-
2
-
-
0032418732
-
Stimulation of bacteriophage T4 middle transcription by the T4 proteins MotA and AsiA occurs at two distinct steps in the transcription cycle
-
Adelman K., Brody E. N., Buckle M. Stimulation of bacteriophage T4 middle transcription by the T4 proteins MotA and AsiA occurs at two distinct steps in the transcription cycle. Proc. Natl Acad. Sci. USA. 95:1998;15247-15252.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 15247-15252
-
-
Adelman, K.1
Brody, E.N.2
Buckle, M.3
-
3
-
-
0001970325
-
Regulation of transcription of prereplicative genes
-
C. K. Mathews, E. Kutter, G. Mosig, & P. B. Berget. Washington: American Society for Microbiology
-
Brody E., Rabussay D., Hall D. H. Regulation of transcription of prereplicative genes. Mathews C. K., Kutter E., Mosig G., Berget P. B. Bacteriophage T4. 1983;174-183 American Society for Microbiology, Washington.
-
(1983)
Bacteriophage T4
, pp. 174-183
-
-
Brody, E.1
Rabussay, D.2
Hall, D.H.3
-
4
-
-
0028061282
-
Promoter structure, promoter recognition, and transcription activation in prokaryotes
-
Busby S., Ebright R. Promoter structure, promoter recognition, and transcription activation in prokaryotes. Cell. 79:1994;743-746.
-
(1994)
Cell
, vol.79
, pp. 743-746
-
-
Busby, S.1
Ebright, R.2
-
5
-
-
0023955176
-
Gel retardation at low pH resolves trp repressor-DNA complexes for quantitative study
-
Carey J. Gel retardation at low pH resolves trp repressor-DNA complexes for quantitative study. Proc. Natl Acad. Sci. USA. 85:1988;975-979.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 975-979
-
-
Carey, J.1
-
6
-
-
0026346185
-
Gel retardation
-
Carey J. Gel retardation. Methods Enzymol. 208:1991;103-117.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 103-117
-
-
Carey, J.1
-
7
-
-
0001168542
-
Restriction and modification
-
J. D. Karam, J. W. Drake, G. Mosig, D. H. Hall, F. A. Eiserling, L. W. Black, E. K. Spicer, E. Kutter, K. Carlson, & E. S. Miller. Washington: American Society for Microbiology
-
Carlson K., Raleigh E. A., Hattman S. Restriction and modification. Karam J. D., Drake J. W., Mosig G., Hall D. H., Eiserling F. A., Black L. W., Spicer E. K., Kutter E., Carlson K., Miller E. S. Molecular Biology of Bacteriophage T4. 1994;369-381 American Society for Microbiology, Washington.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 369-381
-
-
Carlson, K.1
Raleigh, E.A.2
Hattman, S.3
-
8
-
-
0032492719
-
The MotA transcriptional activator of bacteriophage T4 binds to its specific DNA site as a monomer
-
Cicero M. P., Alexander K. A., Kreuzer K. N. The MotA transcriptional activator of bacteriophage T4 binds to its specific DNA site as a monomer. Biochemistry. 37:1998;4977-4984.
-
(1998)
Biochemistry
, vol.37
, pp. 4977-4984
-
-
Cicero, M.P.1
Alexander, K.A.2
Kreuzer, K.N.3
-
11
-
-
0028000270
-
The DNA-binding domain of the MotA transcription factor from bacteriophage T4 shows structural similarity to the TATA-binding protein
-
Finnin M. S., Hoffman D. W., White S. W. The DNA-binding domain of the MotA transcription factor from bacteriophage T4 shows structural similarity to the TATA-binding protein. Proc. Natl Acad. Sci. USA. 91:1994;10972-10976.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 10972-10976
-
-
Finnin, M.S.1
Hoffman, D.W.2
White, S.W.3
-
12
-
-
0024240952
-
Analysis of the recognition mechanism involved in the EcoRV catalyzed cleavage of DNA using modified oligodeoxynucleotides
-
Fliess A., Wolfes H., Seela F., Pingoud A. Analysis of the recognition mechanism involved in the EcoRV catalyzed cleavage of DNA using modified oligodeoxynucleotides. Nucl. Acids Res. 16:1988;11781-11793.
-
(1988)
Nucl. Acids Res.
