Role of conserved histidine residues in D-aminoacylase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6

Bioscience, Biotechnology and Biochemistry

Volumn 64, Issue 1, 2000, Pages 1-8

  Wakayama, Mamoru ^a   Yada, Harutaka ^a   Kanda, Shun Ichi ^a   Hayashi, Shin Ichi ^a   Yatsuda, Yukinori ^a   Sakai, Kenji ^a   Moriguchi, Mitsuaki ^a  

^a OITA UNIVERSITY   (Japan)

Author keywords

Alcaligenes; D aminoacylase; Histidine residues; Zn enzyme

Indexed keywords

AMIDASE; AMINOACYLASE I; COBALT; DIETHYL PYROCARBONATE; HISTIDINE; ZINC;

ALCALIGENES; ARTICLE; CATALYSIS; CIRCULAR DICHROISM; DRUG EFFECT; ENZYMOLOGY; GENETICS; KINETICS; METABOLISM; PROTEIN CONFORMATION; SITE DIRECTED MUTAGENESIS; STRUCTURE ACTIVITY RELATION;

ALCALIGENES; AMIDOHYDROLASES; CATALYSIS; CIRCULAR DICHROISM; COBALT; DIETHYL PYROCARBONATE; HISTIDINE; KINETICS; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION; STRUCTURE-ACTIVITY RELATIONSHIP; ZINC;

EID: 0033632280     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.64.1     Document Type: Article

References (40)

