The Goodwin model: Simulating the effect of cycloheximide and heat shock on the sporulation rhythm of Neuvospora crassa

Journal of Theoretical Biology

Volumn 196, Issue 4, 1999, Pages 483-494

  Ruoff, Peter ^a   Vinsjevik, Merete ^a   Mohsenzadeh, Saadat ^b   Rensing, Ludger ^b  

^a UNIVERSITY OF STAVANGER   (Norway)

^b UNIVERSITY OF BREMEN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOHEXIMIDE; FUNGAL PROTEIN;

ARTICLE; CIRCADIAN RHYTHM; FUNGUS MUTANT; HEAT SHOCK; NEGATIVE FEEDBACK; NEUROSPORA CRASSA; NONHUMAN; OSCILLATOR; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN SYNTHESIS INHIBITION; SIMULATION; SPOROGENESIS;

DROSOPHILA; FUNGI; NEUROSPORA CRASSA;

EID: 0033590727     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1006/jtbi.1998.0846     Document Type: Article

References (36)

1. Aronson, B. D., Johnson, K. A., Loros, J. J. & Dunlap, J. C. (1994). Negative feedback defining a circadian clock: Autoregulation of the clock Gene frequency. Science 263, 1578-1584.
2. Cornelius, G. & Rensing, L. (1982). Can phase response curves of various treatments of circadian rhythms be explained by effects on protein synthesis and degradation? BioSystems 15, 35-47.
3. Cornelius, G. & Rensing, L. (1986). Circadian rhythm of heat shock protein synthesis of Neurospora crassa. Eur. J. Cell Biol. 40, 130-132.
4. Cornelius, G., Schröder-Lorenz, A. & Rensing, L. (1985). Circadian clock control of protein synthesis and degradation in Gonyaulax polyedra. Planta 166, 365-370.
5. Dharmanda, S. & Feldman, J. F. (1979). Spatial distribution of circadian clock phase in aging cultures of Neurospora crassa. Plant Physiol. 63, 1049-1054.
6. Dunlap, J. C. (1998). An end in the beginning. Science 280, 1548-1549.
7. Dunlap, J. C. & Feldman, J. F. (1988). On the role of protein synthesis in the circadian clock of Neurospora crassa. Proc. Nat. Acad. Sci. U.S.A. 85, 1096-1100.
8. Edery, I., Rutila, J. E. & Rosbash, M. (1994). Phase shifting of the circadian clock by induction of the Drosophila period protein. Science 263, 237-240.
9. Feldman, J. F. (1967). Lengthening the period of a biological clock in Euglena by cycloheximide, an inhibitor of protein synthesis. Proc. Nat. Acad. Sci. U.S.A. 57, 1080-1087.
10. Francis, C. D. & Sargent, M. L. (1979). Effects of temperature perturbations on circadian conidiation in Neurospora. Plant Physiol. 64, 1000-1004.
11. Garceau, N. Y., Liu, Y., Loros, J. J. & Dunlap, J. C. (1997). Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY. Cell 89, 469-476.
12. Goodwin, B. C. (1963). Temporal Organization in Cells. A Dynamic Theory of Cellular Control Processes. New York: Academic Press.
13. Goodwin, B. C. (1965). Oscillatory behavior in enzymatic control processes. In: Advances in Enzyme Regulation, Vol. 3 (Weber, G., ed.) pp. 425-438. Oxford: Pergamon Press.
14. Goto, R., Kaue, R., Morishita, M. & Nakashima, H. (1994). Effects of temperature on the circadian conidiation rhythm of temperature-sensitive mutants of Neurospora crassa. Plant Cell Physiol. 35, 613-618.
15. Hindmarsh, A. C. (1980). LSODE and LSODI, two new initial value ordinary differential equation solvers. ACM-SIGNUM Newslett. 15, 10-11.
16. Khalsa, S. B. S., Whitmore, D. & Block, G. (1992). Stopping the circadian pacemaker with inhibitors of protein synthesis. Proc. Nat. Acad. Sci. U.S.A. 89, 10862-10866.
