A saturated genetic linkage map of rubber tree (Hevea spp.) based on RFLP, AFLP, microsatellite, and isozyme markers

Theoretical and Applied Genetics

Volumn 100, Issue 1, 2000, Pages 127-138

  Lespinasse, D ^a   Rodier Goud, M ^a   Grivet, L ^a   Leconte, A ^a   Legnate, H ^b   Seguin, M ^a  

^a CIRAD   (France)

^b Institut des Forêts   (Côte d’Ivoire)

Author keywords

Consensus map; Double pseudo testcross; F1 cross; Genetic map; Hevea

Indexed keywords

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; CLONE; DIPLOIDY; GENE LOCUS; GENE MAPPING; GENETIC MARKER; GENETIC RECOMBINATION; HYBRID; INTERSPECIFIC HYBRIDIZATION; ISOENZYME; LINKAGE GROUP; MEIOSIS; MICROSATELLITE DNA; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SEGREGATION DISTORTION;

EMBRYOPHYTA; HEVEA; HEVEA BENTHAMIANA; HEVEA BRASILIENSIS;

EID: 0033980782     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050018     Document Type: Article

References (52)

1. Attanyaka DP, Keckwick RG, Franklin FC (1991) Molecular cloning and nucleotide sequencing of the rubber elongation factor gene from Hevea brasiliensis. Plant Mol Biol 16:1079-1081
2. Bennett MD, Leitch IJ (1997) Nuclear DNA amounts in angiosperms - 583 new estimates. Ann Bot 80:169-196
3. Besse P, Lebrun P, Seguin M, Lanaud C (1993a) DNA fingerprints in Hevea brasiliensis (rubber tree) using human minisatellite probes. Heredity 70:237-244
4. Besse P, Seguin M, Lebrun P, Lanaud C (1993b) Ribosomal DNA variations in wild and cultivated rubber tree (Hevea brasiliensis). Genome 36:1049-1057
5. Besse P, Seguin M, Lebrun P, Chevallier MH, Nicolas D, Lanaud C (1994) Genetic diversity among wild and cultivated populations of Hevea brasiliensis assessed by nuclear RFLP analysis. Theor Appl Genet 88:199-207
6. Bonierbale M, Plaisted R, Tanksley S (1988) RFLP maps based on a common set of clones reveal modes of chromosomal evolution in potato and tomato. Genetics 120:1095-1103
7. Bouharmont J (1960) Recherches taxonomiques et caryologiques chez quelques espèces du genre Hevea. In: Série Scientifique, INEAC, Vol 85, 64 pages
8. Broekaert WF, Lee H, Kush A (1990) Wound-induced accumulation of mRNA containing a hevein sequence in laticifers of rubber tree (Hevea brasiliensis). Proc Natl Acad Sci 87:7633-7637
9. 1 progeny of conifers. Theor Appl Genet 83:194-200
10. Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald PC, Harrington SE, Second G, McCouch SR, Tanksley SD (1994) Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138:1251-1274
11. Chevallier MH (1988) Genetic variability of Hevea brasiliensis germplasm using isozyme markers. J Nat Rubber Res 3:42-53
12. Chye M, Kush A, Tan C, Chua N (1991) Characterization of cDNA and genomic clones encoding 3-hydroxy-3-methylglutaryl-coenzyme A reductase from Hevea brasiliensis. Plant Mol Biol 16:567-577
13. de Vicente MC, Tanksley SD (1991) Genome-wide reduction in recombination of backcross progeny derived from male versus female gametes in an interspecific cross of tomato. Theor Appl Genet 83:173-178
14. Fregene M, Angel F, Gomez R, Rodriguez F, Chavarriaga P, Roca W, Tohme J, Bonierbale M (1997) A molecular map of cassava (Manihot esculenta Crantz). Theor Appl Genet 95:431-441
15. Gerlach WL, Bedbrook JR (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res 7:1869-1885
