메뉴 건너뛰기




Volumn 20, Issue 5, 1999, Pages 432-441

V3 serotyping of HIV-1 infection: Correlation with genotyping and limitations

Author keywords

Genotyping; HIV 1; V3 serotyping

Indexed keywords

SYNTHETIC PEPTIDE;

EID: 0033560726     PISSN: 10779450     EISSN: None     Source Type: Journal    
DOI: 10.1097/00042560-199904150-00004     Document Type: Article
Times cited : (24)

References (56)
  • 1
    • 0029082118 scopus 로고
    • Variability of human immunodeficiency virus type 1 group o strains isolated from Cameroonian patients living in France
    • Loussert-Ajaka I, Chaix ML, Korber B, et al. Variability of human immunodeficiency virus type 1 group O strains isolated from Cameroonian patients living in France. J Virol 1995;69:5640-9.
    • (1995) J Virol , vol.69 , pp. 5640-5649
    • Loussert-Ajaka, I.1    Chaix, M.L.2    Korber, B.3
  • 2
    • 0029837667 scopus 로고    scopus 로고
    • HIV-1 group O infection in the USA
    • Gould K, Britvan L, Dryjanski J. HIV-1 group O infection in the USA. Lancet 1996;348:680-1.
    • (1996) Lancet , vol.348 , pp. 680-681
    • Gould, K.1    Britvan, L.2    Dryjanski, J.3
  • 7
    • 0031051743 scopus 로고    scopus 로고
    • Implications of HIV variability for transmission: Scientific and policy issues
    • Expert Group of the Joint United Nations Programme on HIV/ AIDS. Implications of HIV variability for transmission: scientific and policy issues. AIDS 1997;11:1-15.
    • (1997) AIDS , vol.11 , pp. 1-15
  • 9
    • 0028038231 scopus 로고
    • Genetic and phylogenetic analysis of env subtypes G and H in Central Africa
    • Janssens W, Heyndrickx L, Fransen K, et al. Genetic and phylogenetic analysis of env subtypes G and H in Central Africa. AIDS Res Hum Retroviruses 1994;10:877-9.
    • (1994) AIDS Res Hum Retroviruses , vol.10 , pp. 877-879
    • Janssens, W.1    Heyndrickx, L.2    Fransen, K.3
  • 10
    • 0027376350 scopus 로고
    • Diversity of V3 region sequences of human immunodeficiency viruses type 1 from the Central African Republic
    • Murphy EE, Korber B, Georges-Courbot MC, et al. Diversity of V3 region sequences of human immunodeficiency viruses type 1 from the Central African Republic. AIDS Res Hum Retroviruses 1993;9:997-1006.
    • (1993) AIDS Res Hum Retroviruses , vol.9 , pp. 997-1006
    • Murphy, E.E.1    Korber, B.2    Georges-Courbot, M.C.3
  • 11
    • 0028122996 scopus 로고
    • Genotypic subtypes of HIV-1 in Cameroon
    • Nkengasong JN, Janssens W, Heyndrickx L, et al. Genotypic subtypes of HIV-1 in Cameroon. AIDS 1994;8:1405-12.
    • (1994) AIDS , vol.8 , pp. 1405-1412
    • Nkengasong, J.N.1    Janssens, W.2    Heyndrickx, L.3
  • 12
    • 0028828669 scopus 로고
    • Detection of diverse HIV-1 genetic subtypes in the USA
    • Brodine SK, Mascola JR, Weiss PJ, et al. Detection of diverse HIV-1 genetic subtypes in the USA. Lancet 1995;346:1198-9.
    • (1995) Lancet , vol.346 , pp. 1198-1199
    • Brodine, S.K.1    Mascola, J.R.2    Weiss, P.J.3
  • 13
    • 0027950905 scopus 로고
    • HIV-1 sequence subtype D in the United States
    • Gao F, Yue L, Hill SC, et al. HIV-1 sequence subtype D in the United States. AIDS Res Hum Retroviruses 1994;10:625-7.
