Cloning and sequence analysis of the lipase and lipase chaperone- encoding genes from Acinetobacter calcoaceticus RAG-1, and redefinition of a Proteobacterial lipase family and an analogous lipase chaperone family

Gene

Volumn 230, Issue 2, 1999, Pages 277-285

  Sullivan, Elise R ^a,b   Leahy, Joseph G ^a   Colwell, Rita R ^a,b  

^a UNIVERSITY OF MARYLAND   (United States)

^b UNIVERSITY OF MARYLAND BIOTECHNOLOGY INSTITUTE   (United States)

Author keywords

Burkholderia; Foldase; Proteus vulgaris; Pseudomonas; Transposon mutagenesis; Vibrio cholerae

Indexed keywords

BACTERIAL DNA; BACTERIAL ENZYME; CHAPERONE; TRIACYLGLYCEROL LIPASE;

ACINETOBACTER CALCOACETICUS; AMINO ACID SEQUENCE; ARTICLE; BURKHOLDERIA; DNA LIBRARY; GENE ISOLATION; GENE MAPPING; GENE SEQUENCE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN FAMILY; PROTEUS VULGARIS; PSEUDOMONAS; PSEUDOMONAS FLUORESCENS; SERRATIA MARCESCENS; VIBRIO CHOLERAE;

ACINETOBACTER CALCOACETICUS; AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; CLONING, MOLECULAR; EVOLUTION, MOLECULAR; LIPASE; MOLECULAR CHAPERONES; MOLECULAR SEQUENCE DATA; SEQUENCE HOMOLOGY, AMINO ACID; TERMINOLOGY; TRANS-ACTIVATORS;

EID: 0033574728     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(99)00026-8     Document Type: Article

References (27)

1. Bagdasarian M., Lurz R., Ruckert B., Fransklin F.C.H., Bagdasarian M.M., Frey J., Timmis K.N. Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene. 16:1981;237-247.
2. Brumlik M.J., Buckley J.T. Identification of the catalytic triad of the lipase/acyltransferase from Aeromonas hydrophila. J. Bacteriol. 178:1996;2060-2064.
3. Chihara-Siomi M., Yoshikawa K., Oshima-Hirayama N., Yamamoto K., Sogabe Y., Nakatani T., Nishioka T., Oda J. Purification, molecular cloning, and expression of lipase from Pseudomonas aeruginosa. Arch. Biochem. Biophys. 296:1992;505-513.
4. Felsenstein, J., 1993. PHYLIP (Phylogenetic inference package), version 3.5c. Department of Genetics, University of Washington, Seattle, WA.
5. Gilbert E.J. Pseudomonas lipases: biochemical properties and molecular cloning. Enzyme. Microb. Technol. 15:1993;634-645.
6. Halling S.M., Kleckner N. A symmetrical six-base-pair target site sequence determines Tn10 insertion specificity. Cell. 28:1982;155-163.
7. Hemila H., Koivula T.T., Palva I. Hormone-sensitive lipase is closely related to several bacterial proteins, and distantly related to acetylcholinesterase and lipoportein lipase: identification of a superfamily of esterases and lipases. Biochim. Biophys. Acta. 1210:1994;249-253.
8. Ihara F., Okamoto I., Nihira T., Yamada Y. Requirement in trans of the downstream limL gene for activation of lactonizing lipase from Pseudomonas sp. 109. J. Ferment. Bioeng. 73:1992;337-342.
9. Jaeger K.E., Ransac S., Dijkstra B.W., Colson C., van Heuvel M., Misset O. Bacterial lipases. FEMS Microbiol. Rev. 15:1994;29-63.
10. Juni E. Genetics and physiology of Acinetobacter. Annu. Rev. Microbiol. 32:1978;349-371.
11. Kim H.K., Lee J.K., Kim H., Oh T.-K. Characterization of an alkaline lipase from Proteus vulgaris K80 and the DNA sequence of the encoding gene. FEMS Microbiol. Lett. 135:1996;117-121.
12. Kok R.G., van Thor J.J., Nugteren-Roodzant I.M., Brouwer M.B.W., Egmond M.R., Nudel C.B., Vosman B., Hellingwerf K.J. Characterization of the extracellular lipase, LipA, of Acinetobacter calcoaceticus BD413 and sequence analysis of the cloned structural gene. Mol. Microbiol. 15:1995;803-818.
13. Kok R.G., Thor J.J., Nugteren I.M., Vosman B., Hellingwerf K.J. Characterization of lipase-deficient mutants of Acinetobacter calcoaceticus BD413: identification of a periplasmic lipase chaperone essential for the production of extracellular lipase. J. Bacteriol. 177:1995;3295-3307.
14. Leahy J.G., Jones-Meehan J.M., Pullias E.L., Colwell R.R. Transposon mutagenesis in Acinetobacter calcoaceticus RAG-1. J. Bacteriol. 175:1993;1838-1840.
15. Leahy J.G., Jones-Meehan J.M., Colwell R.R. Transformation of Acinetobacter calcoaceticus RAG-1 by electroporation. Can. J. Microbiol. 40:1994;233-236.
16. Noble M.E.M., Cleasby A., Johnson L.N., Egmond M.R., Frenken L.G.J. The crystal structure of triacylglycerol lipase from Pseudomonas glumae reveals a partially redundant catalytic aspartate. FEBS Lett. 331:1993;123-128.
17. Noble M.E.M., Cleasby A., Johnson L.N., Egmond M.R., Frenken L.G.J. Analysis of the structure of Pseudomonas glumae lipase. Protein Eng. 7:1994;559-562.
18. Ogierman M.A., Fallarino A., Riess T., Williams S.G., Attridge S.R., Manning P.A. Characterization of the Vibrio cholerae El Tor lipase operon lipAB and a protease gene downstream of the hyl region. J. Bacteriol. 179:1997;7072-7080.
19. Olsen G.J., Woese C.R., Overbeek R. The winds of (evolutionary) change: breathing new life into microbiology. J. Bacteriol. 176:1994;1-6.
20. Petersen S.B., Drablos F. A sequence analysis of lipases, esterases and related proteins. Woolley P., Petersen S.B. Lipases: Their Structure, Biochemistry and Application. 1994;23-48 Cambridge University Press, New York, NY.
21. Richardson J.P., Greenblatt J. Control of RNA chain elongation and termination. Neidhardt C.F. Escherichia coli and Salmonella. 2nd ed. 1996;822-848 ASM Press, Washington, DC.
22. Rosenberg E., Rosenberg M., Shoham Y., Kaplan N., Sar N. Adhesion and desorption during the growth of Acinetobacter calcoaceticus on hydrocarbons. Cohen Y., Rosenburg E. Microbial Mats: Physiological Ecology of Benthic Microbial Communities. 1989;American Society for Microbiology, Washington, DC.
23. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual. 2nd ed. 1989;Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
24. Soberon-Chavez G., Palmeros B. Pseudomonas lipases: molecular genetics and potential industrial applications. Crit. Rev. Microbiol. 20:1994;95-105.
25. Starr M.P. Spirit-blue agar: a medium for the detection of lipolytic microorganisms. Science. 93:1941;333-334.
26. Svendsen A., Borch K., Barfoed M., Nielsen T.B., Gormsen E., Patkar S. Biochemical properties of cloned lipases from the Pseudomonas family. Biochim. Biophys. Acta. 1259:1995;9-17.
27. Wohlfarth S., Hoesche C., Strunk C., Winkler U.K. Molecular genetics of the extracellular lipase of Pseudomonas aeruginosa PAO1. J. Gen. Microbiol. 138:1992;1325-1335.