-
1
-
-
0030885697
-
Cascade regulation of the two CRP/FNR-related transcriptional regulators (ANR and DNR) and the denitrification enzymes in Pseudomonas aeruginosa
-
Arai, H., Kodama, T. & Igarashi, Y. (1997). Cascade regulation of the two CRP/FNR-related transcriptional regulators (ANR and DNR) and the denitrification enzymes in Pseudomonas aeruginosa. Mol Microbiol 25, 1141-1148.
-
(1997)
Mol Microbiol
, vol.25
, pp. 1141-1148
-
-
Arai, H.1
Kodama, T.2
Igarashi, Y.3
-
2
-
-
0032952078
-
Effect of nitrogen oxides on expression of the air and nor or genes for denitrification in Pseudomonas aeruginosa
-
Arai, H., Kodama, T. & Igarashi, Y. (1999). Effect of nitrogen oxides on expression of the air and nor or genes for denitrification in Pseudomonas aeruginosa. FEMS Microbiol Lett 170, 19-24.
-
(1999)
FEMS Microbiol Lett
, vol.170
, pp. 19-24
-
-
Arai, H.1
Kodama, T.2
Igarashi, Y.3
-
3
-
-
0029622346
-
Nitrification and denitrification by Thiosphaera pantotroha in aerobic clemostat cultures
-
Arts, P. A. M., Robertson, L. A. & Kuenen, J. G. (1995). Nitrification and denitrification by Thiosphaera pantotroha in aerobic clemostat cultures. FEMS Microbiol Ecol 18, 305-315.
-
(1995)
FEMS Microbiol Ecol
, vol.18
, pp. 305-315
-
-
Arts, P.A.M.1
Robertson, L.A.2
Kuenen, J.G.3
-
4
-
-
0031566333
-
1, structure: Unusual haem environments in a nitrite reductase and analysis of factors contributing to beta-propeller folds
-
1, structure: unusual haem environments in a nitrite reductase and analysis of factors contributing to beta-propeller folds. J Mol Biol 269, 440-455.
-
(1997)
J Mol Biol
, vol.269
, pp. 440-455
-
-
Baker, S.C.1
Saunders, N.F.W.2
Willis, A.C.3
Ferguson, S.J.4
Hajdu, J.5
Fülöp, V.6
-
5
-
-
0031793773
-
Molecular biology of the genus Paracoccus
-
Baker, S. C., Ferguson, S. J., Ludwig, B., Page, M. L. D., Richter, O. H. M. & van Spanning, R. J. M. (1998). Molecular biology of the genus Paracoccus. Microbiol Mol Biol Rev 62, 1046-1078.
-
(1998)
Microbiol Mol Biol Rev
, vol.62
, pp. 1046-1078
-
-
Baker, S.C.1
Ferguson, S.J.2
Ludwig, B.3
Page, M.L.D.4
Richter, O.H.M.5
Van Spanning, R.J.M.6
-
6
-
-
0030984912
-
Characterisation of the nitric oxide reductase-encoding region in Rhodobacter sphaeroides 2.4.3
-
Bartnikas, T. B., Tosques, I. E., Laratta, W. P., Shi, J. & Shapleigh, J. P. (1997). Characterisation of the nitric oxide reductase-encoding region in Rhodobacter sphaeroides 2.4.3. J Bacteriol 179, 3534-3540.
-
(1997)
J Bacteriol
, vol.179
, pp. 3534-3540
-
-
Bartnikas, T.B.1
Tosques, I.E.2
Laratta, W.P.3
Shi, J.4
Shapleigh, J.P.5
-
7
-
-
0028580539
-
Isolation, sequencing and mutational analysis of a gene cluster involved in nitrite reduction in Paracoccus denitrificans
-
de Boer, A. P. N., Reijnders, W. N. M., Kuenen, J. G., Stouthamer, A. H. & van Spanning, R. J. M. (1994). Isolation, sequencing and mutational analysis of a gene cluster involved in nitrite reduction in Paracoccus denitrificans. Antonie Leewenboek 66, 111-127.
