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Volumn 6, Issue 1, 2000, Pages 121-135

Mitochondrial minicircles in the free-living bodonid Bodo saltans contain two gRNA gene cassettes and are not found in large networks

Author keywords

Guide RNA; Kinetoplastids; Minicircles; Mitochondrion; RNA editing

Indexed keywords

COMPLEMENTARY DNA; RNA;

EID: 0033969814     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838200992021     Document Type: Article
Times cited : (15)

References (54)
  • 1
    • 0030922796 scopus 로고    scopus 로고
    • The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria
    • Alfonzo JD, Thiemann O, Simpson L. 1997. The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria. Nucleic Acids Res 25:3751-3759.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3751-3759
    • Alfonzo, J.D.1    Thiemann, O.2    Simpson, L.3
  • 2
    • 0030012876 scopus 로고    scopus 로고
    • Mechanism and evolution of RNA editing in kinetoplastida
    • Arts GJ, Benne R. 1996. Mechanism and evolution of RNA editing in kinetoplastida. Biochim Biophys Acta 1307:39-54.
    • (1996) Biochim Biophys Acta , vol.1307 , pp. 39-54
    • Arts, G.J.1    Benne, R.2
  • 3
    • 0029401501 scopus 로고
    • Organization and complexity of minicircle-encoded guide RNAs from Trypanosoma cruzi
    • Avila HA, Simpson L. 1995. Organization and complexity of minicircle-encoded guide RNAs from Trypanosoma cruzi. RNA 1:939-947.
    • (1995) RNA , vol.1 , pp. 939-947
    • Avila, H.A.1    Simpson, L.2
  • 4
    • 0022552305 scopus 로고
    • Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA
    • Benne R, van den Burg J, Brakenhoff JPJ, Sloof P, van Boom JH, Tromp MC. 1986. Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA. Cell 46:819-826.
    • (1986) Cell , vol.46 , pp. 819-826
    • Benne, R.1    Van Den Burg, J.2    Brakenhoff, J.P.J.3    Sloof, P.4    Van Boom, J.H.5    Tromp, M.C.6
  • 5
    • 0023654048 scopus 로고
    • Structural characterization of site-specific discontinuities associated with replication origins of minicircle DNA from Crithidia fasciculata
    • Birkenmeyer L, Sugisaki H, Ray DS. 1987. Structural characterization of site-specific discontinuities associated with replication origins of minicircle DNA from Crithidia fasciculata. J Biol Chem 262:2384-2392.
    • (1987) J Biol Chem , vol.262 , pp. 2384-2392
    • Birkenmeyer, L.1    Sugisaki, H.2    Ray, D.S.3
  • 8
    • 0025793869 scopus 로고
    • Why kinetoplast DNA networks?
    • Borst P. 1991. Why kinetoplast DNA networks? Trends Genet 7:139-141.
    • (1991) Trends Genet , vol.7 , pp. 139-141
    • Borst, P.1
  • 9
    • 0018717348 scopus 로고
    • The maxicircle of Trypanosoma brucei kinetoplast DNA
    • Borst P, Fase-Fowler F. 1979. The maxicircle of Trypanosoma brucei kinetoplast DNA. Biochim Biophys Acta 565:1-12.
    • (1979) Biochim Biophys Acta , vol.565 , pp. 1-12
    • Borst, P.1    Fase-Fowler, F.2
  • 10
    • 0002688702 scopus 로고
    • Fine structure of Bodo saltans and Bodo caudatus (Zoomastigophora; Protozoa) and their affinities with Trypanosomatidae
    • Brooker BE. 1971. Fine structure of Bodo saltans and Bodo caudatus (Zoomastigophora; Protozoa) and their affinities with Trypanosomatidae Bull Brit Museum [Nat Hist] 22:89-102.
    • (1971) Bull Brit Museum [Nat Hist] , vol.22 , pp. 89-102
    • Brooker, B.E.1
  • 11
    • 0001446403 scopus 로고
    • Comparaison et évolution des structures cellulaires chez plusieurs espèces de Bodonidés et Cryptobiidés appartenant aux genres Bodo, Cryptobia et Trypanoplasma (Kinetoplastida, Mastigophora)
    • Brugerolle G, Lom J, Nohyncová E, Joyon L. 1979. Comparaison et évolution des structures cellulaires chez plusieurs espèces de Bodonidés et Cryptobiidés appartenant aux genres Bodo, Cryptobia et Trypanoplasma (Kinetoplastida, Mastigophora). Protistologica 15:197-221.