16. Goyvaert E, Dennis M, Light D, Chua N-H (1991) Cloning and sequencing of the cDNA encoding the Rubber Elongation Factor of Hevea brasiliensis. Plant Physiol 97:317-321
17. Grattapaglia D, Sederoff R (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-test-cross mapping strategy and RAPD markers. Genetics 137: 1121-1137
18. 2 population. Genetics 148: 479-494
19. Helentjaris T, Weber D, Wright S (1988) Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphism. Genetics 118:353-363
20. Hulbert SH, Ilott TW, Legg EJ, Lincoln SE, Lander ES, Michelmore RW (1988) Genetic analysis of the fungus, Bremia lactucae, using restriction fragment length polymorphisms. Genetics 120:947-958
21. Kanazin V, Marek LF, Shoemaker RC (1996) Resistance gene analogs are conserved and clustered in soybean. Proc Natl Acad Sci USA 93:11746-11750
22. Keim P, Schupp JM, Travis SE, Clayton K, Zhu T, Shi L, Ferreira A, Webb DM (1997) A high-density soybean genetic map based on AFLP markers. Crop Sci 37:537-543
23. Lanaud C, Risterucci AM, N'goran JAK, Clément D, Flament MH, Laurent V, Falque M (1995) A genetic linkage map of Theobroma cacao L. Theor Appl Genet 91:987-993
24. Lander ES, Green P (1987) Construction of multilocus genetic linkage maps in humans. Proc Natl Acad Sci USA 84:2363-2367
25. Lebrun P, Chevallier MH (1990) Strach and polyacrylamide gel electrophoresis of Hevea brasiliensis: a laboratory manual. IRCA/CIRAD Montpellier, France
26. Leconte A, Lebrun P, Nicolas D, Seguin M (1994) Electrophoresis: application to Hevea clone identification. Plantations Rech Dev 1:28-36
27. Legnate H, Clément-Demange A (1991) Pollinisation artificielle et amélioration génétique de l'hévéa en Côte d'Ivoire. Caoutch Plastiques 704:99-104
28. Leister D, Ballvora A, Salamini F, Gebhardt C (1996) A PCR-based approach for isolating pathogen resistance genes from potato with potential for wide application in plants. Genetics 14:421-429
29. Leitch AR, Lim KY, Leitch IJ, O'Neill M, Chye M, Low F (1998) Molecular cytogenetic studies in rubber, Hevea brasiliensis Muell. Arg. (Euphorbiaceae). Genome 41:464-467
30. Lespinasse D, Seguin M, Legnate H, Troispoux V, Pinard F, Clément-Demange A (1997) Genome mapping in connection with resistance to South American Leaf Blight (Hevea brasiliensis) (Abstract). In: Bigwood B, Gale M, Miksche JP, McCouch S (eds) Scherago International. New York, USA. Plant Anim Genome V. San Diego, Calif., p 124
31. Lincoln SE, Lander ES (1992) Systematic detection of errors in genetic linkage data. Genomics 14:604-610
32. Maliepaard C, Jansen J, Van Ooijen JW (1997) Linkage analysis in a full-sib family of an outbreeding plant specie: overview and consequences for applications. Gen Res 70:237-250
33. Maliepaard C, Alston FH, van Arkel G, Brown LM, Chevreau E, Dunemann F, Evans KM, Gardiner S, Guilford P, van Heusden AW, Janse J, Laurens F, Lynn JR, Manganaris AG, den Nijs APM, Periam N, Rikkerink E, Roche P, Ryder C, Sansavini S, Schmidt H, Tartarini S, Verhaegh JJ, Vrielink-van Ginkel M, King GJ (1998) Aligning male and female linkage maps of apple (Malus pumila Mill.) using multi-allelic markers. Theor Appl Genet 97:60-73
34. Martin GB, Brommonschenkel SH, Chungonse J, Frary A, Ganal MW, Spivey R, Wu T, Earle ED, Tanksley SD (1993) Map-based cloning of a protein kinase gene conferring disease resistance in tomato. Science 262:1432-1436
