Amino acid sequence of an unique ribonuclease with a C-terminus rich in O-glycosylated serine and threonine from culture medium of Lentinus edodes

Bioscience, Biotechnology and Biochemistry

Volumn 64, Issue 1, 2000, Pages 44-51

  Inokuchi, Norio ^a   Kobayashi, Hiroko ^a   Hara, Jyun ^a   Itagaki, Tadashi ^a   Koyama, Takashi ^a   Iwama, Masanori ^b   Ohgi, Kazuko ^b   Irie, Masachika ^b  

^a NIHON UNIVERSITY   (Japan)

^b HOSHI UNIVERSITY   (Japan)

Author keywords

Base non specific ribonuclease; Lentinus edodes; Peptide rich in serine and threonine; Primary structure; Ribonuclease

Indexed keywords

RIBONUCLEASE; RIBONUCLEASE RH; SERINE; THREONINE;

AGARICALES; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CULTURE MEDIUM; ENZYMOLOGY; GLYCOSYLATION; MOLECULAR GENETICS;

AGARICALES; AMINO ACID SEQUENCE; CULTURE MEDIA; ENDORIBONUCLEASES; GLYCOSYLATION; MOLECULAR SEQUENCE DATA; RIBONUCLEASES; SERINE; THREONINE;

EID: 0033628439     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.64.44     Document Type: Article

References (26)

1. Irie, M., RNase T1/T2 family RNases. In "Ribonuclease, structure and functions", eds. D'Alessio, G. and Riordan, J. F., Academic Press, New York, pp. 101-130 (1997).
2. Irie, M., Structure-function relationships of acid ribonucleases, lysosomal, vacuolar, and periplasmic enzymes. Pharmacol. Ther., 81, 77-89 (1999).
3. Kobayashi, H., Imanaka, M., Inokuchi, N., Koyama, T., and Irie, M., Characterization of ribonucleases from culture medium of Lentinus edodes. Biosci. Biotechnol. Biochem., 62, 1604-1608 (1998).
4. Kobayashi, H., Inokuchi, N., Koyama, T., Watanabe, H., Iwama, M., Ohgi, K., and Irie, M., Primary structure of a base non-specific and adenylic acid preferential ribonuclease from the fruit body of Lentinus edodes. Biosci. Biotechnol. Biochem., 56, 2003-2010 (1992).
5. Bidlingmeyer, B. A., Cohen, S. A., and Tarvin, T., Rapid analysis of amino acids using pre-column derivatization. J. Chromato., 336, 93 (1989).
6. Spackman, D. A., Stein, W. H., and Moore, S., Automatic recording apparatus for use in the chromatography of amino acids. Anal. Chem., 30, 1190-1206 (1956).
7. Pajot, P., Fluorescence of protein in 6 M guanidine hydrochloride. Eur. J. Biochem., 63, 263-269 (1976).
8. Hewick, R. W., Hunkapiller, M. W., Hood, L. E., and Dreyer, W. J., A gas-liquid solid phase peptide protein sequenator. J. Biol. Chem., 256, 7990-7997 (1991).
9. Crestfield, A. M., Moore, S., and Stein, W. H., Preparation and enzyme hydrolysis of reduced and S-carboxymethylated protein. J. Biol. Chem., 238, 622-627 (1963).
10. Downs, F. and Pigman, W., Preparation of glycopeptides from bovine submaxillary mucin by chemical degradation. Biochemistry, 8, 1760-1766 (1969).
11. Tanaka, K., Bertolini, M., and Pigman, W., Serine and threonine glycosidic linkages in bovine submaxillary mucin. Biochem. Biophys. Res. Commun., 16, 404-409 (1964).
12. Horiuchi, H., Yanai, K., Takagi, M., Yano, K., Wakabayashi, E., Sanda, A., Mine, S., Ohgi, K., and Irie, M., Primary structure of a base non-specific ribonuclease from Rhizopus niveus. J. Biochem. (Tokyo), 103, 408-418 (1988).
13. Watanabe, H., Hamid Fauzi, Iwama, M., Ohgi, K., and Irie, M., Base non-specific acid ribonuclease from Irpex lacteus. Primary structure, phylogenetic relationship in RNase T2 family enzyme. Biosci. Biotechnol. Biochem., 59, 2097-2103 (1995).
14. Kurihara, H., Nonaka, T., Mitsui, Y., Ohgi, K., Irie, M., and Nakamura, K. T., The crystal structure of ribonuclease Rh from Rhizopus niveus at 2.0 Å resolution. J. Mol. Biol., 255, 310-320 (1996).
15. Irie, M., Nitta, R., Ohgi, K., Niwata, Y., Watanabe, H., Iwama, M., Beintema, J. J., Sanda, A., and Takizawa, Y., Primary structure of a non-secretory ribonuclease from bovine kidney. J. Biochem. (Tokyo), 104, 289-296 (1988).
16. Beintema, J. J., Hofsteenge, J., Iwama, M., Morita, T., Ohgi, K., Irie, M., Sugiyama, R. H., Schieven, G. L., Dekker, C. A., and Glitz, D. G., Amino acid sequence of the non-secretory ribonuclease of human urine. Biochemistry, 27, 4530-4538 (1988).
17. Watanabe, H., Kato, H., Ishii, M., Komoda, Y., Sanda, A., Takizawa, Y., Ohgi, K., and Irie, M., Primary structure of a ribonuclease from bovine brain. J. Biochem. (Tokyo), 104, 939-945 (1988).
18. Svensson, B., Larsen, K., Svendsen, I., and Boel, E., The complete amino acid sequence of the glycoprotein, glucoamylase G1, from Aspergillus niger. Carlsberg Res. Commun., 48, 529-544 (1983).
19. Gunnarsson, A., Svennson, B., Nilsson, B., and Svensson, G., Structural studies on the O-glycosidically linked carbohydrate chains of glucoamylase from Aspergillus niger. Eur. J. Biochem., 145, 463-467 (1983).
20. Coutinho, P. M. and Reilly, P. J., Structure function relationships in the catalytic and starch binding domain of glucoamylases. Protein Eng., 7, 393-400 (1994).
21. Kuranda, M. and Robbins, P. W., Chitinase is required for cell separation during growth of Saccharomyces cerevisiae. J. Biol. Chem., 266, 19758-19767 (1991).
22. McCreath, K. J., Specht, C. A., and Robbins, P. W., Molecular cloning and characterization of chitinase genes from Candida albicans. Proc. Natl. Acad. Sci. U.S.A., 92, 2544-2548 (1995).
23. MacCreath, K. J., Specht, C. A., Liu, Y., and Robbins, P. W., Molecular cloning of a third chitinase gene (CHT1) from Candida albicans. Yeast, 12, 501-504 (1996).
24. Yanai, K., Takaya, N., Kojima, N., Horiuchi, H., Ohta, A., and Takagi, M., Purification of two chitinases from Rhizopus oligosporus and isolation and sequencing of the encording genes. J. Bacteriol., 174, 7498-7506 (1992).
25. Libby, C. B., Cornett, C. A. G., Reilly, P. J., and Ford, C., Effect of amino acid deletion in the O-glycosylated region of Aspergillus awamori glucoamylase. Protein Eng., 7, 1109-1114 (1994).
26. Goto, M., Tsukamoto, M., Kwon, I., Ekino, K. and Furukawa, K., Functional analysis of O-linked oligosaccharides in threonine/serine rich region of Aspergillus glucoamylases by expression in mannosyltransferase disruptants of yeast. Eur. J. Biochem., 260, 596-602 (1999).