, vol.16
, pp. 11781-11793
-
-
Fliess, A.1
Wolfes, H.2
Seela, F.3
Pingoud, A.4
-
13
-
-
0029910511
-
An N-terminal mutation in the bacteriophage T4 motA gene yields a protein that binds DNA but is defective for activation of transcription
-
Gerber J. S., Hinton D. M. An N-terminal mutation in the bacteriophage T4 motA gene yields a protein that binds DNA but is defective for activation of transcription. J. Bacteriol. 178:1996;6133-6139.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6133-6139
-
-
Gerber, J.S.1
Hinton, D.M.2
-
14
-
-
0024292146
-
Transcriptional activation of bacteriophage T4 middle promoters by the motA protein
-
Guild N., Gayle M., Sweeney T., Hollingsworth T., Modeer T., Gold L. Transcriptional activation of bacteriophage T4 middle promoters by the motA protein. J. Mol. Biol. 199:1988;241-258.
-
(1988)
J. Mol. Biol.
, vol.199
, pp. 241-258
-
-
Guild, N.1
Gayle, M.2
Sweeney, T.3
Hollingsworth, T.4
Modeer, T.5
Gold, L.6
-
15
-
-
1842271665
-
A dimer of AraC protein contacts three adjacent major groove regions at the Ara I DNA site
-
Hendrickson W., Schleif R. A dimer of AraC protein contacts three adjacent major groove regions at the Ara I DNA site. Proc. Natl Acad. Sci. USA. 82:1985;3129-3133.
-
(1985)
Proc. Natl Acad. Sci. USA
, vol.82
, pp. 3129-3133
-
-
Hendrickson, W.1
Schleif, R.2
-
16
-
-
0025990737
-
Transcription from a bacteriophage T4 middle promoter using T4 motA protein and phage-modified RNA polymerase
-
Hinton D. M. Transcription from a bacteriophage T4 middle promoter using T4 motA protein and phage-modified RNA polymerase. J. Biol. Chem. 266:1991;18034-18044.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 18034-18044
-
-
Hinton, D.M.1
-
18
-
-
0029834729
-
The bacteriophage T4 middle transcription system: T4-modified RNA polymerase, AsiA (Sigma-70 binding protein), and the transcriptional activator MotA
-
Hinton D. M., March-Amegadzie R., Gerber J., Sharma M. The bacteriophage T4 middle transcription system: T4-modified RNA polymerase, AsiA (Sigma-70 binding protein), and the transcriptional activator MotA. Methods Enzymol. 274:1996b;43-57.
-
(1996)
Methods Enzymol.
, vol.274
, pp. 43-57
-
-
Hinton, D.M.1
March-Amegadzie, R.2
Gerber, J.3
Sharma, M.4
-
19
-
-
0032489504
-
Protein-protein contacts that activate and repress transcription
-
Hochschild A., Dove S. L. Protein-protein contacts that activate and repress transcription. Cell. 92:1998;597-600.
-
(1998)
Cell
, vol.92
, pp. 597-600
-
-
Hochschild, A.1
Dove, S.L.2
-
20
-
-
0027483012
-
Co- crystal structure of TBP recognizing the minor groove of a TATA element
-
Kim J. L., Nikolov D. B., Burley S. K. Co- crystal structure of TBP recognizing the minor groove of a TATA element. Nature. 365:1993;520-527.
-
(1993)
Nature
, vol.365
, pp. 520-527
-
-
Kim, J.L.1
Nikolov, D.B.2
Burley, S.K.3
-
21
-
-
0027504913
-
Crystal structure of a yeast TBP/TATA-box complex
-
Kim Y., Geiger J. H., Hahn S., Sigler P. B. Crystal structure of a yeast TBP/TATA-box complex. Nature. 365:1993;512-520.
-
(1993)
Nature
, vol.365
, pp. 512-520
-
-
Kim, Y.1
Geiger, J.H.2
Hahn, S.3
Sigler, P.B.4
-
22
-
-
0026337044
-
Interaction of TFIID in the minor groove of the TATA element
-
Lee D. K., Horikoshi M., Roeder R. G. Interaction of TFIID in the minor groove of the TATA element. Cell. 67:1991;1241-1250.
