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Volumn 42, Issue 1, 2000, Pages 79-92

Molecular evolution of the chalcone synthase multigene family in the morning glory genome

Author keywords

Anthocyanin; Chalcone synthase; Gene duplication; Ipomoea; Rate of nucleotide substitution; Stilbene synthase

Indexed keywords

BIOSYNTHESIS; CHALCONE SYNTHASE; GENE DUPLICATION; GENE EXPRESSION; GENE MUTATION; IPOMOEA PURPUREA; MOLECULAR EVOLUTION; MULTIGENE FAMILY; PLANT GENOME;

EID: 0033976087     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006375904820     Document Type: Article
Times cited : (180)

References (46)
  • 1
    • 0031964372 scopus 로고    scopus 로고
    • Evolution of substrate specificities in the P-type ATPase superfamily
    • Axelsen KB, Palmgren MG: Evolution of substrate specificities in the P-type ATPase superfamily. J Mol Evol 46: 84-101 (1998).
    • (1998) J Mol Evol , vol.46 , pp. 84-101
    • Axelsen, K.B.1    Palmgren, M.G.2
  • 2
    • 0000715205 scopus 로고
    • Chalcone synthases from spinach (Spinacia oleracea L.)
    • Beerhues L, Robeneck H, Wiermann R: Chalcone synthases from spinach (Spinacia oleracea L.). Planta 173: 544-553 (1988).
    • (1988) Planta , vol.173 , pp. 544-553
    • Beerhues, L.1    Robeneck, H.2    Wiermann, R.3
  • 3
    • 0032127574 scopus 로고    scopus 로고
    • A chalcone synthase with an unusual substrate preference is expressed in barley leaves in response to UV light and pathogen attack
    • Christensen AB, Gregersen PL, Schröder J, Collinge DB: A chalcone synthase with an unusual substrate preference is expressed in barley leaves in response to UV light and pathogen attack. Plant Mol Biol 37: 849-857 (1998).
    • (1998) Plant Mol Biol , vol.37 , pp. 849-857
    • Christensen, A.B.1    Gregersen, P.L.2    Schröder, J.3    Collinge, D.B.4
  • 5
    • 0030908487 scopus 로고    scopus 로고
    • Evidence for channeling of intermediates in the oxidative pentose phosphate pathway by soybean and pea nodule extracts, yeast extracts, and purified yeast enzymes
    • Debnam PM, Shearer G, Blackwood L, Kohl DH: Evidence for channeling of intermediates in the oxidative pentose phosphate pathway by soybean and pea nodule extracts, yeast extracts, and purified yeast enzymes. Eur J Biochem 246: 283-290 (1997).
    • (1997) Eur J Biochem , vol.246 , pp. 283-290
    • Debnam, P.M.1    Shearer, G.2    Blackwood, L.3    Kohl, D.H.4
  • 7
    • 0000785063 scopus 로고
    • Flower color variation in the morning glory, Ipomoea purpurea
    • Ennos RA, Clegg MT: Flower color variation in the morning glory, Ipomoea purpurea. J Hered 74: 247-250 (1983).
    • (1983) J Hered , vol.74 , pp. 247-250
    • Ennos, R.A.1    Clegg, M.T.2
  • 8
    • 0002209907 scopus 로고
    • Genetics of flower color polymorphism in the common morning glory (Ipomoea purpurea)
    • Epperson BK, Clegg MT: Genetics of flower color polymorphism in the common morning glory (Ipomoea purpurea). J Hered 79: 64-69 (1988).
    • (1988) J Hered , vol.79 , pp. 64-69
    • Epperson, B.K.1    Clegg, M.T.2
  • 9
    • 0027058267 scopus 로고
    • Unstable white flower color genes and their derivatives in the morning glory
    • Epperson BK, Clegg MT: Unstable white flower color genes and their derivatives in the morning glory. J Hered 83: 405-409 (1992).
    • (1992) J Hered , vol.83 , pp. 405-409
    • Epperson, B.K.1    Clegg, M.T.2
  • 10
    • 0031158921 scopus 로고    scopus 로고
    • Identification of new chalcone synthase genes for flower pigmentation in the Japanese and common morning glories
    • Fukada-Tanaka S, Hoshino A, Hisatomi Y, Habu Y, Hasebe M, Iida S: Identification of new chalcone synthase genes for flower pigmentation in the Japanese and common morning glories. Plant Cell Physiol 38: 754-758 (1997).
    • (1997) Plant Cell Physiol , vol.38 , pp. 754-758
    • Fukada-Tanaka, S.1    Hoshino, A.2    Hisatomi, Y.3    Habu, Y.4    Hasebe, M.5    Iida, S.6