1. Sugie, M. and Suzuki, H., Purification and properties of D-aminoacylase of Streptomyces olivaceus. Agric. Biol. Chem., 42, 107-113 (1978).
2. Sugie, M. and Suzuki, H., Optical resolution of DL-amino acids with D-aminoacylase of Streptomyces. Agric. Biol. Chem., 44, 1089-1095 (1980).
3. Kameda, Y., Toyoura, E., Yamazoe, H., Kimura, Y., and Yasuda, Y., Hydrolysis and metabolism by soil bacteria of benzoyl derivatives of D- and L-forms of some amino acids. Nature (London), 170, 888-889 (1952).
4. Kameda, Y., Hase, H., Kanamoto, S., and Kita, Y., Studies on acylase activity and microorganism. Purification and properties of D-aminoacylase (N-acyl-D-amino acid amidohydrolase) from AAA 6029 (Pseudomonas sp.). Chem. Pharm. Bull. (Tokyo), 26, 2698-2704 (1978).
5. Kubo, K., Ishikura, T., and Fukagawa, Y., Deacetylation of PS-5, a new β-lactam compound. II. Separation and purification of L- and D-amino acid acylases from Pseudomonas sp. 1158. J. Antibiot., 43, 550-555 (1980).
6. Moriguchi, M. and Ideta, K., Production of D-aminoacylase from Alcaligenes denitrificans subsp. xylosoxydans MI-4. Appl. Environ. Microbiol., 54, 2767-2770 (1988).
7. Sakai, S., Obata, T., Ideta, K., and Moriguchi, M., Purification and properties of D-aminoacylase from Alcaligenes denitrificans subsp. xylosoxydans MI-4. J. Ferment. Bioeng., 71, 79-82 (1991).
8. Tsai, Y. C., Tseng, C. P., Hsiao, K. M., and Chen, L. Y., Production and purification of D-aminoacylase from Alcaligenes denitrificans and taxonomic study of the strain. Appl. Environ. Microbiol., 54, 984-989 (1988).
9. Chibata, I., Tosa, T., Sato, T., Mori, T., and Matsuo, Y., Preparation and industrial application of immobilized aminoacylase, Proceedings of the IVth International Fermentation Symposium: Fermentation Technology Today. Society of Fermentation Technology, Kyoto, Japan, pp. 383-389 (1972).
10. Chibata, I., Tosa, T., Sato, T., and Mori, T., Production of L-amino acids by aminoacylase adsorbed on DEAE-Sephadex. Methods Enzymol., 44, 746-759 (1976).
11. Tsai, Y. C., Lin, C. S., Tseng, T. H., Lee, H., and Wang, Y. J., Production and immobilization of D-aminoacylase of Alcaligenes faecalis DA1 for optical resolution of N-acyl-DL-amino acids. Enzyme Microb. Technol., 14, 384-389 (1992).
12. Moriguchi, M., Sakai, K., Miyamoto, Y., and Wakayama, M., Production, purification, and characterization of D-aminoacylase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6. Biosci. Biotechnol. Biochem., 57, 1149-1152 (1993).
13. Sakai, K., Imamura, K., Goto, M., Hirashiki, I., and Moriguchi, M., Occurrence of novel enzyme, N-acetyl-D-glutamate deacylase and N-acetyl-D-aspartate deacylase, in Alcaligenes xylosoxydans subsp. xylosoxydans A-6. Agric. Biol. Chem, 54, 841-844 (1990).
14. Sakai, K., Imamura, K., Sonoda, Y., Kido, H., and Moriguchi, M., Purification and characterization of N-acyl-D-glutamate deacylase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6. FEBS Lett., 289, 44-46 (1991).
15. Moriguchi, M., Sakai, K., Katsuno, Y., Maki, T., and Wakayama, M., Purification and characterization of novel N-acyl-D-aspartate amidohydrolase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6. Biosci. Biotechnol. Biochem., 57, 1145-1148 (1993).
16. Wakayama, M., Katsuno, Y., Hayashi, S., Miyamoto, Y., Sakai, K., and Moriguchi, M., Cloning and sequencing of a gene encoding D-aminoacylase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6 and expression of the gene in Escherichia coli. Biosci. Biotechnol. Biochem., 59, 2115-2119 (1995).
17. Wakayama, M., Watanabe, E., Takenaka, Y., Miyamoto, Y., Tau, Y., Sakai, K., and Moriguchi, M., Cloning, expression, and nucleotide sequence of the gene of N-acyl-D-aspartate amidohydrolase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6. J. Ferment. Bioeng., 80, 311-317 (1995).
18. Wakayama, M., Ashika, T., Miyamoto, Y., Yoshikawa, T., Sonoda, Y., Sakai, K., and Moriguchi, M., Primary structure of N-acyl-D-glutamate amidohydrolase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6. J. Biochem., 118, 204-209 (1995).
19. Mitta, M., Ohnogi, H., Yamamoto, A., Kato, I., Sakiyama, F., and Tsunasawa, S., The primary structure of porcine aminoacylase 1 deduced from cDNA sequence. J. Biochem., 112, 737-742 (1992).
