Parking strategies for genome sequencing

Genome Research

Volumn 10, Issue 7, 2000, Pages 1020-1030

  Roach, Jared C ^a   Thorsson, Vesteinn ^a,b   Siegel, Andrew F ^a,b  

^a INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

ARTICLE; CONTROLLED STUDY; COST; DNA HYBRIDIZATION; DNA SEQUENCE; GENE SEQUENCE; GENETIC PARAMETERS; MATHEMATICAL MODEL; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

CLONING, MOLECULAR; COMPUTER SIMULATION; GENOME, HUMAN; GENOMIC LIBRARY; HUMANS; MODELS, GENETIC; MODELS, STATISTICAL; SEQUENCE ANALYSIS, DNA; SEQUENCE TAGGED SITES;

EID: 0033852257     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.10.7.1020     Document Type: Article

References (24)

1. Genomic mapping by anchoring random clones: A mathematical analysis
2. Poisson process approximation for sequence repeats, and sequencing by hybridization
3. On gaps generated by a random space filling procedure
4. Sequencing a genome by walking with clone-end sequences: A mathematical analysis
5. On the parking problem
6. Cooperative effects in random sequential polymer reactions
7. The random parking problem
8. Kinetics of random sequential parking on a line
9. Genomic mapping by fingerprinting random clones: A mathematical analysis
10. Optimized strategies for sequence-tagged-site selection in genome mapping
11. Genomic mapping by end-characterized random clones: A mathematical analysis
12. On a one-dimensional problem concerning random space-filling
13. Random subcloning
14. Random subcloning, pairwise end sequencing, and the molecular evolution of the vertebrate trypsinogens
15. Pairwise end sequencing: A unified approach to genomic mapping and sequencing
16. Gaps in the Human Genome Project
17. Expectation and Variance of True and False Fragment Matches in DNA Restriction Mapping
18. Optimization of restriction fragment DNA mapping
19. A review of the packing problem
20. Shotgun sequencing of the human genome
21. A new strategy for genome sequencing
22. Random sequential addition of hard spheres to a volume
23. Genome mapping by nonrandom anchoring: A discrete theoretical analysis