  • 11
    • 0029812835 scopus 로고    scopus 로고
    • Substitution rate comparisons between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL
    • Gaut BS, Morton BR, McCaig BC, Clegg MT: Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proc Natl Acad Sci USA 93: 10274-10279 (1996).
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 10274-10279
    • Gaut, B.S.1    Morton, B.R.2    McCaig, B.C.3    Clegg, M.T.4
  • 12
    • 0001542328 scopus 로고
    • Phytochemicals: Differentiation and function
    • Gottlieb O: Phytochemicals: differentiation and function. Phytochemistry 29: 1715-1724 (1990).
    • (1990) Phytochemistry , vol.29 , pp. 1715-1724
    • Gottlieb, O.1
  • 13
    • 0031578261 scopus 로고    scopus 로고
    • Amplified restriction fragment length polymorphism-based mRNA fingerprinting using a single restriction enzyme that recognizes a 4-bp sequence
    • Habu, Y, Fukada-Tanaka, S, Hisatomi Y, Iida, S: Amplified restriction fragment length polymorphism-based mRNA fingerprinting using a single restriction enzyme that recognizes a 4-bp sequence. Biochem Biophys Res Comm 234: 516-521 (1997).
    • (1997) Biochem Biophys Res Comm , vol.234 , pp. 516-521
    • Habu, Y.1    Fukada-Tanaka, S.2    Hisatomi, Y.3    Iida, S.4
  • 14
    • 0032213176 scopus 로고    scopus 로고
    • Molecular characterization of the mutable flaked allele for flower variegation in the common morning glory
    • Habu, Y, Hisatomi Y, Iida S: Molecular characterization of the mutable flaked allele for flower variegation in the common morning glory. Plant J 16: 371-376 (1998).
    • (1998) Plant J , vol.16 , pp. 371-376
    • Habu, Y.1    Hisatomi, Y.2    Iida, S.3
  • 15
    • 0029810640 scopus 로고    scopus 로고
    • Duplication and functional divergence in the chalcone synthase gene family of Asteraceae: Evolution with substrate change and catalytic simplification
    • Helariutta Y, Kotilainen M, Elomaa P, Kalkkinen N, Bremer K, Teeri TH, Albert VA: Duplication and functional divergence in the chalcone synthase gene family of Asteraceae: evolution with substrate change and catalytic simplification. Proc Natl Acad Sci USA 93: 9033-9038 (1996).
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 9033-9038
    • Helariutta, Y.1    Kotilainen, M.2    Elomaa, P.3    Kalkkinen, N.4    Bremer, K.5    Teeri, T.H.6    Albert, V.A.7
  • 16
    • 0023473011 scopus 로고
    • Biochemical, immunological and immunocytochemical evidence for the association of chalcone synthase with endoplasmic reticulum membranes
    • Hrazdina G, Zobel AM, Hoch HC: Biochemical, immunological and immunocytochemical evidence for the association of chalcone synthase with endoplasmic reticulum membranes. Proc Natl Acad Sci USA 84: 8966-8970 (1987).
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 8966-8970
    • Hrazdina, G.1    Zobel, A.M.2    Hoch, H.C.3
  • 18
    • 0031009988 scopus 로고    scopus 로고
    • Nucleotide polymorphism in the chalcone synthase: A locus and evolution of the chalcone synthase multigene family of common morning glory Ipomoea purpurea
    • Huttley GA, Durbin ML, Glover DE, Clegg MT: Nucleotide polymorphism in the chalcone synthase: A locus and evolution of the chalcone synthase multigene family of common morning glory Ipomoea purpurea. Mol Ecol 6: 549-558 (1997).
    • (1997) Mol Ecol , vol.6 , pp. 549-558
    • Huttley, G.A.1    Durbin, M.L.2    Glover, D.E.3    Clegg, M.T.4
  • 20
    • 0000617012 scopus 로고
    • Analysis of flower colour in Pharbitis nil
    • Imai Y: Analysis of flower colour in Pharbitis nil. J Genet 24: 203-224 (1931).
    • (1931) J Genet , vol.24 , pp. 203-224
    • Imai, Y.1
  • 21
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Mums HN (ed), Academic Press, New York
    • Jukes TH, Cantor CR: Evolution of protein molecules. In: Mums HN (ed), Mammalian Protein Metabolism, pp. 21-132. Academic Press, New York (1969).