    • (1994) AIDS Res Hum Retroviruses , vol.10 , pp. 625-627
    • Gao, F.1    Yue, L.2    Hill, S.C.3
  • 15
    • 0028886928 scopus 로고
    • Multiple introductions of HIV-1 subtype E into the western hemisphere
    • Artenstein AW, Coppola J, Brown AE, et al. Multiple introductions of HIV-1 subtype E into the western hemisphere. Lancet 1995;346:1197-8.
    • (1995) Lancet , vol.346 , pp. 1197-1198
    • Artenstein, A.W.1    Coppola, J.2    Brown, A.E.3
  • 16
    • 0029329991 scopus 로고
    • Epidemiologic and evolutionary relationships between Romanian and Brazilian HIV-1 subtype F strains
    • Bandea CI, Ramos A, Pieniazek D, et al. Epidemiologic and evolutionary relationships between Romanian and Brazilian HIV-1 subtype F strains. Emerg Infect Dis 1995;1:91-3.
    • (1995) Emerg Infect Dis , vol.1 , pp. 91-93
    • Bandea, C.I.1    Ramos, A.2    Pieniazek, D.3
  • 17
    • 0028771725 scopus 로고
    • HIV-1 subtype C in Brazil
    • Csillag C. HIV-1 subtype C in Brazil. Lancet 1994;344:1354.
    • (1994) Lancet , vol.344 , pp. 1354
    • Csillag, C.1
  • 21
    • 0032499931 scopus 로고    scopus 로고
    • Multiple HIV-1 subtypes present amongst heterosexuals in Amsterdam 1988-1996: No evidence for spread of non-B subtypes
    • Op de Coul E, Lukashov VV, van Doornum GJJ, Goudsmit J, Coutinho RA. Multiple HIV-1 subtypes present amongst heterosexuals in Amsterdam 1988-1996: no evidence for spread of non-B subtypes. AIDS 1998;12:1253-5.
    • (1998) AIDS , vol.12 , pp. 1253-1255
    • Op De Coul, E.1    Lukashov, V.V.2    Van Doornum, G.J.J.3    Goudsmit, J.4    Coutinho, R.A.5
  • 22
    • 0028127380 scopus 로고
    • Identification of an env G subtype and heterogeneity of HIV-1 strains in the Russia Federation and Belarus
    • Bobkov A, Cheingsong-Popov R, Garaev M, et al. Identification of an env G subtype and heterogeneity of HIV-1 strains in the Russia Federation and Belarus. AIDS 1994;8:1649-55.
    • (1994) AIDS , vol.8 , pp. 1649-1655
    • Bobkov, A.1    Cheingsong-Popov, R.2    Garaev, M.3
  • 23
    • 0030463926 scopus 로고    scopus 로고
    • Genetic heterogeneity of HIV type 1 in Russia: Identification of H variants and relationship with epidemiological data
    • Bobkov A, Cheingsong-Popov R, Selimova L, et al. Genetic heterogeneity of HIV type 1 in Russia: identification of H variants and relationship with epidemiological data. AIDS Res Hum Retroviruses 1996;12:1687-90.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 1687-1690
    • Bobkov, A.1    Cheingsong-Popov, R.2    Selimova, L.3
  • 24
    • 0032552455 scopus 로고    scopus 로고
    • Extreme founder effect in an HIV type 1 subtype A epidemic among drug users in svetlogorsk, Belarus
    • Lukashov VV, Karamov EV, Eremin VF, Titov LP, Goudsmit J. Extreme founder effect in an HIV type 1 subtype A epidemic among drug users in Svetlogorsk, Belarus. AIDS Res Hum Retroviruses 1998;14:1299-303.
    • (1998) AIDS Res Hum Retroviruses , vol.14 , pp. 1299-1303
    • Lukashov, V.V.1    Karamov, E.V.2    Eremin, V.F.3    Titov, L.P.4    Goudsmit, J.5
  • 25
    • 2142812683 scopus 로고    scopus 로고
    • HIV-1 genetic subtype A/B recombinant strain causing an explosive epidemic in injecting drug users in Kaliningrad
    • Liitsola K, Tashkinova I, Laukkanen, et al. HIV-1 genetic subtype A/B recombinant strain causing an explosive epidemic in injecting drug users in Kaliningrad. AIDS 1998;12:1907-19.