35. Miao Z, Gaynor J (1993) Molecular cloning, characterization and expression of Mn-superoxyde dismutase from the rubber tree (Hevea brasiliensis). Plant Mol Biol 23:267-277
36. Morgan DR, Soltis DE, Robertson KR (1994) Systematic and evolutionary implications of rbcL sequence variation in Rosaceae. Am J Bot 81:890-903
37. Ong SH (1975) Chromosome morphology at the pachytene stage in Hevea brasiliensis - a preliminary report. In: IRRBB, Vol 2. Proc Int Rubber Conf., Kuala Lumpur, Malaysia, pp 3-12
38. Plomion C, O'Malley DM, Durel CE (1995) Genomic analysis in maritime pine (Pinus pinaster). Comparison of two RAPD maps using selfed and open-pollinated seeds of the same individual. Theor Appl Genet 90:1028-1034
39. Pujade-Renaud V, Perrot-Rechenmann C, Chrestin H, Lacrotte R, Guern J (1997) Characterization of a full-length cDNA clone encoding glutamine synthetase from rubber tree latex. Plant Physiol Biochem 35:85-93
40. Ritter E, Salamini F (1996) The calculation of recombination frequencies in crosses of allogamous plant species with applications to linkage mapping. Genet Res 67:55-65
41. Ritter E, Gebhardt C, Salamini F (1990) Estimation of recombination frequencies and construction of RFLP linkage maps in plants from crosses between heterozygous parents. Genetics 25:645-654
42. Schultes RE (1990) A brief taxonomic view of the genus Hevea. In: MRRDB (ed) Monograph, Vol 14, 57 pages, Kuala Lumpur, Malaysia
43. Seguin M, Besse P, Lebrun P, Chevallier M-H (1995) Hevea germ-plasm characterization using isozymes and RFLP markers. In: Baradat P, Adams WT, Müller-Starck G (eds) Population genetics and genetic conservation of forest trees. SPB Academic Publ, Amsterdam, the Netherlands, pp 129-134
44. Seguin M, Besse P, Lespinasse D, Lebrun P, Rodier-Goud M, Nicolas D (1996) Hevea molecular genetics. Plantations Rech Dev 3:77-88
45. Seguin M, Rodier-Goud M, Lespinasse D (1997) Mapping SSR markers in rubber tree (Hevea brasiliensis) facilitated and enhanced by heteroduplex formation and template mixing. (Abstract). In: Bigwood B, Gale M, Miksche JP, McCouch S (eds) Scherago International. New York, USA. Plant Anim Genome V. San Diego, Calif., p 66
46. Stam P (1993) Construction of integrated genetic linkage maps by means by a new computer package: JOINMAP. Plant J 3:739-744
47. Stam P, van Ooijen JW (1995) JOINMAP™ version 2.0: software for the calculation of genetic linkage maps. CPRO-DLO, Wageningen
48. Staskawicz BJ, Ausuubel FM, Baker BJ, Ellis JG, Jones JDG (1995) Molecular genetics of plant disease resistance. Science 268:661-667
49. Tulsieram LK, Glaubitz JC, Kiss G, Carlson JE (1992) Single tree genetic linkage mapping in conifers using haploid DNA from megagametophytes. Biotechnology 10:686-689
50. Vallad G, Rivkin MI, Vallejos E, McClean P (1998) Cloning of Pto-like sequences in common bean. (Abstract). In: Bigwood B, Gale M, Miksche JP, McCouch S (eds) Scherago International. New York, USA. Plant Anim Genome VI. San Diego, Calif., p 137
51. Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407-4414
52. Yu YG, Buss GR, Maroof AS (1996) Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site. Proc Natl Acad Sci USA 93:11751-11756