Evaluation of a cDNA scanning method concerning the fidelity and efficiency of cDNA selection using the YAC CIC3B1-S region of arabidopsis thaliana chromosome 5

DNA Research

Volumn 6, Issue 4, 1999, Pages 247-253

  Motohashi, Reiko ^a,b   Ito, Taknya ^a   Seki, Motoaki ^a   Ichimura, Kazuya ^a   Yamaguchi Shinozaki, Kazuko ^b   Siunozaki, Kazuo ^a  

^a RIKEN TSUKUBA INSTITUTE   (Japan)

^b JAPAN INTERNATIONAL RESEARCH CENTER FOR AGRICULTURAL SCIENCES   (Japan)

Author keywords

Arabidopsis thaliana; cDNA scanning method; YAC

Indexed keywords

COMPLEMENTARY DNA;

ARABIDOPSIS; ARTICLE; CHROMOSOME MAP; DNA SEQUENCE; EXPRESSED SEQUENCE TAG; GENETICS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; REPRODUCIBILITY; YEAST ARTIFICIAL CHROMOSOME;

ARABIDOPSIS; BASE SEQUENCE; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, YEAST; DNA, COMPLEMENTARY; EXPRESSED SEQUENCE TAGS; MOLECULAR SEQUENCE DATA; REPRODUCIBILITY OF RESULTS; SEQUENCE ANALYSIS, DNA;

EID: 0033620984     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/6.4.247     Document Type: Article

References (13)

1. Johnston, M. 1996, The complete code for a eukaryotic cell, Genome sequencing, Curr. Biol., 6, 500-503.
2. Blaxter, M. 1998, Caenorhabditis elegans is a nematode, Science, 282 (5396), 2041-2046.
3. Kotani, H., Sato, S., Fukami, M. et al. 1997b, A fine physical map of Arabidopsis thaliana chromosome 5: construction of a sequence-ready conting map, DNA Res., 4, 371-378.
4. Bevan, M., Ecker, J., Theologis, S. et al. 1997, Objective: the complete sequence of a plant genome, Plant Cell, 9, 476-478.
5. Newman, T., DeBruiji, F. J., Green, P. et al. 1994, Genes galore: a summary of methods for accessing results from large-scale partial sequencing of anonymous Arabidopsis cDNA clones, Plant Physiol, 106, 1241-1255.
6. Höfte, H., Desprez, T., Amselem, J. et al. 1993, An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arbidopsis thaliana, Plant J., 4, 1051-1061.
7. Creusot, F., Fouilloux, E., Dron, M. et al. 1995a, The CIC library: a large insert YAC library for genome mapping in Arabidopsis thaliana, Plant J., 8, 768-770.
8. Ohio, S. D., Creelman, R., Mullet, J., and Wing, R. A. 1995, Construction and characterization of a bacterial artificial chromosome library of Arabidopsis thaliana, Weeds World, 2(I), 17-20.
9. Liu, Y.-G., Mitsukawa, N., Vazquez-Tello, A., and Whittier, R. F. 1995, Generation of a high-quality P1 library of Arabidopsis suitable for chromosome walking, Plant J., 7, 351-358.
10. Hardtke, C. S. and Berleth, T. 1998, The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development, EMBO J., 17, 1405-1411.
11. Moussian, B., Schoof, H., Haecker, A., Jurgens, G., and Laux, T. 1998, Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis, EMBO J., 17, 1799-1809.
12. Finkelstein, R. R., Wang, M. L., Lynch, T. J., Rao, S., and Goodman, H. M. 1998, The Arabidopsis abscisic acid response locus ABI4 encodes an APETALA 2 domain protein, Plant Cell, 10, 1043-1054.
13. Hayashida, N., Sumi, Y., Wada, T., Handa, H., and Shinozaki, K. 1995, Construction of a cDNA library for a specific region of a chromosome using a novel cDNA selection method utilizing latex particles, Gene, 165, 155-161.