20. Sakanyan, V., Desmarez, L., Legrain, C., Charlier, D., Mett, I., Kochikyan, A., Savchenko, A., Boyen, A., Falmagne, P., Pierard, A., and Glansdorff, N., Gene cloning, sequence analysis, purification, and characterization of a thermostable aminoacylase from Bacillus stearothermophilus. Appl. Environ. Microbiol., 59, 3878-3888 (1993).
21. Kordel, W. and Schneider, F., Identification of essential histidine residues of aminoacylase by photooxidation and by reaction with diethylpyrocarbonate. Z. Naturforsch., 32c, 337-341 (1977).
22. Wang, Z. X., Wu, H. B., Wang, X. C., Zhou, H. M., and Tsou, C. L., Kinetics of the course of inactivation of aminoacylase by 1, 10-phenanthroline. Biochem. J., 281, 285-290 (1992).
23. Wakayama, M., Tsutsumi, T., Yada, H., Sakai, K., and Moriguchi, M., Chemical modification of histidine residue of N-acyl-D-glutamate amidohydrolase from Pseudomonas sp. 5f-1. Biosci. Biotechnol. Biochem., 60, 650-653 (1996).
24. Wakayama, M., Hayashi, S., Yatsuda, Y., Katsuno, Y., Sakai, K., and Moriguchi, M., Overproduction of D-aminoacylase from Alcaligenes xylosoxydans subsp. xylosoxydans A-6 in Escherichia coli and its purification. Protein Expression and Purification, 7, 395-399 (1996).
25. Yang, Y. B., Hsiao, K. M., Li, H., Yano, H., Tsugita, A., and Tsai, Y. C., Characterization of D-aminoacylase from Alcaligenes denitrificans DA181. Biosci. Biotechnol. Biochem., 56, 1392-1395 (1992).
26. Kannan, K. K., Notstrand, B., Fridborg, K., Lovgren, S., Ohlsson, A., and Petef, M., Crystal structure of human erythrocyte carbonic anhydrase B. Three-dimensional structure at nominal 2.2-A resolution. Proc. Nat. Acad. Sci. USA, 72, 51-55 (1975).
27. Sutton, B. J., Artymiuk, P. J., Cordero-Borboa, A. E., Little, C., Phillips, D. C., and Waley, S. G., An X-ray-crystallographic study of β-lactamase II from Bacillus cereus at 0.35 nm resolution. Biochem. J., 248, 181-188 (1987).
28. Brown, D. C. and Collins, K. D., Dihydroorotase from Escherichia coli: substitution of Co(II) for the active site Zn(II). J. Biol. Chem., 266, 1597-1604 (1991).
29. Tang, Z. Y., Yu, J. Y., Zhou, Q., He, B. A., Wang, Z. F., and Zhou, H. M., Secondary structure of holo-aminoacylase and apo-aminoacylase from prediction, circular-dichroism, and FT-Raman spectroscopy. J. Biochem., 118, 706-709 (1995).
30. Weiss, H. M., Palm, G. J., and Rohm, K. H., Thermostable aminoacylase from Bacillus stearothermophilus: Significance of the metal center for catalysis and protein stability. Biological chemistry hoppe-seyler, 376, 643-649 (1995).
31. Wakayama, M., Miura, Y., Oshima, K., Sakai, K., and Moriguchi, M., Metal-characterization of N-acyl-D-glutamate amidohydrolase from Pseudomonas sp. strain 5f-1. Biosci. Biotechnol. Biochem., 59, 1489-1492 (1995).
32. Pittelkow, S., Lindner, H., and Rohm, K. H., Human and porcine aminoacylase I overproduced in a Baculovirus expression vector system: Evidence for structural and functional identity with enzymes isolated from kidney. Protein Expression and Purification, 12, 269-276 (1998).
33. Cho, H. Y., Tanizawa, K., Tanaka, H., and Soda, K., Thermostable aminoacylase from Bacillus thermoglucosidius: Purification and characterization. Agric. Biol. Chem., 51, 2793-2800 (1987).
34. Kordel, W. and Schneider, F., Chemical investigations on pig kidney aminoacylase. Biochim. Biophys. Acta, 445, 446-457 (1976).
35. Holm, L. and Sander, C., An evolutionary treasure: Unification of a broad set of amidohydrolases related to urease. PROTEIN: Structure, Function, and Genetics, 28, 72-82 (1997).
36. Sadowsky, M. J., Tong, Z., Souza, M. D., and Wackett, L. P., AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolozing enzymes. J. Bacteriol., 180, 152-158 (1998).
37. Kurisu, G., Kinoshita, T., Sugimoto, A., Nagara, A., Kai, Y., Kasai, N., and Harada, S., Structure of the zinc endoprotease from Streptomyces caespitosus. J. Biochem., 121, 304-308 (1997).
38. Jabri, E., Carr, M. B., Hausinger, R. P., and Karplus, P. A., The crystal structure of urease from Klebsiella aerogenes. Science, 268, 998-1004 (1995).
39. Heese, D. and Rohm, K. H., Reactivities of sulfhydryl groups in native and metal-free aminoacylase I. Bio. Chem. Hoppe-Seyler, 370, 607-612 (1989).
40. Teranishi, Y., Tokuyama, S., and Tahara, Y., Purification and characterization of D-aminoacylase from Sebekia benihana. p. 334. In Proceedings of the Annual Meeting of Japan Society for Bioscience, Biotechnology, and Agrochemistry, Japan (Nagoya) (1998).