-
(1994)
Antonie Leewenboek
, vol.66
, pp. 111-127
-
-
De Boer, A.P.N.1
Reijnders, W.N.M.2
Kuenen, J.G.3
Stouthamer, A.H.4
Van Spanning, R.J.M.5
-
8
-
-
0030438017
-
Mutational analysis of the nor gene cluster which encodes nitric-oxide reductase from Paracoccus denitrificans
-
de Boer, A. P. N., van der Oost, J., Reijnders, W. N. M., Westerhoff, H. V., Stouthamer, A. H. & van Spanning, R. J. M. (1996). Mutational analysis of the nor gene cluster which encodes nitric-oxide reductase from Paracoccus denitrificans. Eur J Biochem 242, 592-600.
-
(1996)
Eur J Biochem
, vol.242
, pp. 592-600
-
-
De Boer, A.P.N.1
Van Der Oost, J.2
Reijnders, W.N.M.3
Westerhoff, H.V.4
Stouthamer, A.H.5
Van Spanning, R.J.M.6
-
9
-
-
0027364449
-
Anaerobic control of denitrification in Pseudomonas stutzen escapes mutagenesis of an fnr-like gene
-
Cuypers, H. & Zumft, W. G. (1993). Anaerobic control of denitrification in Pseudomonas stutzen escapes mutagenesis of an fnr-like gene. J Bacteriol 175, 7236-7246.
-
(1993)
J Bacteriol
, vol.175
, pp. 7236-7246
-
-
Cuypers, H.1
Zumft, W.G.2
-
11
-
-
0028606311
-
Denitrification and its control
-
Ferguson, S. J. (1994). Denitrification and its control. Antonie Leeuwenhoek 66, 89-110.
-
(1994)
Antonie Leeuwenhoek
, vol.66
, pp. 89-110
-
-
Ferguson, S.J.1
-
12
-
-
0027248268
-
Rapid amplification of complementary DNA ends for generation of full-length complementary cDNAs: Thermal RACE
-
Frohman, M. A. (1993). Rapid amplification of complementary DNA ends for generation of full-length complementary cDNAs: thermal RACE. Methods Enzymol 218, 340-356.
-
(1993)
Methods Enzymol
, vol.218
, pp. 340-356
-
-
Frohman, M.A.1
-
14
-
-
0030458408
-
Functional Escherichia coli 23S rRNAs continuing processed and unprocessed intervening sequences from Salmonella typhimurium
-
Gregory, S., O'Connor, M. & Dahlberg, A. (1996). Functional Escherichia coli 23S rRNAs continuing processed and unprocessed intervening sequences from Salmonella typhimurium. Nucleic Acids Res 24, 4918-4923.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4918-4923
-
-
Gregory, S.1
O'Connor, M.2
Dahlberg, A.3
-
15
-
-
0027989421
-
Aerobic-anaerobic gene regulation in Escherichia coli: Control by the ArcAB and Fnr regulons
-
Gunsalus, R. P. & Park, S. J. (1994). Aerobic-anaerobic gene regulation in Escherichia coli: control by the ArcAB and Fnr regulons. Res Microbiol 145, 437-450.
-
(1994)
Res Microbiol
, vol.145
, pp. 437-450
-
-
Gunsalus, R.P.1
Park, S.J.2
-
16
-
-
0032934360
-
1, nitrite reductase) in Pseudomonas stutzeri during the transition from aerobic respiration to denitrification: Evidence for a denitrification-specific nitrate- and nitrite-responsive regulatory system
-
1, nitrite reductase) in Pseudomonas stutzeri during the transition from aerobic respiration to denitrification: evidence for a denitrification-specific nitrate- and nitrite-responsive regulatory system. J Bacteriol 181, 161-166.
-
(1999)
J Bacteriol
, vol.181
, pp. 161-166
-
-
Härtig, E.1
Zumft, W.G.2
-
17
-
-
0032529962
-
Activation of a consensus FNR-dependent promoter by DNR of Pseudomonas aeruginosa in response to nitrite
-
Hasegawa, N., Arai, H. & Igarashi, Y. (1998). Activation of a consensus FNR-dependent promoter by DNR of Pseudomonas aeruginosa in response to nitrite. FEMS Microbiol Lett 166, 213-217.
