Contribution of a buried hydrogen bond to λ repressor folding kinetics

Biochemistry

Volumn 38, Issue 21, 1999, Pages 6761-6768

  Myers, Jeffrey K ^a   Oas, Terrence G ^a  

^a DUKE UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID;

ARTICLE; CHEMICAL REACTION KINETICS; HYDROGEN BOND; MUTATION; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DENATURATION; PROTEIN FOLDING; PROTEIN INTERACTION; PROTEIN STABILITY; PROTEIN STRUCTURE; PROTEIN VARIANT; REACTION TIME;

BACTERIOPHAGE LAMBDA; DNA-BINDING PROTEINS; HYDROGEN BONDING; KINETICS; MUTAGENESIS, SITE-DIRECTED; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PROTEIN DENATURATION; PROTEIN FOLDING; REPRESSOR PROTEINS; TEMPERATURE; VIRAL PROTEINS;

EID: 0033602841     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990088x     Document Type: Article

References (36)

1. Baldwin, R. L. (1995) J. Biomol. NMR 5, 103-109.
2. Dill, K. A., and Chan, H. S. (1997) Nat. Struct. Biol. 4, 10-19.
3. Onuchic, J. N., Socci, N. D., Luthey-Schulten, Z., and Wolynes, P. G. (1996) Folding Des. 1, 441-450.
4. Matthews, B. W. (1995) Adv. Protein Chem. 46, 240-311.
5. Pace, C. N., Shirley, B. A., McNutt, M., and Gajiwala, K. (1996) FASEB J. 10, 75-83.
6. Huang, G. S., and Oas, T. G. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 6878-6882.
7. Burton, R. E., Huang, G. S., Daugherty, M. A., Fullbright, P. W., and Oas, T. G. (1996) J. Mol. Biol. 263, 311-322.
8. Burton, R. E., Huang, G. S., Daugherty, M. A., Calderone, T. L., and Oas, T. G. (1997) Nat. Struct. Biol. 4, 305-310.
9. Beamer, L. J., and Pabo, C. O. (1992) J. Mol. Biol. 227, 177-196.
10. Marqusee, S., and Sauer, R. T. (1994) Protein Sci. 3, 2217-2225.
11. Burton, R. E., Myers, J. K., and Oas, T. G. (1998) Biochemistry 37, 5337-5343.
12. Karplus, M., and Weaver, D. L. (1994) Protein Sci. 3, 650-668.
13. Fersht, A. R. (1993) FEBS Lett. 325, 5-16.
14. Itzhaki, L. S., Otzen, D. E., and Fersht, A. R. (1995) J. Mol. Biol. 254, 260-288.
15. Milla, M. E., Brown, B. M., Waldburger, C. D., and Sauer, R. T. (1995) Biochemistry 34, 13194-13919.
16. Martinez, J. C., Pisabarro, M. T., and Serrano, L. (1998) Nat. Struct. Biol. 5, 721-729.
17. Grantcharova, V. P., Riddle, D. S., Santiago, J. V., and Baker, D. (1998) Nat. Struct. Biol. 5, 714-720.
18. Kuhlman, B., Boice, J. A., Fairman, R., and Raleigh, D. P. (1998) Biochemistry 37, 1025-32.
19. Kunkel, T. A., Roberts, J. D., and Zakour, R. A. (1987) Methods Enzymol. 154, 367-382.
20. Pace, C. N. (1986) Methods Enzymol. 131, 266-280.
21. Nicholson, E. M., and Scholtz, J. M. (1996) Biochemistry 35, 11369-11378.
22. Horovitz, A., and Fersht, A. R. (1990) J. Mol. Biol. 214, 613-617.
23. Pace, C. N., Vajdos, F., Fee, L., Grimsley, G., and Gray, T. (1995) Protein Sci. 4, 2411-2423.
24. Burton, R. E., Busby, R. S., and Oas, T. G. (1998) J. Biomol. NMR 11, 355-360.
25. Chen, B.-L., Baase, W. A., Nicholson, H., and Schellman, J. A. (1992) Biochemistry 31, 1464-1476.
26. Myers, J. K., and Pace, C. N. (1996) Biophys. J. 71, 2033-2039.
27. Hvidt, A., and Nielsen, S. O. (1966) Adv. Protein Chem. 21, 287-386.
28. Myers, J. K., Pace, C. N., and Scholtz, J. M. (1995) Protein Sci. 4, 2138-2148.
29. Tanford, C. (1970) Adv. Protein Chem. 24, 1-95.
30. Matouschek, A., Serrano, L., and Fersht, A. R. (1994) in Mechanisms of protein folding (Pain, R. H., Ed.) pp 137-159, IRL Press, Oxford.
31. Fersht, A. R., Matouschek, A., and Serrano, L. (1992) J. Mol. Biol. 224, 771-782.
32. Pappu, R. V., and Weaver, D. L. (1998) Protein Sci. 7, 480-490.
33. Cavagnero, S., Dyson, H. J., and Wright, P. E. (1999) J. Mol. Biol. 285, 269-282.
34. Baldwin, R. L., and Rose, G. D. (1999) Trends Biochem. Sci. 24, 26-33.
35. Baldwin, R. L., and Rose, G. D. (1999) Trends Biochem. Sci. 24, 77-83.
36. Kraulis, P. K. (1991) J. Appl. Crystallogr. 24, 946-950.