17. Lakin-Thomas, P. L. (1998). Circadian rhythmicity in Neurospora crassa. In: Biological Rhythms and Photoperiodism in Plants (Lumsden, P. J. & Millar, A. J., eds) pp. 119-134. Oxford: Bios Scientific Publishers.
18. Lakin-Thomas, P. L. & Brody, S. (1985). Circadian rhythms in Neurospora crassa: Interaction between clock mutations. Genetics 109, 49-66.
19. Lakin-Thomas, P. L., Brody, S. & Coté, G. G. (1991). Amplitude model for the effects of mutations and temperature on period and phase resetting of the Neurospora circadian oscillator. J. Biol. Rhythms 6, 281-297.
20. Lakin-Thomas, P. L., Coté, G. G. & Brody, S. (1990). Circadian rhythms in Neurospora crassa: Biochemistry and genetics. Crit. Rev. Microbiol. 17, 365-416.
21. Maier, R. W. (1973). Phase shifting of the circadian rhythm of eclosion in Drosophila pseudoobscura with temperature pulses. J. Interdiscipl. Cycle Res. 4, 125-135.
22. Meyer, U., Schweim, P. & Rensing, L. (1995). Close correlation between heat shock response and cytotoxicity in Neurospora crassa treated with aliphatic alcohols and phenols. Appl. Environ. Microbiol. 61, 979-984.
23. Mohsenzadeh, S., Xu, C., Fracella, F. & Rensing, L. (1994). Heat shock inhibits and activates different protein degradation pathways and proteinase activities in Neurospora crassa. FEMS Microbiol. Lett. 124, 215-224.
24. Nakashima, H. (1984). Effects of respiratory inhibitors on respiration, ATP contents, and the circadian conidiation rhythm of Neurospora crassa. Plant Physiol. 76, 612-614.
25. Nakashima, H. (1987). Comparison of phase shifting by temperature of wild-type Neurospora crassa and the clock mutant frq-7. J. Interdiscipl. Cycle Res. 18, 1-8.
26. Nakashima, H., Perlman, J. & Feldman, J. F. (1981). Cycloheximide-induced phase shifting of the circadian clock of Neurospora. Am. J. Physiol. 241, R31-R35.
27. Rensing, L. & Monnerjahn, C. (1996). Heat shock proteins and circadian rhythms. Chronobiol. Int. 13, 239-250.
28. Rensing, L., Bos, A., Kroeger, J. & Cornelius, G. (1987). Possible link between circadian rhythm and heat shock response in Neurospora crassa. Chronobiol. Int. 4, 543-549.
29. Rensing, L., Kallies, A., Gebauer, G. & Mohsenzadeh, S. (1995). The effects of temperature change on the circadian clock of Neurospora. In: Circadian Clocks and their Adjustment (Waterhouse, J. & Redfern, P., eds) pp. 26-50. Ciba Foundation Symposium 183. Chichester: John Wiley & Sons.
30. Ruoff, P. & Rensing, L. (1996). The temperature-compensated Goodwin model simulates many circadian clock properties. J. Theor. Biol. 179, 275-285.
31. Ruoff, P., Mohsenzadeh, S. & Rensing, L. (1996). Circadian rhythm and protein turnover: The influence of temperature on the period lengths of clock mutants simulated by the Goodwin oscillator. Naturwissenschaften 83, 514-517.
32. Schulz, R., Pilatus, U. & Rensing, L. (1985). On the role of energy metabolism in Neurospora circadian clock function. Chronobiol. Int. 2, 223-233.
33. Sidote, D., Majercak, J. & Edery, I. (1998). Differential effects of light and heat on the Drosophila circadian clock proteins PER and TIM. Mol. Cell Biol. 18, 2004-2013.
34. Vogel, H. A. (1956). A convenient growth medium for Neurospora (medium M). Microbiol. Gen. Bull. 15, 42-43.
35. Winfree, A. T. (1980) The Geometry of Biological Time. Chap. 1D. New York: Springer-Verlag.
36. Zimmerman, W. F., Pittendrigh, C. S. & Pavlidis, T. (1968). Temperature compensation of the circadian oscillation in Drosophila pseudoobscura and its entrainment by temperature cycles. J. Insect Physiol. 14, 669-684.