-
1
-
-
0031793928
-
Iterated profile searches with PSI-BLAST - A tool for discovery in protein databases
-
Altschul SF, Koonin EV. 1998. Iterated profile searches with PSI-BLAST - A tool for discovery in protein databases. Trends Biochem Sci 23:444-447.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 444-447
-
-
Altschul, S.F.1
Koonin, E.V.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0027216772
-
Solution structure of a pair of complement modules by nuclear magnetic resonance
-
Barlow PN, Steinkasserer A, Norman DG, Kieffer B, Wiles AP, Sim RB, Campbell ID. 1993. Solution structure of a pair of complement modules by nuclear magnetic resonance. J Mol Biol 232:268-284.
-
(1993)
J Mol Biol
, vol.232
, pp. 268-284
-
-
Barlow, P.N.1
Steinkasserer, A.2
Norman, D.G.3
Kieffer, B.4
Wiles, A.P.5
Sim, R.B.6
Campbell, I.D.7
-
5
-
-
0032952229
-
Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins
-
Bateman A, Birney E, Durbin R, Eddy SR, Finn RD, Sonnhammer EL. 1999. Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins. Nucleic Acids Res 27:260-262.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 260-262
-
-
Bateman, A.1
Birney, E.2
Durbin, R.3
Eddy, S.R.4
Finn, R.D.5
Sonnhammer, E.L.6
-
6
-
-
0028774038
-
Crystal structure of the extracellular region of the human cell adhesion molecule CD2 at 2.5 Å resolution
-
Bodian DL, Jones EY, Harlos K, Stuart DI, Davis SI. 1994. Crystal structure of the extracellular region of the human cell adhesion molecule CD2 at 2.5 Å resolution. Structure 2:755-766.
-
(1994)
Structure
, vol.2
, pp. 755-766
-
-
Bodian, D.L.1
Jones, E.Y.2
Harlos, K.3
Stuart, D.I.4
Davis, S.I.5
-
7
-
-
0003338119
-
A proposed nomenclature for the extracellular protein modules of animals
-
Poster CO2
-
Bork P, Bairoch A. 1995. A proposed nomenclature for the extracellular protein modules of animals. Trends Biochem Sci 20(3): Poster CO2.
-
(1995)
Trends Biochem Sci
, vol.20
, Issue.3
-
-
Bork, P.1
Bairoch, A.2
-
8
-
-
0026644395
-
Proposed acquisition of an animal protein domain by bacteria
-
Bork P. Doolittle RF. 1992. Proposed acquisition of an animal protein domain by bacteria. Proc Natl Acad Sci USA 89:8990-8994.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 8990-8994
-
-
Bork, P.1
Doolittle, R.F.2
-
10
-
-
0028172534
-
The immunoglobulin fold. Structural classification, sequence patterns and common core
-
Bork P, Holm L, Sander C. 1994. The immunoglobulin fold. Structural classification, sequence patterns and common core. J Mol Biol 242:309-320.
-
(1994)
J Mol Biol
, vol.242
, pp. 309-320
-
-
Bork, P.1
Holm, L.2
Sander, C.3
-
11
-
-
0033555277
-
The structure of a PKD domain from polycystin-1: Implications for polycystic kidney disease
-
Bycroft M, Bateman A, Clarke J, Hamill SJ, Sandford R, Thomas RL, Chotia C. 1999. The structure of a PKD domain from polycystin-1: Implications for polycystic kidney disease EMBO J 18:297-305.
-
(1999)
EMBO J
, vol.18
, pp. 297-305
-
-
Bycroft, M.1
Bateman, A.2
Clarke, J.3
Hamill, S.J.4
Sandford, R.5
Thomas, R.L.6
Chotia, C.7
-
12
-
-
0032991918
-
The BAH (Bromo-Adjacent Homology) domain: A link between methylation, replication and transcriptional regulation
-
Callebaut I, Courvalin JC, Mornon JP. 1999. The BAH (Bromo-Adjacent Homology) domain: A link between methylation, replication and transcriptional regulation. FEBS Lett 446:189-193.
-
(1999)
FEBS Lett
, vol.446
, pp. 189-193
-
-
Callebaut, I.1
Courvalin, J.C.2
Mornon, J.P.3
-
13
-
-
0030690133
-
Deciphering protein sequence information through hydrophobic cluster analysis (HCA): Current status and perspectives
-
Callebaut I, Labesse G, Durand P, Poupon A, Canard L, Chomilier J, Henrissat B, Mornon JP. 1997. Deciphering protein sequence information through hydrophobic cluster analysis (HCA): Current status and perspectives. Cell Mol Life Sci 53:621-645.