-
(1998)
FEMS Microbiol Lett
, vol.166
, pp. 213-217
-
-
Hasegawa, N.1
Arai, H.2
Igarashi, Y.3
-
18
-
-
0021111879
-
Compilation and analysis of Escherichia coli promoter DNA sequences
-
Hawley, D. K. & McClure, W. R. (1983). Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res 11, 2237-2255.
-
(1983)
Nucleic Acids Res
, vol.11
, pp. 2237-2255
-
-
Hawley, D.K.1
McClure, W.R.2
-
19
-
-
0026011830
-
1-dependent nitrite respiration of Pseudomonas stutzeri consists of a cluster of mono-, di-, and tetraheme proteins
-
1-dependent nitrite respiration of Pseudomonas stutzeri consists of a cluster of mono-, di-, and tetraheme proteins. FEBS Lett 279, 205-209.
-
(1991)
FEBS Lett
, vol.279
, pp. 205-209
-
-
Jüngst, A.1
Wakabayashi, S.2
Matsubara, H.3
Zumft, W.G.4
-
21
-
-
0028960504
-
Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA binding
-
Khoroshilova, N., Beinert, H. & Kiley, P. J. (1995). Association of a polynuclear iron-sulfur center with a mutant FNR protein enhances DNA binding. Proc Natl Acad Sci USA 92, 2499-2503.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 2499-2503
-
-
Khoroshilova, N.1
Beinert, H.2
Kiley, P.J.3
-
22
-
-
0027340210
-
1-type nitrite reductase from, and the absence of a copper-type nitrite reductase from, the aerobic denitrifier Thiosphaera pantotropha; the role of pseudoazurin as an electron donor
-
1-type nitrite reductase from, and the absence of a copper-type nitrite reductase from, the aerobic denitrifier Thiosphaera pantotropha; the role of pseudoazurin as an electron donor. Eur J Biochem 212, 377-385.
-
(1993)
Eur J Biochem
, vol.212
, pp. 377-385
-
-
Moir, J.W.B.1
Baratta, D.2
Richardson, D.J.3
Ferguson, S.J.4
-
23
-
-
0029125387
-
The expression of redox proteins of denitrification in Thiosphaera pantotropha grown with oxygen, nitrate, and nitrous-oxide as electron-acceptors
-
Moir, J. W. B., Richardson, D. J. & Ferguson, S. J. (1995). The expression of redox proteins of denitrification in Thiosphaera pantotropha grown with oxygen, nitrate, and nitrous-oxide as electron-acceptors. Arch Microbiol 164, 43-49.
-
(1995)
Arch Microbiol
, vol.164
, pp. 43-49
-
-
Moir, J.W.B.1
Richardson, D.J.2
Ferguson, S.J.3
-
24
-
-
0027296909
-
Cloning and sequencing of a gene encoding nitrite reductase from Paracoccus denitrificans and expression of the gene in Escherichia coli
-
Ohshima, T., Sugiyama, M., Uozumi, N., Iljima, S. & Kobayashi, T. (1993). Cloning and sequencing of a gene encoding nitrite reductase from Paracoccus denitrificans and expression of the gene in Escherichia coli. J Ferment Bioeng 76, 82-88.
-
(1993)
J Ferment Bioeng
, vol.76
, pp. 82-88
-
-
Ohshima, T.1
Sugiyama, M.2
Uozumi, N.3
Iljima, S.4
Kobayashi, T.5
-
25
-
-
0032943528
-
A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the creation of Paracoccus pantotrophus comb. nov
-
Rainey, F. A., Kelly, D. P., Stackebrandt E., Burghardt, J., Hiraishi, A., Katayama, Y. & Wood, A. P. (1999). A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the creation of Paracoccus pantotrophus comb. nov. Int J Syst Bacteriol 49, 645-651.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 645-651
-
-
Rainey, F.A.1
Kelly, D.P.2
Stackebrandt, E.3
Burghardt, J.4
Hiraishi, A.5
Katayama, Y.6
Wood, A.P.7
-
27
-
-
0001328962
-
Thiosphaera pantotropha gen. nov. sp. nov., a facultatively anaerobic, facultatively autotrophic sulphur bacterium
-
Robertson, L. A. & Kuenen, J. G. (1983). Thiosphaera pantotropha gen. nov. sp. nov., a facultatively anaerobic, facultatively autotrophic sulphur bacterium. J Gen Microbiol 129, 2847-2855.
