B.7    Bies, R.D.8
  • 21
    • 0026713151 scopus 로고
    • Interactions between double-stranded RNA regulators and the protein kinase DAI
    • Manche L, Green SR, Schmedt C, Mathews MB. 1992. Interactions between double-stranded RNA regulators and the protein kinase DAI. Mol Cell Biol 12:5238-5248.
    • (1992) Mol Cell Biol , vol.12 , pp. 5238-5248
    • Manche, L.1    Green, S.R.2    Schmedt, C.3    Mathews, M.B.4
  • 22
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
    • Mathews DH, Sabina J, Zuker M, Turner DH. 1999. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol 288:911-940.
    • (1999) J Mol Biol , vol.288 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 23
    • 0001016282 scopus 로고    scopus 로고
    • Interactions between viruses and the cellular machinery for protein synthesis
    • Hershey JWB, Mathews MB, Sonenberg N, eds. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
    • Mathews MB. 1996. Interactions between viruses and the cellular machinery for protein synthesis. In: Hershey JWB, Mathews MB, Sonenberg N, eds. Translational control. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press, pp 505-508.
    • (1996) Translational Control , pp. 505-508
    • Mathews, M.B.1
  • 24
    • 0025931571 scopus 로고
    • Adenovirus virus-associated RNA and translation control
    • Mathews MB, Shenk T. 1991. Adenovirus virus-associated RNA and translation control. J Virol 65:5657-5662.
    • (1991) J Virol , vol.65 , pp. 5657-5662
    • Mathews, M.B.1    Shenk, T.2
  • 25
    • 0025129434 scopus 로고
    • Removal of double-stranded contaminants from RNA transcripts: Synthesis of adenovirus VA RNAI from a T7 vector
    • Mellits KH, Pe'ery T, Manche L, Robertson HD, Mathews MB. 1990. Removal of double-stranded contaminants from RNA transcripts: Synthesis of adenovirus VA RNAI from a T7 vector. Nucleic Acids Res 18:5401-5406.
    • (1990) Nucleic Acids Res , vol.18 , pp. 5401-5406
    • Mellits, K.H.1    Pe'ery, T.2    Manche, L.3    Robertson, H.D.4    Mathews, M.B.5
  • 26
    • 0018801485 scopus 로고
    • Structural requirements of double-stranded RNA for the activation of 2′,5′-oligo(A) polymerase and protein kinase of interferon-treated HeLa cells
    • Minks MA, West DK, Benvin S, Baglioni C. 1979. Structural requirements of double-stranded RNA for the activation of 2′,5′-oligo(A) polymerase and protein kinase of interferon-treated HeLa cells. J Biol Chem 254:10180-10183.
    • (1979) J Biol Chem , vol.254 , pp. 10180-10183
    • Minks, M.A.1    West, D.K.2    Benvin, S.3    Baglioni, C.4
  • 27
    • 1842406027 scopus 로고    scopus 로고
    • CUG repeats present in myotonin kinase RNA form metastable slippery hairpins
    • Napierala M, Krzyzosiak WJ. 1997. CUG repeats present in myotonin kinase RNA form metastable slippery hairpins. J Biol Chem 272:31079-31085.
    • (1997) J Biol Chem , vol.272 , pp. 31079-31085
    • Napierala, M.1    Krzyzosiak, W.J.2
  • 28
    • 0029746150 scopus 로고
    • In vitro synthesis and cloning of long CAG repeats
    • Ordway JM, Detloff PJ. 1961. In vitro synthesis and cloning of long CAG repeats. Biotechniques 21:609-610.
    • (1961) Biotechniques , vol.21 , pp. 609-610
    • Ordway, J.M.1    Detloff, P.J.2
  • 29
    • 0032570797 scopus 로고    scopus 로고
    • Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease
    • Petruska J, Hartenstine MJ, Goodman MF. 1998. Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease. J Biol Chem 273:5204-5210.
    • (1998) J Biol Chem , vol.273 , pp. 5204-5210
    • Petruska, J.1    Hartenstine, M.J.2    Goodman, M.F.3
  • 30
    • 0032076126 scopus 로고    scopus 로고
    • Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy
    • Philips AV, Timchenko LT, Cooper TA. 1998. Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy. Science 280:737-741.
    • (1998) Science , vol.280 , pp. 737-741
    • Philips, A.V.1    Timchenko, L.T.2    Cooper, T.A.3
  • 32
    • 0016861471 scopus 로고
    • Ribonucleic acid processing activity of Escherichia coli ribonuclease III
    • Robertson HD, Dunn JJ. 1975. Ribonucleic acid processing activity of Escherichia coli ribonuclease III. J Biol Chem 250:3050-3056.
    • (1975) J Biol Chem , vol.250 , pp. 3050-3056
    • Robertson, H.D.1    Dunn, J.J.2
  • 33
    • 0030013732 scopus 로고    scopus 로고
    • Paradoxical interactions between human delta hepatitis agent RNA and the cellular protein kinase PKR
    • Robertson HD, Manche L, Mathews MB. 1996. Paradoxical interactions between human delta hepatitis agent RNA and the cellular protein kinase PKR. J Virol 70:5611-5617.
    • (1996) J Virol , vol.70 , pp. 5611-5617
    • Robertson, H.D.1    Manche, L.2    Mathews, M.B.3
  • 34
    • 0030893062 scopus 로고    scopus 로고
    • A ribonuclease specific for inosine-containing RNA: A potential role in antiviral defence?
