RNase III processing of intervening sequences found in helix 9 of 23S rRNA in the alpha subclass of Proteobacteria

Journal of Bacteriology

Volumn 182, Issue 17, 2000, Pages 4719-4729

  Evguenieva Hackenberg, E ^a   Klug, G ^a  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

RIBONUCLEASE III;

ARTICLE; BACTERIOPHAGE; BARTONELLA; DNA SEQUENCE; ENZYME SPECIFICITY; ENZYME STRUCTURE; GENE TRANSFER; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; RHIZOBIUM; RHODOBACTER; RHODOPSEUDOMONAS; SEQUENCE ANALYSIS; SINORHIZOBIUM;

ALPHAPROTEOBACTERIA; BASE SEQUENCE; ENDORIBONUCLEASES; ESCHERICHIA COLI PROTEINS; INTRONS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; RIBONUCLEASE III; RNA; RNA PROCESSING, POST-TRANSCRIPTIONAL; RNA, BACTERIAL; RNA, RIBOSOMAL, 23S;

ALPHAPROTEOBACTERIA; BARTONELLA; ESCHERICHIA COLI; NEGIBACTERIA; PROKARYOTA; PROTEOBACTERIA; RHIZOBIUM; RHODOBACTER CAPSULATUS; RHODOPSEUDOMONAS; SINORHIZOBIUM;

EID: 0033901449     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.182.17.4719-4729.2000     Document Type: Article

References (39)

1. Rhizobium gallicum sp. nov. and Rhizobium giardinii sp. nov., from Phaseolus vulgaris nodules
2. R-factor transfer in Rhizobium leguminosarum
3. The excision of intervening sequences from Salmonella 23S ribosomal RNA
4. Different cleavage specificities of RNases III from Rhodobacter capsulatus and Escherichia coli
5. Localization and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides
6. Ribonuclease III
7. Variability of the 5'-end of the large subunit rDNA and the presence of a new short class of rRNA in Rhizobiaceae
8. Effect of the pufQ-pufB intercistronic region on puf mRNA stability in Rhodobacter capsulatus
9. Complete nucleotide sequence of a 23S ribosomal RNA gene from Rhodobacter capsulatus
10. Diversity of cleavage patterns of Salmonella 23S rRNA
11. Sequence similarities between large subunit ribosomal RNA gene intervening sequences from different Helicobacter species
12. Processing of procaryotic ribosomal RNA
13. Construction of a gene bank of Rhodopseudomonas capsulata using a broad host range cloning system
14. Cloning of a gene involved in rRNA precursor processing and 23S rRNA cleavage in Rhodobacter capsulatus
15. A single rRNA gene region in Bradyrhizobium japonicum
16. Mobilization of the genes for photosynthesis from Rhodopseudomonas capsulata by a promiscuous plasmid
17. 23S precursor ribosomal RNA of Rhodopseudomonas sphaeroides
18. Expanded sequence dependence of thermodynamic parameters provides robust prediction of RNA secondary structure
19. Salmonella tyhimurium LT2 possesses three distinct 23S rRNA intervening sequences
20. Nucleotide sequence analysis of the 23S ribosomal RNA-encoding gene of Bartonella bacilliformis
21. Fragmentation of 23S rRNA in strains of proteus and Providencia results from intervening sequences in the rrn (rRNA) genes
22. Function, mechanism and regulation of bacterial ribonucleases
23. Sequence and characterization of a ribosomal RNA operon from Agrobacterium vitis
24. Intervening sequence with conserved open reading frame in eubacterial 23S rRNA genes
25. Identification and analysis of the rnc gene for RNase III in Rhodobacter capsulatus
26. Fragmentations of the large-subunit rRNA in the family Rhizobiaceae
27. Unusual organization of the 23S rRNA genes in Rhizobiaceae
28. Sequences around the fragmentation sites of the large subunit ribosomal RRNA in the family Rhizobiaceae
29. Intervening sequences (IVSs) in the 23S ribosomal RNA genes of pathogenic Yersinia enterocolitica strains. The IVSs in Y. enterocolitica and Salmonella typhimurium have a common origin
30. Transfer of chromosomal genes mediated by plasmid R68
31. Fragmentation heterogeneity of 23S ribosomal RNA in Haemophilus species
32. A 23S rRNA targeted specific hybridization probe for Bradyrhizobium japonicum
33. Phylogenetic and molecular characterization of a 23S rRNA gene positions the genus Campy-lobacter in the epsilon subdivision of the Proteobacteria and shows that the presence of transcribed spacers is common in Campylobacter spp.
34. Decay of mRNA in Escherichia coli: Investigation of the fate of specific segments of transcripts
35. Characterization of a separate small domain derived from the 5' end of 23S rRNA of an α-proteobacterium
36. Regulation of ribonuclease III processing by double-helical sequence antideterminants
37. Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide