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Volumn 285, Issue 4, 1999, Pages 1525-1536

A mutant of BamHI restriction endonuclease which requires N6-methyladenine for cleavage

Author keywords

Altered specificity; BamHI restriction endonuclease; Cleavage specificity; N6 methyladenine; Protein engineering

Indexed keywords

6 N METHYLADENINE; DNA; MUTANT PROTEIN; RESTRICTION ENDONUCLEASE;

EID: 0033614013     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1998.2409     Document Type: Article
Times cited : (15)

References (28)
  • 1
    • 0024554174 scopus 로고
    • The great GATC: DNA methylation in E. coli
    • Barras F., Marinus M. G. The great GATC: DNA methylation in E. coli. Trends Genet. 1989;139-143.
    • (1989) Trends Genet. , pp. 139-143
    • Barras, F.1    Marinus, M.G.2
  • 3
    • 0028303476 scopus 로고
    • Direct selection of binding proficient/catalytic deficient variants of Bam HI endonuclease
    • Dorner L. F., Schildkraut I. Direct selection of binding proficient/catalytic deficient variants of Bam HI endonuclease. Nucl. Acids Res. 22:1994;1068-1074.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 1068-1074
    • Dorner, L.F.1    Schildkraut, I.2
  • 4
    • 0033613907 scopus 로고    scopus 로고
    • Genetic analysis of the base-specific contacts of Bam HI endonuclease
    • Dorner L. F., Bitiniate J., Whitaker R., Schildkraut I. Genetic analysis of the base-specific contacts of Bam HI endonuclease. J. Mol. Biol. 285:1999;1515-1523.
    • (1999) J. Mol. Biol. , vol.285 , pp. 1515-1523
    • Dorner, L.F.1    Bitiniate, J.2    Whitaker, R.3    Schildkraut, I.4
  • 5
    • 0018799813 scopus 로고
    • The effect of differential methylation by Escherichia coli of plasmid DNA and phage T7 and lambda DNA on the cleavage by restriction endonuclease MboI from Moraxella bovis
    • Dreiseikelmann B., Eichenlaub R., Wackernagel W. The effect of differential methylation by Escherichia coli of plasmid DNA and phage T7 and lambda DNA on the cleavage by restriction endonuclease MboI from Moraxella bovis. Biochim. Biophys. Acta. 562:1979;418-428.
    • (1979) Biochim. Biophys. Acta , vol.562 , pp. 418-428
    • Dreiseikelmann, B.1    Eichenlaub, R.2    Wackernagel, W.3
  • 6
    • 0031591392 scopus 로고    scopus 로고
    • Specific binding by Eco RV endonuclease to its DNA recognition site GATATC
    • Engler L. E., Welch K. K., Jen-Jacobson L. Specific binding by Eco RV endonuclease to its DNA recognition site GATATC. J. Mol. Biol. 269:1997;82-101.
    • (1997) J. Mol. Biol. , vol.269 , pp. 82-101
    • Engler, L.E.1    Welch, K.K.2    Jen-Jacobson, L.3
  • 7
    • 0022424624 scopus 로고
    • NMR studies on oligodeoxyribonucleotides containing the dam methylation site GATC. Comparison between d(GGATCC) and d(GGm6ATCC)
    • Fazakerley G. V., Teóule R., Guy A., Fritzsche H., Guschlbauer W. NMR studies on oligodeoxyribonucleotides containing the dam methylation site GATC. Comparison between d(GGATCC) and d(GGm6ATCC). Biochemistry. 24:1985;4540-4548.
    • (1985) Biochemistry , vol.24 , pp. 4540-4548
    • Fazakerley, G.V.1    Teóule, R.2    Guy, A.3    Fritzsche, H.4    Guschlbauer, W.5
  • 8
    • 0019878376 scopus 로고
    • Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis
    • Fried M., Crothers D. M. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis. Nucl. Acids Res. 9:1981;6505-6525.
    • (1981) Nucl. Acids Res. , vol.9 , pp. 6505-6525
    • Fried, M.1    Crothers, D.M.2
  • 9
    • 0019332757 scopus 로고
    • Sequence specific endonuclease Bam HI. Effect of hydrophobic reagents on sequence recognition and catalysis
    • George J., Blakesley R. W., Chirikjian J. G. Sequence specific endonuclease Bam HI. Effect of hydrophobic reagents on sequence recognition and catalysis. J. Biol. Chem. 255:1980;6521-6524.
    • (1980) J. Biol. Chem. , vol.255 , pp. 6521-6524
    • George, J.1    Blakesley, R.W.2    Chirikjian, J.G.3
  • 10
    • 0026410002 scopus 로고
    • Structural aspects of metal liganding to functional groups in proteins
    • Glusker J. P. Structural aspects of metal liganding to functional groups in proteins. Advan. Protein Chem. 42:1991;1-76.
    • (1991) Advan. Protein Chem. , vol.42 , pp. 1-76
    • Glusker, J.P.1
  • 11
    • 0018900307 scopus 로고
    • Physical and kinetic properties of the site specific endonuclease Bam HI from Bacillus amyloliquefaciens
    • Hinsch B., Kula M. R. Physical and kinetic properties of the site specific endonuclease Bam HI from Bacillus amyloliquefaciens. Nucl. Acids Res. 8:1980;623-633.
    • (1980) Nucl. Acids Res. , vol.8 , pp. 623-633
    • Hinsch, B.1    Kula, M.R.2
  • 12
    • 0028305263 scopus 로고
    • Sol I, a novel isoschizomer of Bam HI isolated from Streptoverticillium olivoverticillatum
    • Hwang H. Y., Yim J. Sol I, a novel isoschizomer of Bam HI isolated from Streptoverticillium olivoverticillatum. Nucl. Acids Res. 22:1994;2197.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 2197
    • Hwang, H.Y.1    Yim, J.2
  • 14
    • 0028157348 scopus 로고
    • Mutagenesis supports water mediated recognition in the trp repressor-operator system
    • Joachimiak A., Haran T. E., Sigler P. B. Mutagenesis supports water mediated recognition in the trp repressor-operator system. EMBO J. 13:1994;367-372.
    • (1994) EMBO J. , vol.13 , pp. 367-372
    • Joachimiak, A.1    Haran, T.E.2    Sigler, P.B.3
  • 15
    • 0018880654 scopus 로고
    • Purification and properties of the complementary endonucleases Dpn I and Dpn II
    • Lacks S. A. Purification and properties of the complementary endonucleases Dpn I and Dpn II. Methods Enzymol. 65:1980;138-146.
    • (1980) Methods Enzymol. , vol.65 , pp. 138-146
    • Lacks, S.A.1
  • 16
    • 0025203657 scopus 로고
    • The energetic basis of specificity in the Eco RI endonuclease-DNA interaction
    • Lesser D. R., Kurpiewski M. R., Jen-Jacobson L. The energetic basis of specificity in the Eco RI endonuclease-DNA interaction. Science. 250:1990;776-786.
    • (1990) Science , vol.250 , pp. 776-786
    • Lesser, D.R.1    Kurpiewski, M.R.2    Jen-Jacobson, L.3
  • 17
    • 85030358439 scopus 로고
    • Genetics of Bam HI endonuclease cleavage of form I SV40 DNA
    • Nardone G., Wastney M., Hensely P., Chirikjian J. G. Genetics of Bam HI endonuclease cleavage of form I SV40 DNA. Fed. Proc. 45:1986a;1504.
    • (1986) Fed. Proc. , vol.45 , pp. 1504
    • Nardone, G.1    Wastney, M.2    Hensely, P.3    Chirikjian, J.G.4
  • 18
    • 0023034951 scopus 로고
    • Differences in the kinetic properties of Bam HI endonuclease and methylase with linear DNA substrates
    • Nardone G., George J., Chirikjian J. G. Differences in the kinetic properties of Bam HI endonuclease and methylase with linear DNA substrates. J. Biol. Chem. 261:1986b;12128-12133.
    • (1986) J. Biol. Chem. , vol.261 , pp. 12128-12133
    • Nardone, G.1    George, J.2    Chirikjian, J.G.3
  • 19
    • 0030867835 scopus 로고    scopus 로고
    • Catalytic & DNA binding properties of Pvu II restriction endonuclease mutants
    • Nastri H. G., Evans P. D., Walker I. H., Riggs P. D. Catalytic & DNA binding properties of Pvu II restriction endonuclease mutants. J. Biol. Chem. 272:1997;25761-25767.