    • (1998) AIDS , vol.12 , pp. 1907-1919
    • Liitsola, K.1    Tashkinova, I.2
  • 27
    • 0027157883 scopus 로고
    • Independent introduction of two major HIV-1 genotypes into distinct high-risk populations in Thailand
    • Ou CY, Takebe Y, Weniger BG, et al. Independent introduction of two major HIV-1 genotypes into distinct high-risk populations in Thailand. Lancet 1993;341:1171-4.
    • (1993) Lancet , vol.341 , pp. 1171-1174
    • Ou, C.Y.1    Takebe, Y.2    Weniger, B.G.3
  • 28
    • 0028346910 scopus 로고
    • Genetic analysis of human immunodeficiency virus type 1 and 2 (HIV-1 and HIV-2) mixed infections in India reveals a recent spread a HIV-1 and HIV-2 from a single ancestor for each of these viruses
    • Grez M, Dietrich U, Balfe P, et al. Genetic analysis of human immunodeficiency virus type 1 and 2 (HIV-1 and HIV-2) mixed infections in India reveals a recent spread a HIV-1 and HIV-2 from a single ancestor for each of these viruses. J Viral 1994;68:2161-8.
    • (1994) J Viral , vol.68 , pp. 2161-2168
    • Grez, M.1    Dietrich, U.2    Balfe, P.3
  • 29
    • 2642706551 scopus 로고
    • Intersubtype recombination in HIV-1 and HIV-2
    • Myers G, Korber B, Wain-Hobson S, Jeang K-T, Henderson LE, Pavlakis GN, eds. Los Alamos, NM: Los Alamos National Laboratory: Theoretical Biology and Biophysics
    • Hahn BH, Robertson DL, Sharp PM. Intersubtype recombination in HIV-1 and HIV-2, pIII-22-III-29. In: Myers G, Korber B, Wain-Hobson S, Jeang K-T, Henderson LE, Pavlakis GN, eds. Human retroviruses and AIDs 1995: a compilation and analysis of nucleic acid and amino acid sequences. Los Alamos, NM: Los Alamos National Laboratory: Theoretical Biology and Biophysics, 1995.
    • (1995) Human Retroviruses and AIDs 1995: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences
    • Hahn, B.H.1    Robertson, D.L.2    Sharp, P.M.3
  • 30
    • 0027690383 scopus 로고
    • Genetic relationships determined by a heteroduplex mobility assay: Analysis of HIV env genes
    • Delwart EL, Shpaer EG, McCutchan FE, et al. Genetic relationships determined by a heteroduplex mobility assay: analysis of HIV env genes. Science 1993;262:1257-61.
    • (1993) Science , vol.262 , pp. 1257-1261
    • Delwart, E.L.1    Shpaer, E.G.2    McCutchan, F.E.3
  • 31
    • 0027980442 scopus 로고
    • Human immunodeficiency virus type 1 evolution in vivo tracked by DNA heteroduplex mobility assays
    • Delwart EL, Sheppard HW, Walker BD, Goudsmit J, Mullins JI. Human immunodeficiency virus type 1 evolution in vivo tracked by DNA heteroduplex mobility assays. J Virol 1994;68:6672-83.
    • (1994) J Virol , vol.68 , pp. 6672-6683
    • Delwart, E.L.1    Sheppard, H.W.2    Walker, B.D.3    Goudsmit, J.4    Mullins, J.I.5
  • 32
    • 0030468316 scopus 로고    scopus 로고
    • Biological consequences of human immunodeficiency virus type 1 envelope polymorphism: Does variation matter?
    • Mc Keating JA. Biological consequences of human immunodeficiency virus type 1 envelope polymorphism: does variation matter? J Gen Virol 1996;77:2905-19.