    • Scadden AD, Smith CW. 1997. A ribonuclease specific for inosine-containing RNA: A potential role in antiviral defence? EMBO J 16:2140-2149.
    • (1997) EMBO J , vol.16 , pp. 2140-2149
    • Scadden, A.D.1    Smith, C.W.2
  • 35
    • 0029078852 scopus 로고
    • Functional characterization of the RNA-binding domain and motif of the double-stranded RNA-dependent protein kinase DAI (PKR)
    • Schmedt C, Green SR, Manche L, Taylor DR, Ma Y, Mathews MB. 1995. Functional characterization of the RNA-binding domain and motif of the double-stranded RNA-dependent protein kinase DAI (PKR). J Mol Biol 249:29-44.
    • (1995) J Mol Biol , vol.249 , pp. 29-44
    • Schmedt, C.1    Green, S.R.2    Manche, L.3    Taylor, D.R.4    Ma, Y.5    Mathews, M.B.6
  • 36
    • 0023812658 scopus 로고
    • Alteration of nuclear (2′-5′)oligoriboadenylate synthetase and nuclease activities preceding replication of human immunodeficiency virus in H9 cells
    • Schroder HC, Wenger R, Rottmann M, Muller WE. 1988. Alteration of nuclear (2′-5′)oligoriboadenylate synthetase and nuclease activities preceding replication of human immunodeficiency virus in H9 cells. Biol Chem Hoppe-Seyler 369:985-995.
    • (1988) Biol Chem Hoppe-seyler , vol.369 , pp. 985-995
    • Schroder, H.C.1    Wenger, R.2    Rottmann, M.3    Muller, W.E.4
  • 37
    • 0027992843 scopus 로고
    • A model for the stabilities of RNA hairpins based on a study of the sequence dependence of stability for hairpins of six nucleotides
    • Serra MJ, Axenson TJ, Turner DH. 1994. A model for the stabilities of RNA hairpins based on a study of the sequence dependence of stability for hairpins of six nucleotides. Biochemistry 33:14289-14296.
    • (1994) Biochemistry , vol.33 , pp. 14289-14296
    • Serra, M.J.1    Axenson, T.J.2    Turner, D.H.3
  • 38
    • 0028947317 scopus 로고
    • Foci of trinucleotide repeat transcripts in nuclei of myotonic dystrophy cells and tissues
    • Taneja KL, McCurrach M, Schalling M, Housman D, Singer RH. 1995. Foci of trinucleotide repeat transcripts in nuclei of myotonic dystrophy cells and tissues. J Cell Biol 128:995-1002.
    • (1995) J Cell Biol , vol.128 , pp. 995-1002
    • Taneja, K.L.1    McCurrach, M.2    Schalling, M.3    Housman, D.4    Singer, R.H.5
  • 39
    • 0027957470 scopus 로고
    • Myotonic dystrophy patients have larger CTG expansions in skeletal muscle than in leukocytes
    • Thornton CA, Johnson K, Moxley RT. 1994. Myotonic dystrophy patients have larger CTG expansions in skeletal muscle than in leukocytes. Ann Neurol 35:104-107.
    • (1994) Ann Neurol , vol.35 , pp. 104-107
    • Thornton, C.A.1    Johnson, K.2    Moxley, R.T.3
  • 41
    • 0028924624 scopus 로고
    • Self-coded 3′-extension of run-off transcripts produces aberrant products during in vitro transcription with T7 RNA polymerase
    • Triana-Alonso FJ, Dabrowski M, Wadzack J, Nierhaus KH. 1995. Self-coded 3′-extension of run-off transcripts produces aberrant products during in vitro transcription with T7 RNA polymerase. J Biol Chem 270:6298-6307.
    • (1995) J Biol Chem , vol.270 , pp. 6298-6307
    • Triana-Alonso, F.J.1    Dabrowski, M.2    Wadzack, J.3    Nierhaus, K.H.4
  • 43
    • 0028000994 scopus 로고
    • Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding
    • Walter AE, Turner DH, Kim J, Lyttle MH, Muller P, Mathews DH, Zuker. 1994. Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding. Proc Natl Acad Sci USA 91:9218-9222.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 9218-9222
    • Walter, A.E.1    Turner, D.H.2    Kim, J.3    Lyttle, M.H.4    Muller, P.5    Mathews, D.H.6    Zuker7
  • 44
    • 0032994572 scopus 로고    scopus 로고
    • Inventory of high-abundance mRNAs in skeletal muscle of normal men
    • Welle S, Bhatt K, Thornton CA. 1999. Inventory of high-abundance mRNAs in skeletal muscle of normal men. Genome Res 9:506-513.
    • (1999) Genome Res , vol.9 , pp. 506-513
    • Welle, S.1    Bhatt, K.2    Thornton, C.A.3
  • 45
    • 0022290939 scopus 로고
    • Double stranded RNA and the nuclear matrix: Implications for the 2-5A system
    • Wreschner DH, Nathanel T, Herzberg M. 1985. Double stranded RNA and the nuclear matrix: Implications for the 2-5A system. Prog Clin Biol Res 202:47-66.
    • (1985) Prog Clin Biol Res , vol.202 , pp. 47-66
    • Wreschner, D.H.1    Nathanel, T.2    Herzberg, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.