-
(1983)
J Gen Microbiol
, vol.129
, pp. 2847-2855
-
-
Robertson, L.A.1
Kuenen, J.G.2
-
28
-
-
0028787099
-
Confirmation of aerobic denitrification in batch cultures, using gas-chromatography and N-15 mass-spectrometry
-
Robertson, L. A., Dalsgaard, T., Revsbech, N. P. & Kuenen, J. G. (1995). Confirmation of aerobic denitrification in batch cultures, using gas-chromatography and N-15 mass-spectrometry. FEMS Microbiol Ecol 18, 113-119.
-
(1995)
FEMS Microbiol Ecol
, vol.18
, pp. 113-119
-
-
Robertson, L.A.1
Dalsgaard, T.2
Revsbech, N.P.3
Kuenen, J.G.4
-
29
-
-
0003903343
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
0032820729
-
Transcription regulation of the nir gene cluster encoding nitrite reductasc of Paracoccus denitrificans involves NNR and NirI, a novel type of membrane protein
-
Saunders, N. F. W., Houben, E. N. G., Koefoed, S., de Weert, S., Reijnders, W. N. M., Westerhoff, H. V., De Boer, A. P. N. & van Spanning, R. J. M. (1999). Transcription regulation of the nir gene cluster encoding nitrite reductasc of Paracoccus denitrificans involves NNR and NirI, a novel type of membrane protein. Mol Microbiol 34, 24-36.
-
(1999)
Mol Microbiol
, vol.34
, pp. 24-36
-
-
Saunders, N.F.W.1
Houben, E.N.G.2
Koefoed, S.3
De Weert, S.4
Reijnders, W.N.M.5
Westerhoff, H.V.6
De Boer, A.P.N.7
Van Spanning, R.J.M.8
-
31
-
-
0031464531
-
Effect of carbon substrate and aeration on nitrate reduction and expression of the periplasmic and membrane-bound nitrate reductases in carbon-limited continuous cultures of Paracoccus denitrificans Pd1222
-
Sears, H. J., Spiro, S. & Richardson, D. J. (1997). Effect of carbon substrate and aeration on nitrate reduction and expression of the periplasmic and membrane-bound nitrate reductases in carbon-limited continuous cultures of Paracoccus denitrificans Pd1222. Microbiology 143, 3767-3774.
-
(1997)
Microbiology
, vol.143
, pp. 3767-3774
-
-
Sears, H.J.1
Spiro, S.2
Richardson, D.J.3
-
32
-
-
0024980259
-
Nitrite reductase from Pseudomonas aeruginosa: Sequence of the gene and the protein
-
Silvestrini, M. C., Galeotti, C. L., Gervais, M., Schininà, E., Barra, D., Bossa, F. & Brunori, M. (1989). Nitrite reductase from Pseudomonas aeruginosa: sequence of the gene and the protein. FEBS Lett 254, 33-38.
-
(1989)
FEBS Lett
, vol.254
, pp. 33-38
-
-
Silvestrini, M.C.1
Galeotti, C.L.2
Gervais, M.3
Schininà, E.4
Barra, D.5
Bossa, F.6
Brunori, M.7
-
33
-
-
0026500942
-
Isolation and characterization of a nitrite reductase gene and its use as a probe for denitrifying bacteria
-
Smith, G. B. & Tiedje, J. M. (1992). Isolation and characterization of a nitrite reductase gene and its use as a probe for denitrifying bacteria. Appl Environ Microbiol 58, 376-384.