    • (1996) J Gen Virol , vol.77 , pp. 2905-2919
    • Mc Keating, J.A.1
  • 33
    • 0029815782 scopus 로고    scopus 로고
    • Diversity of antibody binding to V3 peptides representing consensus sequences of HIV type 1 genotypes A to E: An approach for HIV type 1 serological subtyping
    • Barin F, Lahbabi Y, Buzelay L, et al. Diversity of antibody binding to V3 peptides representing consensus sequences of HIV type 1 genotypes A to E: an approach for HIV type 1 serological subtyping. AIDS Res Hum Retroviruses 1996;12:1279-89.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 1279-1289
    • Barin, F.1    Lahbabi, Y.2    Buzelay, L.3
  • 34
    • 0027967562 scopus 로고
    • Serotyping HIV type 1 by antibody binding to the V3 loop: Relationship to viral genotype
    • Cheingsong-Popov R, Lister S, Callow D, et al. Serotyping HIV type 1 by antibody binding to the V3 loop: relationship to viral genotype. AIDS Res Hum Retroviruses 1994;11:1379-86.
    • (1994) AIDS Res Hum Retroviruses , vol.11 , pp. 1379-1386
    • Cheingsong-Popov, R.1    Lister, S.2    Callow, D.3
  • 35
    • 0028149109 scopus 로고
    • Antigenic variation and serotyping of HIV type 1 from four world health organisation-sponsored HIV vaccine sites
    • Pau CP, Kai M, Holloman-Candal DL, et al. Antigenic variation and serotyping of HIV type 1 from four World Health Organisation-sponsored HIV vaccine sites. AIDS Res Hum Retroviruses 1994;11:1369-77.
    • (1994) AIDS Res Hum Retroviruses , vol.11 , pp. 1369-1377
    • Pau, C.P.1    Kai, M.2    Holloman-Candal, D.L.3
  • 36
    • 0028180237 scopus 로고
    • Reactions of Ugandan antisera with peptides encoded by V3 loop epitopes of human immunodeficiency virus type 1
    • Smith JD, Bruce CB, Featherstone ASR, et al. Reactions of Ugandan antisera with peptides encoded by V3 loop epitopes of human immunodeficiency virus type 1. AIDS Res Hum Retroviruses 1994; 10:577-83.
    • (1994) AIDS Res Hum Retroviruses , vol.10 , pp. 577-583
    • Smith, J.D.1    Bruce, C.B.2    Featherstone, A.S.R.3
  • 37
    • 0027176872 scopus 로고
    • Greater diversity of the HIV-1 V3 neutralization domain in Tanzania compared with the Netherlands: Serological and genetic analysis
    • Zwart G, Wolf TFW, Bookelman R, et al. Greater diversity of the HIV-1 V3 neutralization domain in Tanzania compared with the Netherlands: serological and genetic analysis. AIDS 1993;7:467-74.
    • (1993) AIDS , vol.7 , pp. 467-474
    • Zwart, G.1    Wolf, T.F.W.2    Bookelman, R.3
  • 38
    • 2642612818 scopus 로고    scopus 로고
    • Extent of antigenic diversity in the V3 region of the surface glycoprotein, gp120, of human immunodeficiency virus type 1 (HIV-1) group M and consequences for serotyping
    • Plantier JC, Le Pogam S, Poisson F, Lejeune B, Barin F. Extent of antigenic diversity in the V3 region of the surface glycoprotein, gp120, of human immunodeficiency virus type 1 (HIV-1) group M and consequences for serotyping. J Virol 1998;72:677-83.
    • (1998) J Virol , vol.72 , pp. 677-683
    • Plantier, J.C.1    Le Pogam, S.2    Poisson, F.3    Lejeune, B.4    Barin, F.5
  • 39
    • 20744456789 scopus 로고
    • Solid-phase peptide synthesis I. The synthesis of a tetrapeptide
    • Merrifield RB. Solid-phase peptide synthesis I. The synthesis of a tetrapeptide. J Am Chem Soc 1963;85:2149-54.
