Recent developments in cryo-electron microscopy reconstruction of single particles

Current Opinion in Structural Biology

Volumn 10, Issue 5, 2000, Pages 616-622

  Tao, Yizhi ^a   Zhang, Wei ^b  

^a HARVARD UNIVERSITY   (United States)

^b PURDUE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOMATION; COMPUTER PROGRAM; CRYOELECTRON MICROSCOPY; IMAGE RECONSTRUCTION; PRIORITY JOURNAL; THREE DIMENSIONAL IMAGING; X RAY CRYSTALLOGRAPHY;

EID: 0033788351     PISSN: 0959440X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-440X(00)00139-1     Document Type: Review

References (83)

1. Electron cryomicroscopy
2. High-resolution electron cryomicroscopy of macromolecular assemblies
3. Three-dimensional structure of membrane proteins determined by two-dimensional crystallization, electron cryomicroscopy, and image analysis
4. Review: Electron crystallography: Present excitement, a nod to the past, anticipating the future
5. Structure of the αβ tubulin dimer by electron crystallography
6. The structure of aquaporin-1 at 4.5 A resolution reveals short alpha-helices in the center of the monomer
7. Nicotinic acetylcholine receptor at 4.6 A resolution: Transverse tunnels in the channel wall
8. Structure of the calcium pump from sarcoplasmic reticulum at 8 A resolution
9. Determination of the fold of the core protein of hepatitis B virus by electron microscopy
10. Complementing crystallography: The role of cryo-electron microscopy in structural biology
11. Interaction of the poliovirus receptor with poliovirus
12. Three-dimensional structure of poliovirus receptor bound to poliovirus
13. The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution
14. The atomic structure of the bluetongue virus core
15. X-ray crystallographic structure of the Norwalk virus capsid
16. Structure of the reovirus core at 3.6 A resolution
17. Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask
18. A 9 A resolution X-ray crystallographic map of the large ribosomal subunit
19. Averaging data derived from images of helical structures with different symmetries
20. Adding the third dimension to virus life cycles: Three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs
21. Digitally collected cryo-electron micrographs for single particle reconstruction
22. Weighted back-projection methods
23. Structure of adenovirus complexed with its internalization receptor, α(v)β5 integrin
24. Three-dimensional structure of aleutian mink disease parvovirus: Implications for disease pathogenicity
25. Structure and assembly of large lipid-containing dsDNA viruses
26. Structural studies of two rhinovirus serotypes complexed with fragments of their cellular receptor
27. The first step: Activation of the Semliki Forest virus spike protein precursor causes a localized conformational change in the trimeric spike
28. Assembly of a tailed bacterial virus and its genome release studied in three dimensions
29. Topology of the components of the DNA packaging machinery in the phage phi29 prohead
30. The structure of maize streak virus: Are two heads better than one?
31. Cryo-electron-microscopy reconstruction of partially symmetric objects
32. The reconstruction of a three-dimensional structure from projections and its application to electron microscopy
33. Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution
34. At sixes and sevens: Characterization and the symmetry mismatch of the ClpAP chaperone-assisted protease
35. Eukaryotic type II chaperonin CCT interacts with actin through specific subunits
36. Three-dimensional structure of the human TFIID-IIA-IIB complex
37. 3D map of the plant photosystem II supercomplex obtained by cryoelactron microscopy and single particle analysis
38. Three-dimensional structure of ryanodine receptor isoform three in two conformational states as visualized by cryo-electron microscopy
39. Structure of the 13-fold symmetric portal protein of bacteriophage SPP1
40. Structure of alpha-latrotoxin oligomers reveals that divalent cation-dependent tetramers form membrane pores
41. Structure of the vault, a ubiquitous cellular component
42. Unveiling ribosomal structures: The final phases
43. The potential and limitations of neutrons, electrons, and X-rays for atomic resolution microscopy of unstained biological molecules
44. A symmetry mismatch at the site of RNA packaging in the polymerase complex of dsRNA bacteriophage φ6
45. New results using Laue diffraction and time-resolved crystallography
46. Freeze trapping of reaction intermediates
47. A computer-controlled spraying-freezing apparatus for millisecond time-resolution electron cryomicroscopy
48. A fast-freezing device with a retractable environmental chamber, suitable for kinetic cryo-electron microscopy studies
49. Maturation dynamics of a viral capsid: Visualization of transitional intermediate states
50. Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation
51. Electron tomography of molecules and cells
52. Cryo-electron tomography of Neurospora mitochondria
53. Golgi structure in three dimensions: Functional insights from the normal rat kidney cell
54. Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy
55. Novel structural features of bovine papillomavirus capsid revealed by a three-dimensional reconstruction to 9 A resolution
56. Cryo-electron microscopy reveals the functional organization of an enveloped virus, Semliki Forest virus
57. The Escherichia coli large ribosomal subunit at 7.5 Å resolution
58. Seeing the herpesvirus capsid at 8.5 Å
59. Solution structure of the E. coli 70S ribosome at 11.5 Å resolution
60. Methods for reconstructing density maps of 'single' particles from cryoelectron micrographs to subnanometer resolution
61. Haloarcular marismortui 50S subunit-complementarity of electron microscopy and X-ray crystallographic information
62. Scaling structure factor amplitudes in electron cryomicroscopy using X-ray solution scattering
63. Reduction of charging in protein electron cryomicroscopy
64. Undecagold cluster labeling of proteins at reactive cysteine residues
65. Ni-NTA-Gold clusters target his-tagged proteins
66. Direct three-dimensional localization and positive identification of RNA helices within the ribosome by means of genetic tagging and cryo-electron microscopy
67. Localization of the N terminus of hepatitis B virus capsid protein by peptide-based difference mapping from cryoelectron microscopy
68. Antibody-mediated neutralization of human rhinovirus 14 explored by means of cryoelectron microscopy and X-ray crystallography of virus-Fab complexes
69. The structure of the two amino-terminal domains of human intercellular adhesion molecule-1 suggests how it functions as a rhinovirus receptor
70. The molecular replacement method
71. JavaScope: A web-based TEM control interface
72. Web-based telemicroscopy
73. Perforated support foils with pre-defined hole size, shape and arrangement
74. Improving the positional accuracy of the goniometer on the Philips CM series TEM
75. Identification of spherical virus particles in digitized images of entire electron micrographs
76. PTOOL: A software package for the selection of particles from electron cryomicroscopy spot-scan images
77. Refinement of herpesvirus B-capsid structure on parallel supercomputers
78. Quantitative fitting of atomic models into observed densities derived by electron microscopy
79. Situs: A package for docking crystal structures into low-resolution maps from electron microscopy
80. The electron microscopy outreach program: A web based resource for research and education
81. The Biolmage database project: Organizing multidimensional biological images in an object-relational database
82. Three-dimensional reconstruction with contrast transfer function correction from energy-filtered cryoelectron micrographs: Procedure and application to the 70S Escherichia coli ribosome
83. Reconstruction principles of icosahedral virus structure determination using electron cryomicroscopy