    • (1997) J. Biol. Chem. , vol.272 , pp. 25761-25767
    • Nastri, H.G.1    Evans, P.D.2    Walker, I.H.3    Riggs, P.D.4
  • 20
    • 0029048413 scopus 로고
    • Structure of Bam HI endonuclease bound to DNA: Partial folding and unfolding on DNA binding
    • Newman M., Strzelecka T., Dorner L. F., Schildkraut I., Aggarwal A. K. Structure of Bam HI endonuclease bound to DNA: partial folding and unfolding on DNA binding. Science. 269:1995;656-663.
    • (1995) Science , vol.269 , pp. 656-663
    • Newman, M.1    Strzelecka, T.2    Dorner, L.F.3    Schildkraut, I.4    Aggarwal, A.K.5
  • 21
    • 0028272057 scopus 로고
    • The dam and dcm strains of Escherichi coli: A review
    • Palmer B. R., Marinus M. G. The dam and dcm strains of Escherichi coli: a review. Gene. 143:1994;1-12.
    • (1994) Gene , vol.143 , pp. 1-12
    • Palmer, B.R.1    Marinus, M.G.2
  • 22
    • 0031865014 scopus 로고    scopus 로고
    • REBASE: Restriction enzymes and methylases
    • Roberts R. J., Macelis D. REBASE: restriction enzymes and methylases. Nucl. Acids Res. 26:1998;338-350.
    • (1998) Nucl. Acids Res. , vol.26 , pp. 338-350
    • Roberts, R.J.1    Macelis, D.2
  • 23
    • 0028944994 scopus 로고
    • Heterogeneity in molecular recognition by restriction endonucleases: Osmotic and hydrostatic pressure effects onBam HI, Pvu II, and Eco RV specificity
    • Robinson C. R., Sligar S. G. Heterogeneity in molecular recognition by restriction endonucleases: osmotic and hydrostatic pressure effects onBam HI, Pvu II, and Eco RV specificity. Proc. Natl Acad. Sci. USA. 92:1995;3444-3448.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 3444-3448
    • Robinson, C.R.1    Sligar, S.G.2
  • 24
    • 0031047683 scopus 로고    scopus 로고
    • The role of water in protein-DNA interactions
    • Schwabe J. W. The role of water in protein-DNA interactions. Curr. Opin. Struct. Biol. 7:1997;126-134.
    • (1997) Curr. Opin. Struct. Biol. , vol.7 , pp. 126-134
    • Schwabe, J.W.1
  • 25
    • 0024322164 scopus 로고
    • Discrimination between DNA sequences by the Eco RV restriction endonuclease
    • Taylor J. D., Halford S. E. Discrimination between DNA sequences by the Eco RV restriction endonuclease. Biochemistry. 28:1989;6198-6207.
    • (1989) Biochemistry , vol.28 , pp. 6198-6207
    • Taylor, J.D.1    Halford, S.E.2
  • 26
    • 0021112461 scopus 로고
    • Thermodynamic parameters governing interaction of Eco RI endonuclease with specific and nonspecific DNA sequences
    • Terry B. J., Jack W. E., Rubin R. A., Modrich P. Thermodynamic parameters governing interaction of Eco RI endonuclease with specific and nonspecific DNA sequences. J. Biol. Chem. 258:1983;9820-9825.
    • (1983) J. Biol. Chem. , vol.258 , pp. 9820-9825
    • Terry, B.J.1    Jack, W.E.2    Rubin, R.A.3    Modrich, P.4
  • 27
    • 0031717755 scopus 로고    scopus 로고
    • The role of metals in the catalysis of restriction endonuclease Bam HI
    • Viadiu H., Aggarwal A. K. The role of metals in the catalysis of restriction endonuclease Bam HI. Nature Struct. Biol. 5:1998;910-916.
    • (1998) Nature Struct. Biol. , vol.5 , pp. 910-916
    • Viadiu, H.1    Aggarwal, A.K.2
  • 28
    • 0028934112 scopus 로고
    • Specific DNA recognition by Eco RV restriction endonuclease induced by calcium ions
    • Vipond I. B., Halford S. E. Specific DNA recognition by Eco RV restriction endonuclease induced by calcium ions. Biochemistry. 34:1995;1113-1119.
    • (1995) Biochemistry , vol.34 , pp. 1113-1119
    • Vipond, I.B.1    Halford, S.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.