    • (1979) Protistologica , vol.15 , pp. 197-221
    • Brugerolle, G.1    Lom, J.2    Nohyncová, E.3    Joyon, L.4
  • 13
    • 0022965871 scopus 로고
    • Separation of large DNA molecules by contour-clamped homogeneous electric fields
    • Chu G, Vollrath D, Davis RW. 1986. Separation of large DNA molecules by contour-clamped homogeneous electric fields. Science 234:1582-1585.
    • (1986) Science , vol.234 , pp. 1582-1585
    • Chu, G.1    Vollrath, D.2    Davis, R.W.3
  • 15
    • 0021744548 scopus 로고
    • Sequences of six genes and several open reading frames in the kinetoplast maxicircle DNA of Leishmania tarentolae
    • De la Cruz VF, Neckelmann N, Simpson L. 1984. Sequences of six genes and several open reading frames in the kinetoplast maxicircle DNA of Leishmania tarentolae. J Biol Chem 259:15136-15147.
    • (1984) J Biol Chem , vol.259 , pp. 15136-15147
    • De La Cruz, V.F.1    Neckelmann, N.2    Simpson, L.3
  • 16
    • 0018786803 scopus 로고
    • Free minicircles of kinetoplast DNA in Crithidia fasciculata
    • Englund PT. 1979. Free minicircles of kinetoplast DNA in Crithidia fasciculata. J Biol Chem 254:4895-4900.
    • (1979) J Biol Chem , vol.254 , pp. 4895-4900
    • Englund, P.T.1
  • 17
    • 0029062411 scopus 로고
    • The maize mitochondrial genome: Dynamic, yet functional
    • Fauron C, Casper M, Gao Y, Moore B. 1995. The maize mitochondrial genome: Dynamic, yet functional. Trends Genet 11:228-235.
    • (1995) Trends Genet , vol.11 , pp. 228-235
    • Fauron, C.1    Casper, M.2    Gao, Y.3    Moore, B.4
  • 18
    • 0027138234 scopus 로고
    • Evolution of nuclear ribosomal RNA in kinetoplastid protozoa: Perspectives on the age and origins of parasitism
    • Fernandes AP, Nelson K, Beverley SM. 1993. Evolution of nuclear ribosomal RNA in kinetoplastid protozoa: Perspectives on the age and origins of parasitism. Proc Natl Acad Sci USA 90:11608-11612.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 11608-11612
    • Fernandes, A.P.1    Nelson, K.2    Beverley, S.M.3
  • 19
    • 0343514802 scopus 로고
    • Processing of transfer RNA precursors
    • Higgins SJ, Hames BD, eds. Oxford: Oxford University Press
    • Greer GL. 1994. Processing of transfer RNA precursors. In: Higgins SJ, Hames BD, eds. RNA processing, a practical approach. Vol. II. Oxford: Oxford University Press, pp 173-209.
    • (1994) RNA Processing, a Practical Approach , vol.2 , pp. 173-209
    • Greer, G.L.1
  • 20
    • 0002534282 scopus 로고    scopus 로고
    • Mitochondrial mRNA editing in kinetoplastid protozoa
    • Grosjean H, Benne R, eds. Washington DC: ASM Press
    • Hajduk SL, Sabatini RS. 1998. Mitochondrial mRNA editing in kinetoplastid protozoa. In: Grosjean H, Benne R, eds. Modification and editing of RNA. Washington DC: ASM Press, pp 377-393.
    • (1998) Modification and Editing of RNA , pp. 377-393
    • Hajduk, S.L.1    Sabatini, R.S.2
  • 21
    • 0023034004 scopus 로고
    • Kinetoplast DNA of Bodo caudatus: A noncatenated structure
    • Hajduk SL, Siqueira AM, Vickerman K. 1986. Kinetoplast DNA of Bodo caudatus: A noncatenated structure. Mol Cell Biol 6:4372-4378.