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 22
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M: A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120 (1980).
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 23
    • 4243067792 scopus 로고
    • The chalcone synthase multigene family of Petunia hybrida (V30): Sequence homology, chromosomal localization and evolutionary aspects
    • Koes RE, Spelt CE, Mol JNM, Gerats AG: The chalcone synthase multigene family of Petunia hybrida (V30): sequence homology, chromosomal localization and evolutionary aspects. Plant Mol Biol 10: 159-169 (1987).
    • (1987) Plant Mol Biol , vol.10 , pp. 159-169
    • Koes, R.E.1    Spelt, C.E.2    Jnm, M.3    Gerats, A.G.4
  • 24
    • 0000436272 scopus 로고
    • The chalcone synthase multi-gene family of Petunia hybrida (V30): Differential, light-regulated expression during flower development and UV light induction
    • Koes RE, Spelt CE, Mol JNM: The chalcone synthase multi-gene family of Petunia hybrida (V30): differential, light-regulated expression during flower development and UV light induction. Plant Mol Biol 12: 213-225 (1989).
    • (1989) Plant Mol Biol , vol.12 , pp. 213-225
    • Koes, R.E.1    Spelt, C.E.2    Jnm, M.3
  • 25
    • 0024440265 scopus 로고
    • Cloning and molecular characterization of the chalcone synthase multi-gene family of Petunia hybrida
    • Koes RE, Spelt CE, van den Elzen PJM, Mol JNM: Cloning and molecular characterization of the chalcone synthase multi-gene family of Petunia hybrida. Gene 81: 245-257 (1989).
    • (1989) Gene , vol.81 , pp. 245-257
    • Koes, R.E.1    Spelt, C.E.2    Van Den Elzen, P.J.M.3    Mol, J.N.M.4
  • 26
    • 0028155769 scopus 로고
    • The flavonoid biosynthetic pathway in plants: Function and evolution
    • Koes RE, Quattrocchio F, Mol JNM: The flavonoid biosynthetic pathway in plants: function and evolution. BioEssays 16: 123-132 (1994).
    • (1994) BioEssays , vol.16 , pp. 123-132
    • Koes, R.E.1    Quattrocchio, F.2    Mol, J.N.M.3
  • 28
    • 0026486403 scopus 로고
    • Relative-rate test for nucleotide substitutions between two lineages
    • Li P, Bousquet J: Relative-rate test for nucleotide substitutions between two lineages. Mol Biol Evol 9: 1185-1189 (1992).
    • (1992) Mol Biol Evol , vol.9 , pp. 1185-1189
    • Li, P.1    Bousquet, J.2
  • 29
    • 0003421005 scopus 로고    scopus 로고
    • Sinauer Associates, Sunderland, MA
    • Li W-H: Molecular Evolution. Sinauer Associates, Sunderland, MA (1997).
    • (1997) Molecular Evolution
    • Li, W.-H.1
  • 31
    • 0027742458 scopus 로고
    • Structure, function, and regulation of the chalcone synthase
    • Martin CR: Structure, function, and regulation of the chalcone synthase. Int Rev Cytol 147: 233-284 (1993).
    • (1993) Int Rev Cytol , vol.147 , pp. 233-284
    • Martin, C.R.1
  • 32
    • 0028024626 scopus 로고
    • A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome
    • Muse SV, Gaut BS: A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome. Mol Biol Evol 11: 715-724 (1994).
    • (1994) Mol Biol Evol , vol.11 , pp. 715-724
    • Muse, S.V.1    Gaut, B.S.2
  • 33
    • 0025605709 scopus 로고
    • Molecular genetic analysis of chalcone synthase in Lycopersicon esculentum and an anthocyanin-deficient mutant
    • O'Neill SD, Tong Y, Sprolein B, Forkmann G, Yoder J: Molecular genetic analysis of chalcone synthase in Lycopersicon esculentum and an anthocyanin-deficient mutant. Mol Gen Genet 224: 279-288 (1990).
    • (1990) Mol Gen Genet , vol.224 , pp. 279-288
    • O'Neill, S.D.1    Tong, Y.2    Sprolein, B.3    Forkmann, G.4    Yoder, J.5
  • 34
    • 0023505583 scopus 로고
    • Organization and differential activation of a gene family encoding the plant defense enzyme CHS in Phaseolus vulgaris
    • Ryder TB, Hedrick SA, Bell JN, Liang X, Clouse SD, Lamb CJ: Organization and differential activation of a gene family encoding the plant defense enzyme CHS in Phaseolus vulgaris. Mol Gen Genet 210: 219-233 (1987).
