Poly(ADP-ribose) polymerase interacts with novel Drosophila ribosomal proteins, L22 and L23a, with unique histone-like amino-terminal extensions

Gene

Volumn 226, Issue 2, 1999, Pages 339-345

  Koyama, Yumi ^a   Katagiri, Shoichiro ^a   Hanai, Shuji ^a   Uchida, Kazuhiko ^a   Miwa, Masanao ^a  

^a Institute of Basic Medical Sciences   (Japan)

Author keywords

Alanine; Far Western screening; Homology; Lysine and proline rich sequence; Rp122; Rp123a

Indexed keywords

ALANINE; COMPLEMENTARY DNA; HISTONE; LYSINE; NICOTINAMIDE ADENINE DINUCLEOTIDE ADENOSINE DIPHOSPHATE RIBOSYLTRANSFERASE; PROLINE; RIBOSOME PROTEIN;

ADENOSINE DIPHOSPHATE RIBOSYLATION; AMINO TERMINAL SEQUENCE; ARTICLE; DROSOPHILA; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN MODIFICATION; PROTEIN PROCESSING; PROTEIN PROTEIN INTERACTION;

AMINO ACID SEQUENCE; ANIMALS; BLOTTING, NORTHERN; BLOTTING, WESTERN; CLONING, MOLECULAR; DNA, COMPLEMENTARY; DROSOPHILA; DROSOPHILA PROTEINS; MOLECULAR PROBES; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; POLY(ADP-RIBOSE) POLYMERASES; PROTEIN BINDING; RIBOSOMAL PROTEINS; RNA-BINDING PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

MAMMALIA;

EID: 0033590594     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(98)00529-0     Document Type: Article

References (34)