    • (1963) J Am Chem Soc , vol.85 , pp. 2149-2154
    • Merrifield, R.B.1
  • 40
  • 41
    • 0031033473 scopus 로고    scopus 로고
    • Presence of multiple non-B subtypes and divergent subtype B strains of HIV-1 in individuals infected after overseas deployment
    • Lasky M, Perret JL, Peeters M, et al. Presence of multiple non-B subtypes and divergent subtype B strains of HIV-1 in individuals infected after overseas deployment. AIDS 1997;11:43-51.
    • (1997) AIDS , vol.11 , pp. 43-51
    • Lasky, M.1    Perret, J.L.2    Peeters, M.3
  • 42
    • 0028102110 scopus 로고
    • Reduced rate of disease development after HIV-2 infection as compared to HIV-1
    • Marlink R, Kanki P, Thior I, et al. Reduced rate of disease development after HIV-2 infection as compared to HIV-1. Science 1994; 265:1587-90.
    • (1994) Science , vol.265 , pp. 1587-1590
    • Marlink, R.1    Kanki, P.2    Thior, I.3
  • 43
    • 0026551082 scopus 로고
    • Selective transmission of human immunodeficiency virus type-1 variants from mothers to infants
    • Wolinsky SM, Wike CM, Korber BT, et al. Selective transmission of human immunodeficiency virus type-1 variants from mothers to infants. Science 1992;255:1134-7.
    • (1992) Science , vol.255 , pp. 1134-1137
    • Wolinsky, S.M.1    Wike, C.M.2    Korber, B.T.3
  • 44
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994;22:4673-80.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 45
    • 0028593906 scopus 로고
    • Rapid grouping of HIV-1 infection in subtypes A to E by V3 peptide serotyping and its relation to sequence analysis
    • Sherefa K, Sönnerborg A, Steinbergs J, Sâllberg M. Rapid grouping of HIV-1 infection in subtypes A to E by V3 peptide serotyping and its relation to sequence analysis. Biochem Biophys Res Commun 1994;205:1658-64.
    • (1994) Biochem Biophys Res Commun , vol.205 , pp. 1658-1664
    • Sherefa, K.1    Sönnerborg, A.2    Steinbergs, J.3    Sâllberg, M.4
  • 46
    • 0026356679 scopus 로고
    • Production of site-selected neutralizing human monoclonal antibodies against the third variable domain of the human immunodeficiency virus type 1 envelope glycoprotein
    • Gorny MK, Xu JY, Gianakakos V, et al. Production of site-selected neutralizing human monoclonal antibodies against the third variable domain of the human immunodeficiency virus type 1 envelope glycoprotein. Proc Natl Acad Sci USA 1991;88:3238-42.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 3238-3242
    • Gorny, M.K.1    Xu, J.Y.2    Gianakakos, V.3
  • 47
    • 0026486570 scopus 로고
    • Neutralization of diverse human immunodeficiency virus type 1 variants by an anti-V3 human monoclonal antibody
    • Gorny MK, Conley AJ, Karwoswka S, et al. Neutralization of diverse human immunodeficiency virus type 1 variants by an anti-V3 human monoclonal antibody. J Virol 1992;66:7538-42.
    • (1992) J Virol , vol.66 , pp. 7538-7542
    • Gorny, M.K.1    Conley, A.J.2    Karwoswka, S.3
  • 48
    • 0032030608 scopus 로고    scopus 로고
    • Serotyping of HIV-1 infections: Definition, classification, relationship to viral genetic subtypes and assay evaluation
    • Cheingsong-Popov R, Osmanov S, Pau CP, et al. Serotyping of HIV-1 infections: definition, classification, relationship to viral genetic subtypes and assay evaluation. AIDS Res Hum Retroviruses 1998;14:311-8.
