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Volumn 16, Issue 2, 2000, Pages 173-179

A rapid heuristic algorithm for finding minimum evolution trees

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EID: 0033857367     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1999.0728     Document Type: Article
Times cited : (4)

References (20)
  • 1
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution. 39:1985;783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 2
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny Inference Package (Version 3.2)
    • Felsenstein J. PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics. 5:1989;164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 3
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees
    • Fitch W. M., Margoliash E. Construction of phylogenetic trees. Science. 155:1967;279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 4
    • 0030807655 scopus 로고    scopus 로고
    • BIONJ: An improved version of the NJ algorithm based on a simple model of sequence data
    • Gascuel O. BIONJ: An improved version of the NJ algorithm based on a simple model of sequence data. Mol. Biol. Evol. 14:1997;685-695.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 685-695
    • Gascuel, O.1
  • 5
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa M., Kishino H., Yano T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:1985;160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 6
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis D. M., Bull J. J. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst. Biol. 42:1993;182-192.
    • (1993) Syst. Biol. , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 7
    • 85031615967 scopus 로고    scopus 로고
    • Huson, H, Nettles, S, and, Warnow, T. 1999, http://www.mathematik.uni-bielefeld.de/~huson/phylogenetics/DCM.html) .
    • (1999)
    • Huson, H.1    Nettles, S.2    Warnow, T.3
  • 8
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • H. N. Munro. New York: Academic Press
    • Jukes T. H., Cantor C. R. Evolution of protein molecules. Munro H. N. Mammalian Protein Metabolism. 1969;21-132 Academic Press, New York.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 9
    • 0029917260 scopus 로고    scopus 로고
    • A stepwise algorithm for finding minimum evolution trees
    • Kumar S. A stepwise algorithm for finding minimum evolution trees. Mol. Biol. Evol. 13:1996;584-593.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 584-593
    • Kumar, S.1
  • 10
    • 0030458552 scopus 로고    scopus 로고
    • Phylogenetic analysis in molecular evolutionary genetics
    • Nei M. Phylogenetic analysis in molecular evolutionary genetics. Annu. Rev. Genet. 30:1996;371-403.
    • (1996) Annu. Rev. Genet. , vol.30 , pp. 371-403
    • Nei, M.1
  • 11
    • 0032514671 scopus 로고    scopus 로고
    • The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small
    • Nei M., Kumar S., Takahashi K. The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small. Proc. Natl. Acad. Sci. USA. 95:1998;12390-12397.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 12390-12397
    • Nei, M.1    Kumar, S.2    Takahashi, K.3
  • 12
    • 0030928378 scopus 로고    scopus 로고
    • Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
    • Rambaut A., Grassly N. C. Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput. Appl. Biosci. 13:1997;235-238.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 235-238
    • Rambaut, A.1    Grassly, N.C.2
  • 14
    • 0026466041 scopus 로고
    • Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference
    • Rzhetsky A., Nei M. Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference. J. Mol. Evol. 35:1992;367-375.
    • (1992) J. Mol. Evol. , vol.35 , pp. 367-375
    • Rzhetsky, A.1    Nei, M.2
  • 15
    • 0027185401 scopus 로고
    • Theoretical foundation of the minimum-evolution method of phylogenetic inference
    • Rzhetsky A., Nei M. Theoretical foundation of the minimum-evolution method of phylogenetic inference. Mol. Biol. Evol. 10:1993;1073-1095.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 1073-1095
    • Rzhetsky, A.1    Nei, M.2
  • 16
    • 0023375195 scopus 로고    scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:1997;406-425.
    • (1997) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 17
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z. PAML: A program package for phylogenetic analysis by maximum likelihood. CABIOS. 13:1997;555-556.
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1
  • 18
    • 0026443498 scopus 로고
    • Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock
    • Zharkikh A., Li W. H. Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock. Mol. Biol. Evol. 9:1992a;1119-1147.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 1119-1147
    • Zharkikh, A.1    Li, W.H.2
  • 19
    • 0026484750 scopus 로고
    • Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. II. Four taxa without a molecular clock
    • Zharkikh A., Li W. H. Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. II. Four taxa without a molecular clock. J. Mol. Evol. 35:1992b;356-366.
    • (1992) J. Mol. Evol. , vol.35 , pp. 356-366
    • Zharkikh, A.1    Li, W.H.2
  • 20
    • 0029261787 scopus 로고
    • Estimation of confidence in phylogeny: The complete-and-partial bootstrap technique
    • Zharkikh A., Li W. H. Estimation of confidence in phylogeny: The complete-and-partial bootstrap technique. Mol. Phylogenet. Evol. 4:1995;44-63.
    • (1995) Mol. Phylogenet. Evol. , vol.4 , pp. 44-63
    • Zharkikh, A.1    Li, W.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.