-
(1997)
Cell Mol Life Sci
, vol.53
, pp. 621-645
-
-
Callebaut, I.1
Labesse, G.2
Durand, P.3
Poupon, A.4
Canard, L.5
Chomilier, J.6
Henrissat, B.7
Mornon, J.P.8
-
14
-
-
0028773478
-
Building proteins with fibronectin type III modules
-
Campbell ID, Spitzfaden C. 1994. Building proteins with fibronectin type III modules. Structure 2:333-337.
-
(1994)
Structure
, vol.2
, pp. 333-337
-
-
Campbell, I.D.1
Spitzfaden, C.2
-
15
-
-
0033551911
-
X-ray structure of the FimC-FimH chaperone-adhesin complex from uropathogenic Escherichia coli
-
Choudhury D, Thompson A, Stojanoff V, Langermann S, Pinkner J, Hultgren SJ, Knight SD. 1999. X-ray structure of the FimC-FimH chaperone-adhesin complex from uropathogenic Escherichia coli. Science 285:1061-1066.
-
(1999)
Science
, vol.285
, pp. 1061-1066
-
-
Choudhury, D.1
Thompson, A.2
Stojanoff, V.3
Langermann, S.4
Pinkner, J.5
Hultgren, S.J.6
Knight, S.D.7
-
16
-
-
0032420333
-
JPred: A consensus secondary structure prediction server
-
Cuff JA, Clamp ME, Siddiqui AS, Finlay M, Barton GJ. 1998. JPred: A consensus secondary structure prediction server. Bioinformatics 14:892-893.
-
(1998)
Bioinformatics
, vol.14
, pp. 892-893
-
-
Cuff, J.A.1
Clamp, M.E.2
Siddiqui, A.S.3
Finlay, M.4
Barton, G.J.5
-
17
-
-
0031743421
-
Profile hidden Markov models
-
Eddy SR. 1998. Profile hidden Markov models. Bioinformatics 14:755-763.
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
-
18
-
-
0032961270
-
ESPript: Analysis of multiple sequence alignments in PostScript
-
Gouet P, Courcelle E, Stuart DI, Metoz F. 1999. ESPript: Analysis of multiple sequence alignments in PostScript. Bioinformatics 15:305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
19
-
-
0032773506
-
The immunoglobulin fold family: Sequence analysis and 3D structure comparisons
-
Halaby DM, Poupon A, Mornon JP. 1999. The immunoglobulin fold family: Sequence analysis and 3D structure comparisons. Protein Eng 12:563-571.
-
(1999)
Protein Eng
, vol.12
, pp. 563-571
-
-
Halaby, D.M.1
Poupon, A.2
Mornon, J.P.3
-
20
-
-
0028361540
-
Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains
-
Harpaz Y. Chotia C. 1994. Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains. J Mol Biol 238: 528-539.
-
(1994)
J Mol Biol
, vol.238
, pp. 528-539
-
-
Harpaz, Y.1
Chotia, C.2
-
21
-
-
0032944238
-
The PROSITE database, its status in 1999
-
Hofmann K, Bucher P, Falquet L, Bairoch A. 1999. The PROSITE database, its status in 1999. Nucleic Acids Res 27:215-219.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 215-219
-
-
Hofmann, K.1
Bucher, P.2
Falquet, L.3
Bairoch, A.4
-
22
-
-
0028351169
-
Crystal structure of tandem type III fibronectin domains from Drosophila neuroglian at 2.0 Å
-
Huber AH, Wang YM, Bieber AJ, Bjorkman PJ. 1994. Crystal structure of tandem type III fibronectin domains from Drosophila neuroglian at 2.0 Å. Neuron 12:717-731.
-
(1994)
Neuron
, vol.12
, pp. 717-731
-
-
Huber, A.H.1
Wang, Y.M.2
Bieber, A.J.3
Bjorkman, P.J.4
-
23
-
-
0030272010
-
Three-dimensional structure of cell adhesion molecules
-
Jones EY. 1996. Three-dimensional structure of cell adhesion molecules. Curr Opin Cell Biol 8:602-608.
-
(1996)
Curr Opin Cell Biol
, vol.8
, pp. 602-608
-
-
Jones, E.Y.1
-
24
-
-
0028924936
-
Crystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 Å resolution
-
Jones EY, Harlos K, Bottomley MJ, Robinson RC, Driscoll PC, Edwards RM, Clements JM, Dudgeon TJ, Stuart DI. 1995. Crystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 Å resolution. Nature 373:539-544.
