-
1
-
-
0025297285
-
Codon preferences in free-living microorganisms
-
Andersson SGE, Kurland CG (1990) Codon preferences in free-living microorganisms. Microbiol Rev 54:198-210
-
(1990)
Microbiol Rev
, vol.54
, pp. 198-210
-
-
Andersson, S.G.E.1
Kurland, C.G.2
-
3
-
-
0022472187
-
Neighboring base effects on substitution rates in pseudogenes
-
Bulmer M (1986) Neighboring base effects on substitution rates in pseudogenes. Mol Biol Evol 3:322-329
-
(1986)
Mol Biol Evol
, vol.3
, pp. 322-329
-
-
Bulmer, M.1
-
4
-
-
0025348395
-
Suppression of the negative effect of minor arginine codons on gene expression; Preferential usage of minor codons within the first 25 codons of the Escherichia coli genes
-
Chen GT, Inouye M (1990) Suppression of the negative effect of minor arginine codons on gene expression; Preferential usage of minor codons within the first 25 codons of the Escherichia coli genes. Nucleic Acids Res 18:1465-1473
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 1465-1473
-
-
Chen, G.T.1
Inouye, M.2
-
5
-
-
0027960812
-
Role of the AGA/AGG codons, the rarest codons in global gene expression in Escherichia coli
-
Chen GT, Inouye M (1994) Role of the AGA/AGG codons, the rarest codons in global gene expression in Escherichia coli. Genes Dev 8:2641-2652
-
(1994)
Genes Dev
, vol.8
, pp. 2641-2652
-
-
Chen, G.T.1
Inouye, M.2
-
6
-
-
0025775913
-
Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins
-
D'Onofrio G, Mouchiroud D, Aissani B, Gautier C, Bernardi G (1991) Correlations between the compositional properties of human genes, codon usage, and amino acid composition of proteins. J Mol Evol 32:504-510
-
(1991)
J Mol Evol
, vol.32
, pp. 504-510
-
-
D'Onofrio, G.1
Mouchiroud, D.2
Aissani, B.3
Gautier, C.4
Bernardi, G.5
-
7
-
-
0027432923
-
Reduced synonymous substitution rate at the start of enterobacterial genes
-
Eyre-Walker A, Bulmer M (1993) Reduced synonymous substitution rate at the start of enterobacterial genes. Nucleic Acids Res 21: 4599-4603
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 4599-4603
-
-
Eyre-Walker, A.1
Bulmer, M.2
-
8
-
-
0031020582
-
Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria
-
Foster PG, Jermiin LS, Hickey DA (1997) Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria. J Mol Evol 44:282-288
-
(1997)
J Mol Evol
, vol.44
, pp. 282-288
-
-
Foster, P.G.1
Jermiin, L.S.2
Hickey, D.A.3
-
9
-
-
0023372221
-
Codon contexts in enterobacterial and coliphage genes
-
Gouy M (1987) Codon contexts in enterobacterial and coliphage genes. Mol Biol Evol 4:426-444
-
(1987)
Mol Biol Evol
, vol.4
, pp. 426-444
-
-
Gouy, M.1
-
10
-
-
0030012885
-
Preference for guanosine at first codon position in highly expressed Escherichia coli genes. A relationship with translational efficiency
-
Gutierrez G, Marquez L, Marin A (1996) Preference for guanosine at first codon position in highly expressed Escherichia coli genes. A relationship with translational efficiency. Nucleic Acids Res 24: 2525-2527
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2525-2527
-
-
Gutierrez, G.1
Marquez, L.2
Marin, A.3
-
11
-
-
0021958933
-
Codon usage and tRNA content in unicellular and multicellular organisms
-
Ikemura T (1985) Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2:13-35
-
(1985)
Mol Biol Evol
, vol.2
, pp. 13-35
-
-
Ikemura, T.1
-
12
-
-
0022881350
-
Silent nucleotide substitutions and G + C content of some mitochondrial and bacterial genes
-
Jukes TT, Bhurshan V (1986) Silent nucleotide substitutions and G + C content of some mitochondrial and bacterial genes. J Mol Evol 24:39-44
-
(1986)
J Mol Evol
, vol.24
, pp. 39-44
-
-
Jukes, T.T.1
Bhurshan, V.2
-
13
-
-
0030569016
-
What drives codon choices in human genes?
