DnaB from Thermus aquaticus unwinds forked duplex DNA with an asymmetric tail length dependence

Journal of Biological Chemistry

Volumn 274, Issue 11, 1999, Pages 6889-6897

  Kaplan, Daniel L ^a   Steitz, Thomas A ^a,b  

^a YALE UNIVERSITY   (United States)

^b HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; DOUBLE STRANDED DNA; GENE PRODUCT; HELICASE; NUCLEOSIDE TRIPHOSPHATE; SINGLE STRANDED DNA;

ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; DNA STRUCTURE; ENZYME SUBSTRATE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; THERMUS AQUATICUS;

BACTERIAL PROTEINS; BASE SEQUENCE; CLONING, MOLECULAR; DNA HELICASES; DNA PRIMERS; DNA TOPOISOMERASES, TYPE I; DNAB HELICASES; MOLECULAR SEQUENCE DATA; RECOMBINANT PROTEINS; SUBSTRATE SPECIFICITY; THERMUS;

BACTERIA (MICROORGANISMS); THERMUS AQUATICUS; UNIDENTIFIED BACTERIOPHAGE;

EID: 0033548710     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.274.11.6889     Document Type: Article

References (39)

1. Bujalowski, W., Klonowska, M. M., and Jezewska, M. J. (1994) J. Biol. Chem. 269, 31350-31358
2. Martin, M. C. S., Stamford, N. P. J., Dammerova, N., and Dixon, N. E. (1995) J. Struct. Biol. 114, 167-176
3. Yu, X., Jezewska, M. J., Bujalowski, W., and Egelman, E. H. (1996) J. Mol. Biol. 259, 7-14
4. Wechsler, J. A., and Gross, J. D. (1971) Mol. Gen. Genet. 113, 273-284
5. Arai, K.-I., and Kornberg, A. (1979) Proc. Natl. Acad. Sci. U. S. A. 76, 4308-4312
6. Arai, K.-I., and Kornberg, A. (1981) J. Biol. Chem. 256, 5267-5272
7. Kaguni, J. M., and Kornberg, A. (1984) Cell 38, 183-190
8. Baker, T. A., Funnell, B. E., and Kornberg, A. (1987) J. Biol. Chem. 262, 6877-6885
9. Baker, T. A., Sekimizu, K., Funnell, B. E., and Kornberg, A. (1986) Cell 45, 53-64
10. LeBowitz, J. H., and McMacken, R. (1986) J. Biol. Chem. 261, 4738-4748
11. Gorbalenya, A. E., and Koonin, E. V. (1993) Curr. Opin. Struct. Biol. 3, 419-429
12. Ilyina, T. V., Gorbalenya, A. E., and Koonin, E. V. (1992) J. Mol. Evol. 34, 351-357
13. Venkatesan, M., Silver, L. L., and Nossal, N. G. (1982) J. Biol. Chem. 257, 12426-12434
14. Richardson, R. W., and Nossal, N. G. (1989) J. Biol. Chem. 264, 4725-4731
15. Hacker, K. J., and Johnson, K. A. (1997) Biochemistry 36, 14080-14087
16. Matson, S. W., Tabor, S., and Richardson, C. C. (1983) J. Biol. Chem. 258, 14017-14024
17. Ahnert, P., and Patel, S. S. (1997) J. Biol. Chem. 272, 32267-32273
18. Mok, M., and Marians, K. J. (1987) J. Biol. Chem. 262, 16644-16654
19. Wu, C. A., Zechner, E. L., and Marians, K. J. (1992) J. Biol. Chem. 267, 4030-4044
20. Yu, X., Hingorani, M. M., Patel, S. S., and Egelman, E. H. (1996) Nature Struct. Biol. 3, 740-743
21. Egelman, E. H., Yu, X., Wild, R., Hingorani, M. M., and Patel, S. S. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 3869-3873
22. Lawyer, F. C., Stoffel, S., Saiki, R. K., Myambo, K., Drummond, R., and Gelfand, D. H. (1989) J. Biol. Chem. 264, 6427-6437
23. Laemmli, U. K. (1970) Nature 227, 680-685
24. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., Section 18.55, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
25. Dalphin, M. E., Brown, C. M., Stockwell, P. A., and Tate, W. P. (1996) Nucleic Acids Res. 24, 216-218
26. Peterson, M. G., and Tjian, R. (1993) Methods Enzymol. 218, 493-507
27. Silver, J. (1991) in PCR: A Practical Approach (McPherson, M. J., Quirke, P., and Taylor, G. R., eds), pp. 137-146, Oxford University Press, Oxford
28. Studier, F. W., Rosenberg, A. H., Dunn, J. J., and Dubendorff, J. W. (1990) Methods Enzymol. 185, 60-89
29. Chase, J. W., and Williams, K. R. (1986) Annu. Rev. Biochem. 55, 103-136
30. Arai, K.-I., and Kornberg, A. (1981) J. Biol. Chem. 256, 5253-5259
31. Arai, K.-I., and Kornberg, A. (1981) J. Biol. Chem. 256, 5260-5266
32. Lee, E. H., Kornberg, A., Hidaka, M., Kobayashi, T., and Horiuchi, T. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 9104-9108
33. Manna, A. C., Pai, K. S., Bussiere, D. E., Davies, C., White, S. W., and Bastia, D. (1996) Cell 87, 881-891
34. Bujalowski, W., and Jezewska, M. J. (1995) Biochemistry 34, 8513-8519
35. Jezewska, M. J., Rajendran, S., and Bujalowski, W. (1997) Biochemistry 36, 10320-10326
36. Jezewska, M. J., Rajendran, S., and Bujalowski, W. (1998) Biochemistry 37, 3116-3136
37. Jezewska, M. J., Rajendran, S., Bujalowska, D., and Bujalowski, W. (1998) J. Biol. Chem. 273, 10515-10529
38. Lu, Y.-B., Ratnakar, P. V. A. L., Mohanty, B. K., and Bastia, D. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 12902-12907
39. Kusakabe, T., Baradaran, K., Lee, J., and Richardson, C. C. (1998) EMBO J. 17, 1542-1552