-
(1995)
Nature
, vol.373
, pp. 539-544
-
-
Jones, E.Y.1
Harlos, K.2
Bottomley, M.J.3
Robinson, R.C.4
Driscoll, P.C.5
Edwards, R.M.6
Clements, J.M.7
Dudgeon, T.J.8
Stuart, D.I.9
-
25
-
-
0000243829
-
Molscript - A program to produce both detailed and schematic plots of protein structures
-
Kraulis PJ. 1991. Molscript - A program to produce both detailed and schematic plots of protein structures. J Appl Crystallogr 12:283-291.
-
(1991)
J Appl Crystallogr
, vol.12
, pp. 283-291
-
-
Kraulis, P.J.1
-
26
-
-
0026490256
-
Structure of a fibronectin lype III domain from tenascin phased by MAD analysis of selenomethyionyl protein
-
Leahy DJ, Hendrickson WA, Aukhil I, Erickson HP. 1992. Structure of a fibronectin lype III domain from tenascin phased by MAD analysis of selenomethyionyl protein. Science 258:987-991.
-
(1992)
Science
, vol.258
, pp. 987-991
-
-
Leahy, D.J.1
Hendrickson, W.A.2
Aukhil, I.3
Erickson, H.P.4
-
27
-
-
0027943212
-
Tracing the spread of fibronectin type III domains in bacterial glycohydrolases
-
Little E, Bork P, Doolittle RF. 1994. Tracing the spread of fibronectin type III domains in bacterial glycohydrolases. J Mol Evol 39:631-643.
-
(1994)
J Mol Evol
, vol.39
, pp. 631-643
-
-
Little, E.1
Bork, P.2
Doolittle, R.F.3
-
28
-
-
0028886728
-
A gene (SRPX) encoding a sushi-repeat-containing protein is deleted in patients with X-linked retinitis pigmentosa
-
Meindl A, Carvalho MRS, Herrmann K, Lorenz B, Achatz H, Lorenz B, Apfelstedt-Sylla E, Wittwer B, Ross M, Meitinger T. 1995. A gene (SRPX) encoding a sushi-repeat-containing protein is deleted in patients with X-linked retinitis pigmentosa. Hum Mol Genet 4:2339-2346.
-
(1995)
Hum Mol Genet
, vol.4
, pp. 2339-2346
-
-
Meindl, A.1
Carvalho, M.R.S.2
Herrmann, K.3
Lorenz, B.4
Achatz, H.5
Lorenz, B.6
Apfelstedt-Sylla, E.7
Wittwer, B.8
Ross, M.9
Meitinger, T.10
-
29
-
-
0028956981
-
Solution structure of the epithelial cadherin domain responsible for selective cell adhesion
-
Overduin M, Harvey TS, Bagby S, Tong KI, Yau P, Takeichi M, Ikura M. 1995. Solution structure of the epithelial cadherin domain responsible for selective cell adhesion. Science 267:386-389.
-
(1995)
Science
, vol.267
, pp. 386-389
-
-
Overduin, M.1
Harvey, T.S.2
Bagby, S.3
Tong, K.I.4
Yau, P.5
Takeichi, M.6
Ikura, M.7
-
30
-
-
0032919370
-
SMART: Identification and annotation of domains from signalling and extracellular protein sequences
-
Ponting CP, Schultz J, Milpetz F, Bork P. 1999. SMART: Identification and annotation of domains from signalling and extracellular protein sequences. Nucleic Acids Res 27:229-232.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 229-232
-
-
Ponting, C.P.1
Schultz, J.2
Milpetz, F.3
Bork, P.4
-
31
-
-
0024561914
-
Structure-function relationships of the complement components
-
Reid KBM, Day AJ. 1989. Structure-function relationships of the complement components. Immunol Today 6:177-180.
-
(1989)
Immunol Today
, vol.6
, pp. 177-180
-
-
Reid, K.B.M.1
Day, A.J.2
-
32
-
-
0039843096
-
Structural basis of chaperone function and pilus biogenesis
-
Sauer FG, Futterer K, Pinkner JS, Dodson KW, Hultgren SJ, Waksman G. 1999. Structural basis of chaperone function and pilus biogenesis. Science 285:1058-1061.
