Direct determination of changes of interdomain orientation on ligation: Use of the orientational dependence of 15N NMR relaxation in Abl SH(32)

Biochemistry

Volumn 38, Issue 32, 1999, Pages 10225-10230

  Fushman, David ^a   Xu, Rong ^a   Cowburn, David ^a  

^a ROCKEFELLER UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABELSON PROTEIN TYROSINE KINASE; ONCOPROTEIN; PROTEIN; PROTEIN TYROSINE KINASE; UNCLASSIFIED DRUG;

ARTICLE; CRYSTAL STRUCTURE; MACROMOLECULE; MOLECULAR INTERACTION; NUCLEAR MAGNETIC RESONANCE; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION;

AMIDES; ANISOTROPY; HUMANS; LIGANDS; MODELS, MOLECULAR; NITROGEN ISOTOPES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDE FRAGMENTS; PROTO-ONCOGENE PROTEINS C-ABL; SRC HOMOLOGY DOMAINS; THERMODYNAMICS; TIME FACTORS;

EID: 0033543211     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990897g     Document Type: Article

References (49)

1. Tolman, J. R., Flanagan, J. M., Kennedy, M. A., and Prestegard, J. H. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 9279-9283.
2. Bruschweiler, R., Liao, X., and Wright, P. E. (1995) Science 268, 886-889.
3. Broadhurst, R. W., Hardman, C. H., Thomas, J. O., and Laue, E. D. (1995) Biochemistry 34, 16608-16617.
4. Tjandra, N., Garrett, D. S., Gronenborn, A. M., Bax, A., and Clore, G. M. (1997) Nat. Struct. Biol. 4, 443-449.
5. Tjandra, N., and Bax, A. (1997) Science 278, 1111-1114.
6. Tjandra, N., Omichinski, J. G., Gronenborn, A. M., Clore, G. M., and Bax, A. (1997) Nat. Struct. Biol. 4, 732.
7. Clore, G. M., Stanch, M. R., and Gronenborn, A. M. (1998) J. Am. Chem. Soc 120, 10571-10572.
8. Hansen, M. R., Rance, M., and Palmer, A. G. P. (1998) J. Am. Chem. Soc. 120, 11210-11211.
9. Koenig, B. W., Hu, J.-S., Ottiger, M., Bose, S., Hendler, R. W., and Bax, A. (1999) J. Am. Chem. Soc. 121, 1385-1386.
10. Sass, J., Cordier, F., Hoffmann, A., Rogowski, M., Cousin, A., Omichinski, J. G., Löwen, H., and Grzesiek, S. (1999) J. Am. Chem. Soc. 121, 2047-2055.
11. Kuriyan, J., and Cowburn, D. (1997) Annu. Rev. Biophys. Biomol. Struct. 26, 259-288.
12. Sicheri, F., and Kuriyan, J. (1997) Curr. Opin. Struct. Biol. 7, 777-785.
13. Mayer, B. J., Hirai, H., and Sakai, R. (1995) Curr. Biol. 5, 296-305.
14. Campbell, I. D., and Downing, A. K. (1998) Nat. Struct. Biol. 5 (Suppl.), 496-499.
15. Deiningen, M., and Goldman, J. (1998) Curr. Opin. Hematol. 5, 302-308.
16. Nam, H. J., Haser, W. G., Roberts, T. M., and Frederick, C. A. (1996) Structure 4, 1105-1114.
17. Gosser, Y. Q., Zheng, J., Overduin, M., Mayer, B. J., and Cowburn, D. (1995) Structure 3, 1075-1086.
18. Xu, R., Ayers, B., Cowburn, D., and Muir, T. W. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 388-393.
19. Xu, Q., Zheng, J., Xu, R., Barany, G., and Cowburn, D. (1999) Biochemistry 38, 3491-3497.
20. Cowburn, D., Zheng, J., Xu, Q., and Barany, G. (1995) J. Biol. Chem. 270, 26738-26741.
