Analysis of cDNAs expressed during first cell division of petunia petal protoplast cultures using expressed sequence tags

Molecules and Cells

Volumn 9, Issue 3, 1999, Pages 258-264

  Yu, Hee Ju ^a,b   Moon, Myung Soon ^a   Lee, Hyeon Se ^a   Mun, Jeong Hwan ^a   Kwon, Young Myung ^a   Kim, Sang Gu ^a  

^a Seoul National University   (South Korea)

^b National Institute of Animal Science   (South Korea)

Author keywords

Cell Division; Expressed Sequence Tags; Petal Protoplast; Petunia

Indexed keywords

COMPLEMENTARY DNA; PLANT DNA;

ANGIOSPERM; ARTICLE; CELL DIVISION; CYTOLOGY; EXPRESSED SEQUENCE TAG; GENETICS; MOLECULAR CLONING; PROTOPLAST;

CELL DIVISION; CLONING, MOLECULAR; DNA, COMPLEMENTARY; DNA, PLANT; EXPRESSED SEQUENCE TAGS; PROTOPLASTS; SOLANACEAE;

EID: 0033617755     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (32)

1. Adams, M. D., Dubnick, M., Kerlavage, A. R., Moreno, R., Kelly, J. M., Utterback, T. R., Nagle, J. W., Fields, C., and Venter, C. (1992) Sequenee identification of 2375 human brain genes. Nature 355, 632-634.
2. Adams, M. D., Kerlavage, A. R., Fields, C., and Venter, C. (1993) 3400 new expressed sequence tags identify diversity of transcripts in human brain. Nature Genet. 4, 256-267.
3. Altschul, S. F., Gish, W., Myers, M. E. W., and Lipman, D. J. (1990) Basic local alignment search tool. J. Mol. Biol. 215, 403-410.
4. Chomczynski, P. and Sacchi, N. (1987) Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162, 156.
5. Cooke, R., Raynal, M., Laudie, M., Grellet, F., Delseny, M., Morris, P.-C., Guerrier, D., Giraudat, J., Quigley, F., Clabault, G., Li, Y-F., Mache, R., Krivitzky, M., Gy, I. J., Kreis, M., Lecharny, A., Parmentier, Y. Marbach, J., Fleck, J., Clement, B., Philipps, G., Herve, C., Bardet, C., Tremousaygue, D., Lescure, B., Lacomme, C., Roby, D., Jourjon, M.-F., Chabrier, P., Charpenteau, J.-L., Desprez, T., Amselem, J., Chiapello, H., and Hofte, H. (1996) Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 nonredundant ESTs. Plant J. 9, 101-124.
6. Coux, O., Tanaka, K., and Goldberg, A. L. (1996) Structure and function of the 20S and 26S proteasomes. Annu. Rev. Biochem. 65, 801-847.
7. Criqui, M. C., Jamet, E., Parmentier, J., Marbach, J., Durr, A., and Fleck, J. (1992) Isolation and characterization of a plant cDNA showing homologies to animal glutathione peroxidase. Plant Mol. Biol. 18, 623-627.
8. Fleck, D. E., Durr, A., Lett, M. C., and Hirth, L. (1979) Changes in protein synthesis during the initial stage of life of tobacco protoplasts. Planta 145, 279-285.
9. Grosset, J., Meyer, Y., Chartier, Y., Kaufmann, S., Legrand, M., and Fritig, B. (1990) Tobacco mesophyll protoplasts synthesize 1,3-β-glucanase, chitinases and osmotins during in vitro culture. Plant Physiol. 92, 502-527.
10. Halevy, A. H. (1985) Pollination induced corolla senescence; in Processes and Control of Plant Senescence, Abraham, L. Y., Halevy, H., and Frenkel, C. (eds.), pp. 132-138, CRC Press, Florida.
11. Höfte, H., Desperez, T., Amselem, J., Chiapello, H., and Caboche, M. (1993) An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana. Plant J. 4, 1051-1061.
12. Jamet, E., Durr, A., Parmentier, Y. Criqui, M. C., and Fleck, J. (1990) Is ubiquitin involved in the dedifferentiation of higher plant cells? Cell Differ. Dev. 29, 37-46.
13. Kim, S.-G. and Kim, D. J. (1986) Protoplast culture in five cultivars of N. tabacum L. by modified Murashige and Skoog medium. Korean J. Bot. 29, 197-205.
14. Kwak, J. M., Kim, S. A., Soh, M. S., Park, Y. S., Shin, E. S., Kim, Y. J., Kwun, I. C., and Nam, H. G. (1996) Characterization of 475 Expressed Sequence Tags generated from root cDNA clones of Brassica napus by single-pass sequencing. Mol. Cells 6, 563-570.