-
(1999)
Science
, vol.285
, pp. 1058-1061
-
-
Sauer, F.G.1
Futterer, K.2
Pinkner, J.S.3
Dodson, K.W.4
Hultgren, S.J.5
Waksman, G.6
-
33
-
-
0032918222
-
Infectionderived Enterococcus faecalis strains are enriched in esp. a gene encoding a novel surface protein
-
Shankar V, Baghdayan AS, Huycke MM, Lindahl G, Gilmore MS. 1999. Infectionderived Enterococcus faecalis strains are enriched in esp. a gene encoding a novel surface protein. Infect Immun 67:193-200.
-
(1999)
Infect Immun
, vol.67
, pp. 193-200
-
-
Shankar, V.1
Baghdayan, A.S.2
Huycke, M.M.3
Lindahl, G.4
Gilmore, M.S.5
-
34
-
-
0028986780
-
Structural basis of cell cell adhesion by cadherins
-
Shapiro L, Fannon AM, Kwong PD, Thomson A, Lehmann MS, Grubel G, Legrand JF, Alsnielsen J, Colman DR, Hendrickson WA. 1995a. Structural basis of cell cell adhesion by cadherins. Nature 374:306-307.
-
(1995)
Nature
, vol.374
, pp. 306-307
-
-
Shapiro, L.1
Fannon, A.M.2
Kwong, P.D.3
Thomson, A.4
Lehmann, M.S.5
Grubel, G.6
Legrand, J.F.7
Alsnielsen, J.8
Colman, D.R.9
Hendrickson, W.A.10
-
35
-
-
0029164589
-
Considerations on the folding topology and evolutionary origin of cadherin domains
-
Shapiro L, Kwong PD, Fannon AM, Colman DR, Hendrickson WA. 1995b. Considerations on the folding topology and evolutionary origin of cadherin domains. Proc Natl Acad Sci USA 92:6793-6797.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 6793-6797
-
-
Shapiro, L.1
Kwong, P.D.2
Fannon, A.M.3
Colman, D.R.4
Hendrickson, W.A.5
-
36
-
-
0345279861
-
The R28 protein of Streptococcus pyogenes is related to several group B streptococcal surface proteins, confers protective immunity and promotes binding to human epithelial cells
-
Stalhammar-Carlemalm M, Areschoug T, Larsson C, Lindahl G. 1999. The R28 protein of Streptococcus pyogenes is related to several group B streptococcal surface proteins, confers protective immunity and promotes binding to human epithelial cells. Mol Microbiol 33:208-219.
-
(1999)
Mol Microbiol
, vol.33
, pp. 208-219
-
-
Stalhammar-Carlemalm, M.1
Areschoug, T.2
Larsson, C.3
Lindahl, G.4
-
37
-
-
0033229842
-
The third chitinase gene (chiC) of Serratia marcescens 170 and the relationship of its product to other bacterial chitinases
-
Suzuki K, Taiyoji M, Sugawara N, Nikaidou N, Henrissat B, Watanabe T. 1999. The third chitinase gene (chiC) of Serratia marcescens 170 and the relationship of its product to other bacterial chitinases. Biochem J 343:587-596.
-
(1999)
Biochem J
, vol.343
, pp. 587-596
-
-
Suzuki, K.1
Taiyoji, M.2
Sugawara, N.3
Nikaidou, N.4
Henrissat, B.5
Watanabe, T.6
-
38
-
-
0029763036
-
Identification of a family of streptococcal surface proteins with extremely repetitive structure
-
Wästfelt M. Stälhammar-Carlemalm M, Delisse AM, Cabezon T, Lindahl G. 1996. Identification of a family of streptococcal surface proteins with extremely repetitive structure. J Biol Chem 271:18892-18897.
-
(1996)
J Biol Chem
, vol.271
, pp. 18892-18897
-
-
Wästfelt, M.1
Stälhammar-Carlemalm, M.2
Delisse, A.M.3
Cabezon, T.4
Lindahl, G.5
-
39
-
-
0032518438
-
A molecular analysis of hyalin, a substrate for cell adhesion in the hyaline layer of the sea urchin embryo
-
Wessel G, Berg L, Adelson DL, Cannon G, McClay DR. 1998. A molecular analysis of hyalin, a substrate for cell adhesion in the hyaline layer of the sea urchin embryo. Dev Biol 193:115-126.
-
(1998)
Dev Biol
, vol.193
, pp. 115-126
-
-
Wessel, G.1
Berg, L.2
Adelson, D.L.3
Cannon, G.4
McClay, D.R.5
|