    • (1986) Mol Cell Biol , vol.6 , pp. 4372-4378
    • Hajduk, S.L.1    Siqueira, A.M.2    Vickerman, K.3
  • 22
    • 0021760708 scopus 로고
    • The sequence of the gene for cytochrome c oxidase subunit I, a frameshift containing gene for cytochrome c oxidase subunit II and seven unassigned reading frames in Trypanosoma brucei mitochondrial maxicircle DNA
    • Hensgens LAM, Brakenhoff J, de Vries BF, Sloof P, Tromp MC, van Boom JH, Benne R. 1984. The sequence of the gene for cytochrome c oxidase subunit I, a frameshift containing gene for cytochrome c oxidase subunit II and seven unassigned reading frames in Trypanosoma brucei mitochondrial maxicircle DNA. Nucleic Acids Res 12:7327-7344.
    • (1984) Nucleic Acids Res , vol.12 , pp. 7327-7344
    • Hensgens, L.A.M.1    Brakenhoff, J.2    De Vries, B.F.3    Sloof, P.4    Tromp, M.C.5    Van Boom, J.H.6    Benne, R.7
  • 24
    • 0028838464 scopus 로고
    • Marine fish and ray trypanosomes have large kinetoplast minicircles DNA
    • Jirku M, Kolesnikov AA, Benada O, Lukes J. 1995. Marine fish and ray trypanosomes have large kinetoplast minicircles DNA. Mol Biochem Parasitol 73:279-283.
    • (1995) Mol Biochem Parasitol , vol.73 , pp. 279-283
    • Jirku, M.1    Kolesnikov, A.A.2    Benada, O.3    Lukes, J.4
  • 25
    • 0021716090 scopus 로고
    • Gapped minicircles. A novel replication intermediate of kinetoplast DNA
    • Kitchin PA, Klein VA, Fein BI, Englund P. 1984. Gapped minicircles. A novel replication intermediate of kinetoplast DNA. J Biol Chem 259:15532-15539.
    • (1984) J Biol Chem , vol.259 , pp. 15532-15539
    • Kitchin, P.A.1    Klein, V.A.2    Fein, B.I.3    Englund, P.4
  • 26
    • 0016612765 scopus 로고
    • Properties of the intact multicircular complex from Crithidia fasciculata
    • Kleisen CM, Borst P, Weijers PJ. 1975. Properties of the intact multicircular complex from Crithidia fasciculata. Biochim Biophys Acta 390:155-167.
    • (1975) Biochim Biophys Acta , vol.390 , pp. 155-167
    • Kleisen, C.M.1    Borst, P.2    Weijers, P.J.3
  • 27
    • 0027962661 scopus 로고
    • Novel pattern of editing regions in mitochondrial transcripts of the cryptobiid Trypanoplasma borreli
    • Lukes J, Arts GJ, Van den Burg J, de Haan A, Opperdoes F, Sloof P, Benne R. 1994. Novel pattern of editing regions in mitochondrial transcripts of the cryptobiid Trypanoplasma borreli. EMBO J 13:5086-5098.
    • (1994) EMBO J , vol.13 , pp. 5086-5098
    • Lukes, J.1    Arts, G.J.2    Van Den Burg, J.3    De Haan, A.4    Opperdoes, F.5    Sloof, P.6    Benne, R.7
  • 28
    • 0032472956 scopus 로고    scopus 로고
    • Pankinetoplast DNA structure in a primitive bodonid flagellate, Cryptobia helicis
    • Lukes J, Jirku M, Avliyakulov N, Benada O. 1998. Pankinetoplast DNA structure in a primitive bodonid flagellate, Cryptobia helicis. EMBO J 17:838-846.
    • (1998) EMBO J , vol.17 , pp. 838-846
    • Lukes, J.1    Jirku, M.2    Avliyakulov, N.3    Benada, O.4
  • 30
    • 0028209204 scopus 로고
    • Evolution of RNA editing in kinetoplastid protozoa
    • Maslov DA, Avila HA, Lake JA, Simpson L. 1994. Evolution of RNA editing in kinetoplastid protozoa. Nature 368:345-348.
    • (1994) Nature , vol.368 , pp. 345-348
    • Maslov, D.A.1    Avila, H.A.2    Lake, J.A.3    Simpson, L.4
  • 31
    • 0032101933 scopus 로고    scopus 로고
    • Demonstration of mRNA editing and localization of guide RNA genes in kinetoplast-mitochondria of the plant trypanosomatid Phytomonas serpens
    • Maslov DA, Hollar L, Haghighat P, Nawathean P. 1998. Demonstration of mRNA editing and localization of guide RNA genes in kinetoplast-mitochondria of the plant trypanosomatid Phytomonas serpens. Mol Biochem Parasitol 93:225-236.