    • (1987) Mol Gen Genet , vol.210 , pp. 219-233
    • Ryder, T.B.1    Hedrick, S.A.2    Bell, J.N.3    Liang, X.4    Clouse, S.D.5    Lamb, C.J.6
  • 36
    • 0040241878 scopus 로고    scopus 로고
    • A family of plant-specific polyketide synthases: Facts and predictions
    • Schröder J: A family of plant-specific polyketide synthases: facts and predictions. Trends Plant Sci 2: 373-378 (1997).
    • (1997) Trends Plant Sci , vol.2 , pp. 373-378
    • Schröder, J.1
  • 38
    • 0342728960 scopus 로고
    • Structure of the chalcone synthase gene of Antirrhinum majus
    • Sommer H, Saedler H: Structure of the chalcone synthase gene of Antirrhinum majus. Mol Gen Genet 202: 429-434 (1986).
    • (1986) Mol Gen Genet , vol.202 , pp. 429-434
    • Sommer, H.1    Saedler, H.2
  • 39
    • 0023529039 scopus 로고
    • Organizational aspects of the citric acid cycle
    • Srere PA, Sümegi B, Sherry AD: Organizational aspects of the citric acid cycle. Biochem Soc Symp 54: 173-182 (1987).
    • (1987) Biochem Soc Symp , vol.54 , pp. 173-182
    • Srere, P.A.1    Sümegi, B.2    Sherry, A.D.3
  • 40
    • 0022816351 scopus 로고
    • Metabolite transfer via enzyme-enzyme complexes
    • Srivastava DK, Bernhard SA: Metabolite transfer via enzyme-enzyme complexes. Science 234: 1081-1084 (1986).
    • (1986) Science , vol.234 , pp. 1081-1084
    • Srivastava, D.K.1    Bernhard, S.A.2
  • 41
    • 0001477970 scopus 로고
    • Flavonoid evolution: An enzymic approach
    • Stafford HA: Flavonoid evolution: an enzymic approach. Plant Physiol 96: 680-685 (1991).
    • (1991) Plant Physiol , vol.96 , pp. 680-685
    • Stafford, H.A.1
  • 42
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight-matrix choice
    • Thompson JD, Higgins DG, Gibson TJ: Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight-matrix choice. Nucl Acids Res 22: 4673-4680 (1994).
    • (1994) Nucl Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 43
    • 0031867938 scopus 로고    scopus 로고
    • Control of expression patterns of anthocyanin structural genes by two loci in the common morning glory
    • Tiffin P, Miller R, Rausher M: Control of expression patterns of anthocyanin structural genes by two loci in the common morning glory. Genes Genet Syst 73: 105-110 (1998).
    • (1998) Genes Genet Syst , vol.73 , pp. 105-110
    • Tiffin, P.1    Miller, R.2    Rausher, M.3
  • 44
    • 0028321623 scopus 로고
    • Evidence that stilbene synthases have developed from chalcone synthases several times in the course of evolution
    • Tropf S, Lanz T, Rensing SA, Schröder J, Schröder G: Evidence that stilbene synthases have developed from chalcone synthases several times in the course of evolution. J Mol Evol 38: 610-618 (1994).
    • (1994) J Mol Evol , vol.38 , pp. 610-618
    • Tropf, S.1    Lanz, T.2    Rensing, S.A.3    Schröder, J.4    Schröder, G.5
  • 45
    • 0028913554 scopus 로고
    • Reaction mechanisms of homodimeric plant polyketide synthases (stilbene and chalcone synthase). a single active site for the condensing reaction is sufficient for synthesis of stilbenes, chalcones, and 6′-deoxychalcones
    • Tropf S, Kärcher B, Schröder G, Schröder J: Reaction mechanisms of homodimeric plant polyketide synthases (stilbene and chalcone synthase). A single active site for the condensing reaction is sufficient for synthesis of stilbenes, chalcones, and 6′-deoxychalcones. J Biol Chem 270: 7922-7928 (1995).
    • (1995) J Biol Chem , vol.270 , pp. 7922-7928
    • Tropf, S.1    Kärcher, B.2    Schröder, G.3    Schröder, J.4
  • 46
    • 0028893838 scopus 로고
    • How often do duplicated genes evolve new functions?
    • Walsh JB: How often do duplicated genes evolve new functions? Genetics 139: 421-428 (1995).
    • (1995) Genetics , vol.139 , pp. 421-428
    • Walsh, J.B.1


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