21. Overduin, M., Rios, C., Mayer, B., Baltimore, D., and Cowbum, D. (1992) Cell 70, 697-704.
22. Xu, R., Cahill, S., and Cowburn, D. (1999) J. Biomol. NMR (in press).
23. Fushman, D., Cahill, S., and Cowburn, D. (1997) J. Mol. Biol. 266, 173-194.
24. Fushman, D., and Cowburn, D. (1998) J. Am. Chem. Soc. 120, 7109-7110.
25. Fushman, D., Tjandra, N., and Cowburn, D. (1998) J. Am. Chem. Soc. 120, 10947-10952.
26. Abragam, A. (1961) The Principles of Nuclear Magnetism, Clarendon Press, Oxford.
27. Farrow, N. A., Zhang, O., Szabo, A., Torchia, D. A., and Kay, L. E. (1995) J. Biomol. NMR 6, 153-162.
28. Woessner, D. (1962) J. Chem. Phys. 37, 647-654.
29. Lee, L. K., Rance, M., Chazin, W. J., and Palmer, A. G., III. (1997) J. Biomol. NMR 9, 287-298.
30. Copie, V., Tomita, Y., Akiyama, S. K., Aota, S., Yamada, K. M., Venable, R. M., Pastor, R. W., Krueger, S., and Torchia, D. A. (1998) J. Mol. Biol. 277, 663-682.
31. Fushman, D., and Cowburn, D. (1999) J. Biomol. NMR 13, 139-147.
32. Press, W. H., Teukolsky, S. A., Vetterling, W. T., and Flannery, B. P. (1992) Numerical Recipes in C, Cambridge University Press, New York.
33. Fushman, D., Weisemann, R., Thuring, H., and Ruterjans, H. (1994) J. Biomol. NMR 4, 61-78.
34. Hansen, A. P., Petros, A. M., Meadows, P. P., and Fesik, S. W. (1994) Biochemistry 33, 15418-15424.
35. Musacchio, A., Saraste, M., and Wilmanns, M. (1994) Nat. Struct. Biol. 1, 546-551.
36. Waksman, G., Shoelson, S. E., Pant, N., Cowburn, D., and Kuriyan, J. (1993) Cell 72, 779-790.
37. Lee, C.-H., Kominos, D., Jacques, S., Margolis, B., Schlessinger, J., Shoelson, S. E., and Kuriyan, J. (1994) Structure 2, 423-438.
38. de la Torre, J. G., and Bloomfield, V. A. (1981) Q. Rev. Biophys. 14, 81-139.
39. McDonnell, J. M., Fushman, D., Cahill, S. M., Zhou, W., Wolven, A., Wilson, C. B., Nelle, T. D., Resh, M. D., Wills, J., and Cowburn, D. (1998) J. Mol. Biol. 279, 921-928.
40. Cotton, G. J., Ayers, B., Xu, R., and Muir, T. W. (1999) J. Am. Chem. Soc. 121, 1100-1101.
41. Blackledge, M., Cordier, F., Dosset, P., and Marion, D. (1998) J. Am. Chem. Soc. 120, 4538-4539.
42. Clore, G., Gronenbom, A., and Tjandra, N. (1998) J. Magn. Reson. 131, 159-162.
43. Koenig, S. (1975) Biopolymers 14, 2421-2423.
44. Barbato, G., Ikura, M., Kay, L. E., Pastor, R. W., and Bax, A. (1992) Biochemistry 31, 5269-5278.
45. Pervushin, K., Riek, R., Wider, G., and Wuthrich, K. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 12366-12371.
46. Yamazaki, T., Otomo, T., Oda, N., Kyogoku, Y., Uegaki, K., and Ito, N. (1998) J. Am. Chem. Soc. 120, 5591-5592.
47. Yu, H. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 332-334.
48. Draper, N. R., and Smith, H. (1981) Applied regression analysis, John Wiley and Sons, New York.
49. Clore, G. M., Gronenbom, A. M., Szabo, A., and Tjandra, N. (1998) J. Am. Chem. Soc. 120, 4889-4890.