    • (1998) Mol Biochem Parasitol , vol.93 , pp. 225-236
    • Maslov, D.A.1    Hollar, L.2    Haghighat, P.3    Nawathean, P.4
  • 32
    • 0028033987 scopus 로고
    • RNA editing and genomic organization in the cryptobiid kinetoplastid protozoan, Trypanoplasma borreli
    • Maslov DA, Simpson L. 1994. RNA editing and genomic organization in the cryptobiid kinetoplastid protozoan, Trypanoplasma borreli. Mol Cell Biol 14: 8174-8182.
    • (1994) Mol Cell Biol , vol.14 , pp. 8174-8182
    • Maslov, D.A.1    Simpson, L.2
  • 33
    • 0033103557 scopus 로고    scopus 로고
    • Phylogenetic affinities of Diplonema within the euglenozoa as inferred from the SSU rRNA gene and partial coi sequences
    • Maslov DA, Yasuhira Y, Simpson L. 1999. Phylogenetic affinities of Diplonema within the Euglenozoa as inferred from the SSU rRNA gene and partial COI sequences. Protist 150:33-42.
    • (1999) Protist , vol.150 , pp. 33-42
    • Maslov, D.A.1    Yasuhira, Y.2    Simpson, L.3
  • 36
    • 0024598586 scopus 로고
    • Conserved sequence blocks in kinetoplast DNA minicircles from diverse species of trypanosomes
    • Ray D. 1989. Conserved sequence blocks in kinetoplast DNA minicircles from diverse species of trypanosomes. Mol Cell Biol 9:1365-1367.
    • (1989) Mol Cell Biol , vol.9 , pp. 1365-1367
    • Ray, D.1
  • 37
    • 0023056284 scopus 로고
    • kDNA minicircles of the major sequence class of Crithidia fasciculata contain a single region of bent helix widely separated from the two origins of replication
    • Ray DS, Hines JC, Sugisaki H, Sheline C. 1986. kDNA minicircles of the major sequence class of Crithidia fasciculata contain a single region of bent helix widely separated from the two origins of replication. Nucleic Acids Res 14:7953-7965.
    • (1986) Nucleic Acids Res , vol.14 , pp. 7953-7965
    • Ray, D.S.1    Hines, J.C.2    Sugisaki, H.3    Sheline, C.4
  • 38
    • 0027992047 scopus 로고
    • Multiple guide RNAs for identical editing of Trypanosoma brucei apocytochrome b mRNA have an unusual minicircle location and are developmentally regulated
    • Riley GR, Corell RA, Stuart K. 1994. Multiple guide RNAs for identical editing of Trypanosoma brucei apocytochrome b mRNA have an unusual minicircle location and are developmentally regulated. J Biol Chem 269:6101-6108.
    • (1994) J Biol Chem , vol.269 , pp. 6101-6108
    • Riley, G.R.1    Corell, R.A.2    Stuart, K.3
  • 40
    • 0028844115 scopus 로고
    • The structure and replication of kinetoplast DNA
    • Shapiro TA, Englund PT. 1995. The structure and replication of kinetoplast DNA. Annu Rev Microbiol 49:117-143.
    • (1995) Annu Rev Microbiol , vol.49 , pp. 117-143
    • Shapiro, T.A.1    Englund, P.T.2
  • 41
    • 3242850875 scopus 로고
    • Isolation of maxicircle component of kinetoplast DNA from hemoflagellate protozoa
    • Simpson L. 1979. Isolation of maxicircle component of kinetoplast DNA from hemoflagellate protozoa. Proc Natl Acad Sci USA 76:1585-1588.
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 1585-1588
    • Simpson, L.1
  • 42
    • 0023464113 scopus 로고
    • The mitochondrial genome of kinetoplastid protozoa: Genomic organization, transcription, replication and evolution
    • Simpson L. 1987. The mitochondrial genome of kinetoplastid protozoa: Genomic organization, transcription, replication and evolution. Annu Rev Microbiol 41:363-382.