1. Azorin F., Vives J., Campos J.L., Jordán A., Lloveras J., Puigjaner L., Subirana J.A., Mayer R., Brack A. Interaction of DNA with lysine-rich polypeptides and proteins - the influence of polypeptide composition and secondary structure. J. Mol. Biol. 185:1985;371-387.
2. Bork P., Hofmann K., Bucher P., Neuwald A.F., Altschul S.F., Koonin E.V. A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins. FASEB J. 11:1997;68-76.
3. Boulikas T. At least 60 ADP-ribosylated variant histones are present in nuclei from dimethylsulfate-treated and untreated cells. EMBO J. 7:1988;57-67.
4. Boulikas T. Poly(ADP-ribosylated) histones in chromatin replication. J. Biol. Chem. 265:1990;14638-14647.
5. Böhm J., Schlaeger E.J., Knippers R. Acetylation of nucleosomal histones in vitro. Eur. J. Biochem. 112:1980;353-362.
6. Buki K.G., Bauer P.I., Hakam A., Kun E. Identification of domains of poly(ADP-ribose) polymerase for protein binding and self-association. J. Biol. Chem. 270:1995;3370-3377.
7. Chenuil A., Solignac M., Bernard M. Evolution of the large-subunit ribosomal RNA binding site for protein L23/25. Mol. Biol. Evol. 14:1997;578-588.
8. Conley E.C., Saunders J.R. Recombination-dependent recircularization of linearized pBR322 plasmid DNA following transformation of Escherichia coli. Mol. Gen. Genet. 194:1984;211-218.
9. Creissen D., Shall S. Regulation of DNA ligase activity by poly(ADP-ribose). Nature. 296:1982;271-272.
10. Darby M.K., Schmitt B., Jongstra-Bilen J., Vosberg H.P. Inhibition of calf thymus type II DNA topoisomerase by poly(ADP-ribosylation). EMBO J. 4:1985;2129-2134.
11. Deng W.P., Nickoloff J.A. Site-directed mutagenesis of virtually any plasmid by eliminating a unique site. Anal. Biochem. 200:1992;81-88.
12. Desnoyers S., Kaufmann S.H., Poirier G.G. Alteration of the nucleolar localization of poly(ADP-ribose) polymerase upon treatment with transcription inhibitors. Exp. Cell Res. 227:1996;146-153.
13. Ferro A.M., Olivera B.M. Poly(ADP-ribosylation) of DNA topoisomerase I from calf thymus. J. Biol. Chem. 259:1984;547-554.
14. Fujita Y., Okamoto T., Noshiro M., McKeehan W.L., Crabb J.W., Whitney R.G., Kato Y., Sato J.D., Takada K. A novel heparin-binding protein, HBp15, is identified as mammalian ribosomal protein L22. Biochem. Biophys. Res. Commun. 199:1994;706-713.
15. Gao J., Kim S.R., Chung Y.Y., Lee J.M., An G. Developmental and environmental regulation of two ribosomal protein genes in tobacco. Plant. Mol. Biol. 25:1994;761-770.
16. Hatakeyama T., Kimura M. Complete amino acid sequences of the ribosomal proteins L25, L29 and L31 from the archaebacterium Halobacterium marismortui. Eur. J. Biochem. 172:1988;703-711.
17. Jump D.B., Smulson M. Purification and characterization of the major nonhistone protein acceptor for poly(adenosine diphosphate ribose) in HeLa cell nuclei. Biochemistry. 19:1980;1024-1030.
18. Leer R.J., van Raamsdonk-Duin M.M., Hagendoorn M.J., Mager W.H., Planta R.J. Structural comparison of yeast ribosomal protein genes. Nucl. Acids Res. 12:1984;6685-6700.
19. Masson M., Menissier-de Murcia J., Mattei M.G., de Murcia G., Niedergang C.P. Poly(ADP-ribose) polymerase interacts with a novel human ubiquitin conjugating enzyme: hUbc9. Gene. 190:1997;287-296.
20. Masson M., Niedergang C., Schreiber V., Muller S., Menissier-de Murcia J., de Murcia G. XRCC1 is specifically associated with poly(ADP-ribose) polymerase and negatively regulates its activity following DNA damage. Mol. Cell. Biol. 18:1998;3563-3571.
21. , M., Hanai, S., Poltronieri, P., Uchida, M., Uchida, K., 1998. Functional analysis of poly(ADP-ribose) polymerase in Drosophila melanogaster. Mol. Cell. Biochem., in press.
22. Moon E., Wu R. Organization and nucleotide sequence of genes at both junctions between the two inverted repeats and the large single-copy region in the rice chloroplast genome. Gene. 70:1988;1-12.
23. Nie J., Sakamoto S., Song D., Qu Z., Ota K., Taniguchi T. Interaction of Oct-1 and automodification domain of poly(ADP-ribose) synthetase. FEBS Lett. 424:1998;27-32.
24. Oei S.L., Griesenbeck J., Schweiger M., Babich V., Kropotov A., Tomilin N. Interaction of the transcription factor YY1 with human poly(ADP-ribosyl) transferase. Biochem. Biophys. Res. Commun. 240:1997;108-111.
25. Ohashi Y., Itaya A., Tanaka Y., Yoshihara K., Kamiya T., Matsukage A. Poly(ADP-ribosyl)ation of DNA polymerase β in vitro. Biochem. Biophys. Res. Commun. 140:1986;666-673.
26. Ruiz-Carrillo A., Wangh L.J., Allfrey V.G. Processing of newly synthesized histone molecules. Science. 190:1975;117-128.
27. Rutgers C.A., Rientjes J.M., van't Riet J., Raué H.A. rRNA binding domain of yeast ribosomal protein L25 - Identification of its borders and a key leucine residue. J. Mol. Biol. 218:1991;375-385.
28. Simbulan-Rosenthal C.M., Rosenthal D.S., Hilz H., Hickey R., Malkas L., Applegren N., Wu Y., Bers G., Smulson M.E. The expression of poly(ADP-ribose) polymerase during differentiation-linked DNA replication reveals that it is a component of the multiprotein DNA replication complex. Biochemistry. 35:1996;11622-11633.
29. Smith D.B., Johnson K.S. Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. Gene. 67:1988;31-40.
30. Suzuki K., Wool I.G. The primary structure of rat ribosomal protein L23a. The application of homology search to the identification of genes for mammalian and yeast ribosomal proteins and a correlation of rat and yeast ribosomal proteins. J. Biol. Chem. 268:1993;2755-2761.
31. Uchida K., Hanai S., Ishikawa K., Ozawa Y., Uchida M., Sugimura T., Miwa M. Cloning of cDNA encoding Drosophila poly(ADP-ribose) polymerase-Leucine zipper in the auto-modification domain. Proc. Natl. Acad. Sci. USA. 90:1993;3481-3485.
32. Yoshida S., Simbulan C.M. Interaction of poly(ADP-ribose) polymerase with DNA polymerase α Mol. Cell. Biochem. 138:1994;39-44.
33. Yoshihara K., Hashida T., Yoshihara H., Tanaka Y., Ohgushi H. Enzyme-bound early product of purified poly(ADP-ribose) polymerase. Biochem. Biophys. Res. Commun. 78:1977;1281-1288.
34. Zurawski G., Zurawski S.M. Structure of the Escherichia coli S10 ribosomal protein operon. Nucl. Acids Res. 13:1985;4521-4526.