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 376-384
-
-
Smith, G.B.1
Tiedje, J.M.2
-
34
-
-
0031037665
-
FnrP and Nnr of Paracoccus denitrificans are both members of the Fnr family of transcriptional activators but have distinct roles in respiratory adaptation in response to oxygen limitation
-
van Spanning, R. J. M., de Boer, A. P. N., Reijnders, W. N. M., Westerhoff, H. V., Stouthamer, A. H. & van der Oost, J. (1997). FnrP and Nnr of Paracoccus denitrificans are both members of the Fnr family of transcriptional activators but have distinct roles in respiratory adaptation in response to oxygen limitation. Mol Microbiol 23, 893-907.
-
(1997)
Mol Microbiol
, vol.23
, pp. 893-907
-
-
Van Spanning, R.J.M.1
De Boer, A.P.N.2
Reijnders, W.N.M.3
Westerhoff, H.V.4
Stouthamer, A.H.5
Van Der Oost, J.6
-
35
-
-
0032987041
-
Nitric oxide is a signal for NNR-mediated transcription activation in Paracoccus denitrificans
-
van Spanning, R. J. M., Houben, E., Reijnders, W. M. N., Spiro, S., Westerhoff, H. V. & Saunders, N. F. W. (1999). Nitric oxide is a signal for NNR-mediated transcription activation in Paracoccus denitrificans. J Bacteriol 181, 4129-4132.
-
(1999)
J Bacteriol
, vol.181
, pp. 4129-4132
-
-
Van Spanning, R.J.M.1
Houben, E.2
Reijnders, W.M.N.3
Spiro, S.4
Westerhoff, H.V.5
Saunders, N.F.W.6
-
36
-
-
0024989737
-
FNR and its role in oxygen-regulated gene-expression in Escherichia colt
-
Spiro, S. & Guest, J. R. (1990). FNR and its role in oxygen-regulated gene-expression in Escherichia colt. FEMS Microbiol Rev 75, 399-428.
-
(1990)
FEMS Microbiol Rev
, vol.75
, pp. 399-428
-
-
Spiro, S.1
Guest, J.R.2
-
37
-
-
0031017493
-
Emerging principles of inorganic nitrogen metabolism in Paracoccus denitrificans and related bacteria
-
Stouthamer, A. H., de Boer, A. P. N., van der Oost, J. & van Spanning, R. J. M. (1997). Emerging principles of inorganic nitrogen metabolism in Paracoccus denitrificans and related bacteria. Antonie Leeuwenhoek 71, 33-41.
-
(1997)
Antonie Leeuwenhoek
, vol.71
, pp. 33-41
-
-
Stouthamer, A.H.1
De Boer, A.P.N.2
Van Der Oost, J.3
Van Spanning, R.J.M.4
-
38
-
-
0031047127
-
Characterization and regulation of the gene encoding nitrite reductase in Rhodobacter sphaeroides 2.4.3
-
Tosques, I. E., Kwiatkowski, A. V., Shi, J. & Shapleigh, J. P. (1997). Characterization and regulation of the gene encoding nitrite reductase in Rhodobacter sphaeroides 2.4.3. J Bacteriol 179, 1090-1095.
-
(1997)
J Bacteriol
, vol.179
, pp. 1090-1095
-
-
Tosques, I.E.1
Kwiatkowski, A.V.2
Shi, J.3
Shapleigh, J.P.4
-
39
-
-
0033060309
-
Multiple transcription factors of the FNR family in denitrifying Pseudomonas stutzeri: Characterization of four fnr-like genes, regulatory responses and cognate metabolic processes
-
Vollack, K. U., Hartig, E., Korner, H. & Zumft, W. G. (1999). Multiple transcription factors of the FNR family in denitrifying Pseudomonas stutzeri: characterization of four fnr-like genes, regulatory responses and cognate metabolic processes. Mol Microbiol 31, 1681-1694.
-
(1999)
Mol Microbiol
, vol.31
, pp. 1681-1694
-
-
Vollack, K.U.1
Hartig, E.2
Korner, H.3
Zumft, W.G.4
-
40
-
-
0031456471
-
Cell biology and molecular basis of denitrification
-
Zumft, W. G. (1997). Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev 61, 533-616.
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 533-616
-
-
Zumft, W.G.1
|