    • (1987) Annu Rev Microbiol , vol.41 , pp. 363-382
    • Simpson, L.1
  • 43
    • 0030960395 scopus 로고    scopus 로고
    • The genomic organization of guide RNA genes in kinetoplastid protozoa: Several conundrums and their solutions
    • Simpson L. 1997. The genomic organization of guide RNA genes in kinetoplastid protozoa: Several conundrums and their solutions. Mol Biochem Parasitol 86:133-141.
    • (1997) Mol Biochem Parasitol , vol.86 , pp. 133-141
    • Simpson, L.1
  • 45
    • 0025946815 scopus 로고
    • Leishmania tarentolae minicircles of different sequence classes encode single guide RNAs located in the variable region approximately 150 bp from the conserved region
    • Sturm NR, Simpson L. 1991. Leishmania tarentolae minicircles of different sequence classes encode single guide RNAs located in the variable region approximately 150 bp from the conserved region. Nucleic Acids Res 22:6277-6281.
    • (1991) Nucleic Acids Res , vol.22 , pp. 6277-6281
    • Sturm, N.R.1    Simpson, L.2
  • 46
    • 0027997868 scopus 로고
    • Disruption of RNA editing in Leishmania tarentolae by the loss of minicircle-encoded guide RNA genes
    • Thiemann OH, Maslov DA, Simpson L. 1994. Disruption of RNA editing in Leishmania tarentolae by the loss of minicircle-encoded guide RNA genes. EMBO J 13:5689-5700.
    • (1994) EMBO J , vol.13 , pp. 5689-5700
    • Thiemann, O.H.1    Maslov, D.A.2    Simpson, L.3
  • 49
  • 50
    • 0017725411 scopus 로고
    • DNA throughout the single mitochondrion of a kinetoplastid flagellate: Observations on the ultrastructure of Cryptobia vaginalis
    • Vickerman K. 1977. DNA throughout the single mitochondrion of a kinetoplastid flagellate: Observations on the ultrastructure of Cryptobia vaginalis. J Profozool 24:221-233.
    • (1977) J Profozool , vol.24 , pp. 221-233
    • Vickerman, K.1
  • 51
    • 0028939695 scopus 로고
    • Molecular analysis of glycer-aldehyde-3-phosphate dehydrogenase in Trypanoplasma borreli: An evolutionary scenario of subcellular compartmentation in Kinetoplastida
    • Wiemer EAC, Hannaert V, Van den IJsel PRLA, Van Roy J, Opperdoes FR, Michels PAM. 1995. Molecular analysis of glycer-aldehyde-3-phosphate dehydrogenase in Trypanoplasma borreli: An evolutionary scenario of subcellular compartmentation in Kinetoplastida. J Mol Evol 40:443-454.
    • (1995) J Mol Evol , vol.40 , pp. 443-454
    • Wiemer, E.A.C.1    Hannaert, V.2    Van Den Ijsel, P.R.L.A.3    Van Roy, J.4    Opperdoes, F.R.5    Michels, P.A.M.6
  • 52
    • 0029349061 scopus 로고
    • Minicircle-encoded guide RNAs from Crithidia fasciculata
    • Yasuhira S, Simpson L. 1995. Minicircle-encoded guide RNAs from Crithidia fasciculata. RNA 1:634-643.
    • (1995) RNA , vol.1 , pp. 634-643
    • Yasuhira, S.1    Simpson, L.2
  • 53
    • 0029860807 scopus 로고    scopus 로고
    • Guide RNAs and guide RNA genes in the cryptobiid kinetoplastid protozoan, Trypanoplasma borreli
    • Yasuhira S, Simpson L. 1996. Guide RNAs and guide RNA genes in the cryptobiid kinetoplastid protozoan, Trypanoplasma borreli. RNA 2:1153-1160.
    • (1996) RNA , vol.2 , pp. 1153-1160
    • Yasuhira, S.1    Simpson, L.2
  • 54
    • 0032769569 scopus 로고    scopus 로고
    • Trypanosoma avium: Large minicircles in the kinetoplast DNA
    • Yurchenko V, Hobza R, Benada O, Lukes J. 1999. Trypanosoma avium: Large minicircles in the kinetoplast DNA. Exp Parasitol 92:215-218.
    • (1999) Exp Parasitol , vol.92 , pp. 215-218
    • Yurchenko, V.1    Hobza, R.2    Benada, O.3    Lukes, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.