-
(1991)
Cell
, vol.67
, pp. 1241-1250
-
-
Lee, D.K.1
Horikoshi, M.2
Roeder, R.G.3
-
23
-
-
0028914875
-
uvsX: Analysis of regions important for binding of the T4 transcriptional activator MotA and for activation of transcription
-
uvsX: analysis of regions important for binding of the T4 transcriptional activator MotA and for activation of transcription. Mol. Microbiol. 15:1995;649-660.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 649-660
-
-
March-Amegadzie, R.1
Hinton, D.M.2
-
24
-
-
0033593502
-
The bacteriophage T4 transcriptional activator MotA accepts various base pair changes within its binding sequence
-
Marshall P., Sharma M., Hinton D. M. The bacteriophage T4 transcriptional activator MotA accepts various base pair changes within its binding sequence. J. Mol. Biol. 285:1999;931-944.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 931-944
-
-
Marshall, P.1
Sharma, M.2
Hinton, D.M.3
-
25
-
-
0027314423
-
Tests of a model for promoter recognition by T7 RNA polymerase: Thymine methyl group contacts
-
Maslak M., Jaworski M. D., Martin C. T. Tests of a model for promoter recognition by T7 RNA polymerase: thymine methyl group contacts. Biochemistry, 32:1993;4270-4274.
-
(1993)
Biochemistry
, vol.32
, pp. 4270-4274
-
-
Maslak, M.1
Jaworski, M.D.2
Martin, C.T.3
-
26
-
-
0016341886
-
Mutant of bacteriophage T4D affecting expression of many early genes
-
Mattson T., Richardson J., Goodin D. Mutant of bacteriophage T4D affecting expression of many early genes. Nature. 250:1974;48-50.
-
(1974)
Nature
, vol.250
, pp. 48-50
-
-
Mattson, T.1
Richardson, J.2
Goodin, D.3
-
27
-
-
0027463770
-
Location of close contacts between Escherichia coli RNA polymerase and guanine residues either with or without -35 region sequences
-
Minchin S., Busby S. Location of close contacts between Escherichia coli RNA polymerase and guanine residues either with or without -35 region sequences. Biochem J. 289:1993;771-775.
-
(1993)
Biochem J.
, vol.289
, pp. 771-775
-
-
Minchin, S.1
Busby, S.2
-
28
-
-
0024658026
-
A new early gene upstream of the middle gene 31 in bacteriophage T4: Cloning and expression
-
Nivinskas R. G., Raudonikiene A., Guild N. A new early gene upstream of the middle gene 31 in bacteriophage T4: cloning and expression. Mol. Biol. (Moscow). 23:1989;739-749.
-
(1989)
Mol. Biol. (Moscow)
, vol.23
, pp. 739-749
-
-
Nivinskas, R.G.1
Raudonikiene, A.2
Guild, N.3
-
29
-
-
0028925747
-
Bacteriophage T4 MotA and AsiA proteins suffice to direct Escherichia coli RNA polymerase to initiate transcription at T4 middle promoters
-
Ouhammouch M., Adelman K., Harvey S. R., Orsini G., Brody E. N. Bacteriophage T4 MotA and AsiA proteins suffice to direct Escherichia coli RNA polymerase to initiate transcription at T4 middle promoters. Proc. Natl Acad. Sci. USA. 92:1995;1415-1419.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 1415-1419
-
-
Ouhammouch, M.1
Adelman, K.2
Harvey, S.R.3
Orsini, G.4
Brody, E.N.5
-
30
-
-
0027196294
-
Identification of specific contacts in T3 RNA polymerase-promoter interactions: Kinetic analysis using small synthetic promoters
-
Schick C., Martin C. T. Identification of specific contacts in T3 RNA polymerase-promoter interactions: kinetic analysis using small synthetic promoters. Biochem. 32:1993;4275-4280.
-
(1993)
Biochem.
, vol.32
, pp. 4275-4280
-
-
Schick, C.1
Martin, C.T.2
-
31
-
-
0026725773
-
Purified motA protein binds the -30 region of a bacteriophage T4 middle-mode promoter and activates transcription in vitro
-
Schmidt R. P., Kreuzer K. N. Purified motA protein binds the -30 region of a bacteriophage T4 middle-mode promoter and activates transcription in vitro. J. Biol. Chem. 267:1992;11399-11407.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 11399-11407
-
-
Schmidt, R.P.1
Kreuzer, K.N.2
-
32
-
-
0032568924
-
Expressed protein ligation, a novel method for studying protein-protein interactions in transcription
-
Severinov K., Muir T. M. Expressed protein ligation, a novel method for studying protein-protein interactions in transcription. J. Biol. Chem. 273:1998;16205-16209.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 16205-16209
-
-
Severinov, K.1
Muir, T.M.2
-
33
-
-
0030589041
-
70 subunit
-
70 subunit. J. Mol. Biol. 263:1996;637-647.