    • (1998) AIDS Res Hum Retroviruses , vol.14 , pp. 311-318
    • Cheingsong-Popov, R.1    Osmanov, S.2    Pau, C.P.3
  • 49
    • 0031883754 scopus 로고    scopus 로고
    • Evaluation of four different V3 loop peptide ELISAs for HIV-1 serotyping in an East African region; a feasible tool for molecular epidemiology?
    • Hoelscher M, Hanker S, Barin F, et al. Evaluation of four different V3 loop peptide ELISAs for HIV-1 serotyping in an East African region; a feasible tool for molecular epidemiology? AIDS Res Hum Retroviruses 1998;14:139-49.
    • (1998) AIDS Res Hum Retroviruses , vol.14 , pp. 139-149
    • Hoelscher, M.1    Hanker, S.2    Barin, F.3
  • 51
    • 0029090498 scopus 로고
    • Determination of HIV-1 subtypes in injecting drugs users in Bangkok, Thailand, using peptide-binding enzyme immunoassay and heteroduplex mobility assay: Evidence of increasing infection with HIV-1 subtype E
    • Wasi C, Herring B, Raktham S, et al. Determination of HIV-1 subtypes in injecting drugs users in Bangkok, Thailand, using peptide-binding enzyme immunoassay and heteroduplex mobility assay: evidence of increasing infection with HIV-1 subtype E. AIDS 1995;9:843-9.
    • (1995) AIDS , vol.9 , pp. 843-849
    • Wasi, C.1    Herring, B.2    Raktham, S.3
  • 52
    • 0030754996 scopus 로고    scopus 로고
    • M serotypes in French blood donors over a 10-year period (1985-1995)
    • M serotypes in French blood donors over a 10-year period (1985-1995). AIDS 1997;11:1503-8.
    • (1997) AIDS , vol.11 , pp. 1503-1508
    • Barin, F.1    Courouce, A.M.2    Pillonel, J.3
  • 53
    • 0030589256 scopus 로고    scopus 로고
    • Presence of HIV-1 subtypes B and F and HTLV-I in HIV/HTLV coinfected individuals of Martinique
    • Desgranges C, Fillon S, Audoly G, et al. Presence of HIV-1 subtypes B and F and HTLV-I in HIV/HTLV coinfected individuals of Martinique. J Acquir Immune Defic Syndr Hum Retrovirol 1996; 13:468-70.
    • (1996) J Acquir Immune Defic Syndr Hum Retrovirol , vol.13 , pp. 468-470
    • Desgranges, C.1    Fillon, S.2    Audoly, G.3
  • 54
    • 0027980445 scopus 로고
    • Mutational trends in V3 loop protein sequences observed in different genetic lineages of human immunodeficiency virus type 1
    • Korber BTM, McInnes K, Smith RF, Myers G. Mutational trends in V3 loop protein sequences observed in different genetic lineages of human immunodeficiency virus type 1. J Virol 1994;68:6730-44.
    • (1994) J Virol , vol.68 , pp. 6730-6744
    • Korber, B.T.M.1    McInnes, K.2    Smith, R.F.3    Myers, G.4
  • 55
    • 0027325038 scopus 로고
    • Crystal structure of a human immunodeficiency virus type 1 neutralizing antibody, 50.1, in complex with its V3 loop peptide antigen
    • Rini JM, Stanfield RL, Stura EA, Salinas PA, Profy AT, Wilson IA. Crystal structure of a human immunodeficiency virus type 1 neutralizing antibody, 50.1, in complex with its V3 loop peptide antigen. Proc Natl Acad Sci USA 1993;90:6325-9.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 6325-6329
    • Rini, J.M.1    Stanfield, R.L.2    Stura, E.A.3    Salinas, P.A.4    Profy, A.T.5    Wilson, I.A.6
  • 56
    • 0021912920 scopus 로고
    • Complete nucleotide sequence of the AIDS virus, HTLV-III
    • Ratner L, Haseltine W, Patarca R, et al. Complete nucleotide sequence of the AIDS virus, HTLV-III. Nature 1985;313:277-84.
    • (1985) Nature , vol.313 , pp. 277-284
    • Ratner, L.1    Haseltine, W.2    Patarca, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.