-
Karlin S, Mrazek J (1996) What drives codon choices in human genes? J Mol Biol 262:459-472
-
(1996)
J Mol Biol
, vol.262
, pp. 459-472
-
-
Karlin, S.1
Mrazek, J.2
-
14
-
-
0028088517
-
Hydrophobicity, expressivity and aromaticity are the major trends of amino acid usage in 999 Escherichia coli chromosome-encoded genes
-
Lobry JR, Gautier C (1994) Hydrophobicity, expressivity and aromaticity are the major trends of amino acid usage in 999 Escherichia coli chromosome-encoded genes. Nucleic Acids Res 22:3174-3180
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3174-3180
-
-
Lobry, J.R.1
Gautier, C.2
-
15
-
-
15844423271
-
Site-specific codon bias in bacteria
-
Maynard Smith J, Smith NH (1996) Site-specific codon bias in bacteria. Genetics 142:1037-1043
-
(1996)
Genetics
, vol.142
, pp. 1037-1043
-
-
Maynard Smith, J.1
Smith, N.H.2
-
16
-
-
0027328291
-
Chloroplast DNA codon use: Evidence for selection at the psbA locus based on tRNA availability
-
Morton BR (1993) Chloroplast DNA codon use: Evidence for selection at the psbA locus based on tRNA availability. J Mol Evol 37:273-280
-
(1993)
J Mol Evol
, vol.37
, pp. 273-280
-
-
Morton, B.R.1
-
17
-
-
0029820342
-
Selection on the codon bias of Chlamydomonas reinhardtii chloroplast genes and the plant psbA gene
-
Morton BR (1996) Selection on the codon bias of Chlamydomonas reinhardtii chloroplast genes and the plant psbA gene. J Mol Evol 43:28-31
-
(1996)
J Mol Evol
, vol.43
, pp. 28-31
-
-
Morton, B.R.1
-
18
-
-
0031979388
-
Selection on the codon bias of chloroplast and cyanelle genes in different plant and algal lineages
-
Morton BR (1998) Selection on the codon bias of chloroplast and cyanelle genes in different plant and algal lineages. J Mol Evol 46:449-459
-
(1998)
J Mol Evol
, vol.46
, pp. 449-459
-
-
Morton, B.R.1
-
19
-
-
0008588675
-
Codon bias and the context dependency of nucleotide substitutions in the evolution of plastid DNA
-
in press
-
Morton BR (1999) Codon bias and the context dependency of nucleotide substitutions in the evolution of plastid DNA. Evol Biol (in press)
-
(1999)
Evol Biol
-
-
Morton, B.R.1
-
20
-
-
0021633530
-
Codon context effects in missense suppression
-
Murgola EJ, Pagel FT, Hijazi KA (1984) Codon context effects in missense suppression. J Mol Biol 175:19-27
-
(1984)
J Mol Biol
, vol.175
, pp. 19-27
-
-
Murgola, E.J.1
Pagel, F.T.2
Hijazi, K.A.3
-
21
-
-
0028948605
-
Correlation between codon usage, regional genomic nucleotide composition, and amino acid composition in the cytochrome P-450 gene superfamily
-
Porter TD (1995) Correlation between codon usage, regional genomic nucleotide composition, and amino acid composition in the cytochrome P-450 gene superfamily. Biochim Biophys Acta 1261:394-400
-
(1995)
Biochim Biophys Acta
, vol.1261
, pp. 394-400
-
-
Porter, T.D.1
-
22
-
-
0026002819
-
Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: Codon usage, map position, and concerted evolution
-
Sharp PM (1991) Determinants of DNA sequence divergence between Escherichia coli and Salmonella typhimurium: Codon usage, map position, and concerted evolution. J Mol Evol 33:23-33
-
(1991)
J Mol Evol
, vol.33
, pp. 23-33
-
-
Sharp, P.M.1
-
23
-
-
0023650543
-
The codon adaptation index - A measure of directional synonymous codon usage bias, and its potential applications
-
Sharp PM, Li WH (1987) The codon adaptation index - A measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15:1281-1295
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
24
-
-
0028631919
-
Codon usage and genome evolution
-
Sharp PM, Matassi G (1994) Codon usage and genome evolution. Curr Opin Gen Dev 4:851-860
-
(1994)
Curr Opin Gen Dev
, vol.4
, pp. 851-860
-
-
Sharp, P.M.1
Matassi, G.2
-
25
-
-
0022616874
-
Constraints on codon context in Escherichia coli genes. Their possible role in modulating the efficiency of translation
-
Shpaer EG (1986) Constraints on codon context in Escherichia coli genes. Their possible role in modulating the efficiency of translation. J Mol Biol 188:555-564
-
(1986)
J Mol Biol
, vol.188
, pp. 555-564
-
-
Shpaer, E.G.1
-
26
-
-
73049156042
-
Compositional correlation between deoxyribonucleic acid and protein
-
Sueoka N (1961) Compositional correlation between deoxyribonucleic acid and protein. Cold Spring Harbor Symp Quant Biol 26:35-43
-
(1961)
Cold Spring Harbor Symp Quant Biol
, vol.26
, pp. 35-43
-
-
Sueoka, N.1
-
27
-
-
0022405085
-
Sense codons are found in specific contexts
-
Yarus M, Folley LS (1985) Sense codons are found in specific contexts. J Mol Biol 182:529-540
-
(1985)
J Mol Biol
, vol.182
, pp. 529-540
-
-
Yarus, M.1
Folley, L.S.2
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