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 637-647
-
-
Severinova, E.1
Severinov, K.2
Fenyö, D.3
Marr, M.4
Brody, E.N.5
Roberts, J.W.6
Chait, B.T.7
Darst, S.8
-
34
-
-
0010291050
-
Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7
-
Siebenlist U., Gilbert W. Contacts between Escherichia coli RNA polymerase and an early promoter of phage T7. Proc. Natl Acad. Sci. USA. 77:1980;122-126.
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 122-126
-
-
Siebenlist, U.1
Gilbert, W.2
-
35
-
-
0018867360
-
E. coli RNA polymerase interacts homologously with two different promoters
-
Siebenlist U., Simpson R. B., Gilbert W. E. coli RNA polymerase interacts homologously with two different promoters. Cell. 20:1980;269-281.
-
(1980)
Cell
, vol.20
, pp. 269-281
-
-
Siebenlist, U.1
Simpson, R.B.2
Gilbert, W.3
-
36
-
-
0345443002
-
Evidence for close contacts between RNA polymerase and promoter DNA
-
R. Rodriguez, & M. Chamberlin. New York: Praeger ScientificPraeger Publishers
-
Simpson R. B. Evidence for close contacts between RNA polymerase and promoter DNA. Rodriguez R., Chamberlin M. Promoters: Structure and Function. 1982;164-180 Praeger ScientificPraeger Publishers, New York.
-
(1982)
Promoters: Structure and Function
, pp. 164-180
-
-
Simpson, R.B.1
-
37
-
-
0026325168
-
TFIID binds in the minor groove of the TATA box
-
Starr D. B., Hawley D. K. TFIID binds in the minor groove of the TATA box. Cell. 67:1991;1231-1240.
-
(1991)
Cell
, vol.67
, pp. 1231-1240
-
-
Starr, D.B.1
Hawley, D.K.2
-
38
-
-
0001889641
-
A salt-promoted inhibitor of RNA polymerase isolated form T4 phage-infected E. coli
-
Chamberlin Losick. Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Stevens A. A salt-promoted inhibitor of RNA polymerase isolated form T4 phage-infected E. coli. Losick Chamberlin. RNA Polymerase. 1976;617-627 Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1976)
RNA Polymerase
, pp. 617-627
-
-
Stevens, A.1
-
39
-
-
0016752445
-
Characterization of an inhibitor causing potassium chloride sensitivity of an RNA polymerase from T4 phage-infected Escherichia coli
-
Stevens A., Rhoton J. C. Characterization of an inhibitor causing potassium chloride sensitivity of an RNA polymerase from T4 phage-infected Escherichia coli. Biochemistry. 14:1975;5074-5079.
-
(1975)
Biochemistry
, vol.14
, pp. 5074-5079
-
-
Stevens, A.1
Rhoton, J.C.2
-
40
-
-
0002045328
-
Regulation of middle-mode transcription
-
J. D. Karam, J. W. Drake, G. Mosig, D. H. Hall, F. A. Eiserling, L. W. Black, E. K. Spicer, E. Kutter, K. Carlson, & E. S. Miller. Washington: American Society for Microbiology
-
Stitt B., Hinton D. Regulation of middle-mode transcription. Karam J. D., Drake J. W., Mosig G., Hall D. H., Eiserling F. A., Black L. W., Spicer E. K., Kutter E., Carlson K., Miller E. S. Molecular Biology of Bacteriophage T4. 1994;142-160 American Society for Microbiology, Washington.
-
(1994)
Molecular Biology of Bacteriophage T4
, pp. 142-160
-
-
Stitt, B.1
Hinton, D.2
-
41
-
-
0032502998
-
The arginine repressor of Escherichia coli K-12 makes direct contacts to minor and major groove determinants of the operators
-
Wang H., Glansdorff N., Charlier D. The arginine repressor of Escherichia coli K-12 makes direct contacts to minor and major groove determinants of the operators. J. Mol. Biol. 277:1998;805-824.
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 805-824
-
-
Wang, H.1
Glansdorff, N.2
Charlier, D.3
-
42
-
-
0025880536
-
Enhancement of transcription termination factor rho activity with potassium glutamate
-
Zou L., Richardson J. P. Enhancement of transcription termination factor rho activity with potassium glutamate. J. Biol. Chem. 266:1991;10201-10209.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 10201-10209
-
-
Zou, L.1
Richardson, J.P.2
|