15. Magyar, Z., Meszaros, T., Miskolczi, P., Deak, M., Feher, M., Brown, S., Kondorosi, E., Athanasiadis, A., Pongor, S., Bilgin, M., Bako, L., Koncz, C., and Dudits, D. (1997) Cell cycle phase specificity of putative cyclin-dependent kinase variants in synchronized alfalfa cells. Plant Cell 9, 223-235.
16. McCombie, W. R., Adams, M. D., Kelley, J. M., FitzGerald, M. G., Utterback, T. R., Khan, M., Dubnick, M., Kerlavage, A. R., Venter, J. C., and Fields, C. (1992) Ceanorhabditis elegans expressed sequence tags identify gene families and potential disease gene homologues. Nature Genet. 1, 124-131.
17. Morgan, D. O. (1995) Principle of CDK regulation. Nature 374, 131-134.
18. Newman, T., de Bruijin, F. J., Green, P., Keegstra, K., Kende, H., McIntosh, L., Ohlrogge, J., Raikhel, N., Somerville, S., Thomashow, M., Retzel, E., and Somerville, C. (1994) Genes galore: A summary of methods for accessing results from large-scale partial sequencing of anonymous Arabidopsis cDNA clones. Plant Physiol. 106, 1241-1255.
19. Nomura, M., Gourse, R., and Baughman, G. (1984) Regulation of the synthesis of ribosomes and ribosomal components. Annu. Rev. Biochem. 53, 75-118.
20. Oh, M.-H. and Kim, S.-G. (1994) Plant regeneration from petal protoplast culture of Petunia hybrida. Plant Cell, Tissue and Organ Culture 36, 275-283.
21. Park, Y. S., Kwak, J. M., Kwon, O.-Y., Kim, Y. S., Lee, D. S., Cho, M. J., Lee, H. H., and Nam, H. G. (1993) Generation of expressed sequence tags of random root cDNA clones of Brassica napus by single-run partial sequencing. Plant Physiol. 103, 359-370.
22. Pines, J. (1995) Cyclins and cyclin-dependent kinases: A biochemical view. Biochem. J. 308, 697-711.
23. Reichheld, J. P., Gigot, C., and Chaubet-Gigot, N. (1998) Multilevel regulation of histone gene expression during the cell cycle in tabacco cells. Nucleic Acids Res. 26, 3255-3262.
24. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp. 1.38-1.41, NY.
25. Sasaki, T., Song, J., Koga-Ban, Y., Matsui, E., Fang, F., Higo, H., Nagasaki, H., Hori, M., Miya, M., Murayama-Kayano, E., Takiguchi, T., Takasuga, A., Niki, T., Ishimaru, K., Ikeda, H., Yamamoto, Y., Mukai, Y., Ohta, I., Miyadera, N., Havukkala, I., and Minobe, Y. (1994) Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library. Plant J. 6, 615-624.
26. Shen, B., Carneiro, N., Torres-Jerez, I., Stevenson, B., McCreery, T., Helentjaris, T., Baysdorfer, C., Almira, E., Ferl, R. J., Habben, J. E., and Larkins, B. (1994) Partial sequencing and mapping of clones from two maize cDNA libraries. Plant Mol. Biol. 26, 1085-1101.
27. Staiger, C. J., Gibbon, B. C., Kovar, D. R., and Zonia, L. E. (1997) Profilin and actin-depolymerizing factor: modulators of actin organization in plants. Trends Plant Sci. 2, 275-281.
28. Takehashi, Y. and Nagata, T. (1992) ParB: an auxin-regulated gene encoding glutathione S-transferase. Proc. Natl. Acad. Sci. USA 76, 4350-4354.
29. Trehin, C., Planchais, S., Glab, N., Perennes, C., Tregear, J., and Bergounioux, C. (1998) Cell cycle regulation by growth regulators: involvement of auxin and cytokinin in the re-entry of Petunia protoplasts into the cell cycle. Planta 206, 215-224.
30. Uchimiya, H., Kidou, S.-I., Shimazaki, T., Aotsuku, S., Takamatsu, S., Nishi, R., Hashimoto, H., Matsubayashi, Y., Kidou, N., Umeda, M., and Kato, A. (1992) Random sequencing of cDNA libraries reveals a variety if expressed genes in cultured cells of rice (Oryza sativa L.). Plant J. 2, 1005-1009.
31. Umeda, M., Hara, C., Matubayashi, Y., Li, H.-H., Liu, Q., Tadokoro, F., Aotsuku, S., and Uchimiya, H. (1994) Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways. Plant Mol. Biol. 25, 469-478.
32. Vierstra, R. D. (1996) Proteolysis in plants: mechanism and functions. Plant Mol. Biol. 32, 275-302.