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PEDF was purified from WERI-Rb-27R (6) serum-free conditioned media by sequential steps consisting of dialysis (molecular mass cutoff, 30 kD) against distilled water, 60 to 95% ammonium sulfate precipitation, step elution from lentil lectin Sepharose 4B (Pharmacia) with 0.5 M α-methyl-D-mannopyranoside, and elution from a HiTrap heparin Sepharose column (Pharmacia) with increasing NaCl gradient. Purification was monitored by an endothelial cell migration assay (26), and the yield was 17.5%. Edman degradation of proteolytically derived internal peptides of the protein yielded two unambiguous sequences (TSLEDFYLDEERTVRVPMMXD and IAQL-PLTGXM) (27). A BLAST protein homology search revealed that PEDF contains identical sequences.
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note
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Human PEDF cDNA was engineered by polymerase chain reaction to encode a COOH-terminal hexa-histidine tag, cloned into pCEP4 (Invitrogen), and transfected into human embryonic kidney cells. Recombinant PEDF was purified from the conditioned media with the Xpress Protein Purification System (Invitrogen).
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23
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0344797123
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See supplemental figures, available at www.sciencemag. org/feature/data/1040070
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24
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0344797122
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note
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For preparation of stromal extract, corneas were freed of associated epithelium and as much of the endothelium as possible, washed extensively in ice-cold phosphate-buffered saline (PBS, pH 7.4), and minced into small fragments that were incubated for 24 hours in PBS containing 0.5 mM phenylmethane-sulfonyl fluoride. The extract was filter sterilized, stored at -80°C, and tested in migration assays at a final concentration of 10 μg of protein per milliliter.
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26
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0345659983
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note
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Migration assays were performed in quadruplicate for each sample with bovine adrenal capillary endothelial cells or human dermal microvascular endothelial cells (Clonetics, San Diego, CA) as described (28). To combine multiple experiments, we first subtracted background migration (Bkgd) toward vehicle (0.1% bovine serum albumin) and then normalized data by setting maximum migration toward inducer alone to 100%. All experiments were repeated two to five times. Statistics were performed on raw data before normalization with the Student's t test. Standard errors were converted to percentages.
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40
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0344365311
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note
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Single-letter abbreviations for the amino acid residues are as follows: A, Ala; D, Asp; E, Glu; F, Phe; G, Gly; I, Ile; L, Leu; M, Met; P, Pro; Q, Gln; R, Arg; S, Ser; T. Thr; V, Val; X, any amino acid; and Y, Tyr.
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42
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0029101802
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PEDF antipeptide antibody (anti-PEDF) was raised in rabbits against a peptide containing PEDF amino acids 327 to 343, conjugated to Keyhole-limpet hemocyanin, and affinity-purified on a peptide column. Polyclonal antisera against bacterial recombinant PEDF/EPC-1 (anti-EPC-1) [B. R. DiPaolo, R. J. Pignolo, V. J. Cristofalo, Exp. Cell Res. 220, 178 (1995)] and the antiangiogenic protein angiostatin [M. S. O'Reilly et al., Cell 79, 315 (1994)] were gifts. Purchased reagents included neutralizing anti-VEGF (Genzyme, Cambridge, MA), pan antibodies to TGFβ, and all angiogenic inducers (R & D Systems, Minneapolis, MN) except lysophosphatidic acid (Sigma). All proteins and antibodies were extensively dialyzed against PBS before use in biological assays.
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DiPaolo, B.R.1
Pignolo, R.J.2
Cristofalo, V.J.3
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43
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0027970092
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PEDF antipeptide antibody (anti-PEDF) was raised in rabbits against a peptide containing PEDF amino acids 327 to 343, conjugated to Keyhole-limpet hemocyanin, and affinity-purified on a peptide column. Polyclonal antisera against bacterial recombinant PEDF/EPC-1 (anti-EPC-1) [B. R. DiPaolo, R. J. Pignolo, V. J. Cristofalo, Exp. Cell Res. 220, 178 (1995)] and the antiangiogenic protein angiostatin [M. S. O'Reilly et al., Cell 79, 315 (1994)] were gifts. Purchased reagents included neutralizing anti-VEGF (Genzyme, Cambridge, MA), pan antibodies to TGFβ, and all angiogenic inducers (R & D Systems, Minneapolis, MN) except lysophosphatidic acid (Sigma). All proteins and antibodies were extensively dialyzed against PBS before use in biological assays.
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O'Reilly, M.S.1
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44
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0345659981
-
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note
-
Human vitreous fluid was withdrawn from three cadaveric eyes (refrigerated within 1.4 to 4.5 hours of death) obtained from individuals without ocular disease. Fluid was frozen until used. Fresh vitreous fluid was obtained from bovine and mouse eyes.
-
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45
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0344797118
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note
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We thank A. Mountz for VEGF measurements; B. Kennedy and the Midwest Eye Banks and Transplantation Center for human eye tissue; M. K. Francis and V. Cristofalo for anti-EPC-1; M. O'Reilly and J. Folkman for bovine capillary endothelial cells and angiostatin; and C Hawkins, R. O'Grady, and Y. Mu for assistance with retinoblastomas. Supported by the National Eye Institute, the Retina Research Foundation, the National Cancer Institute, and the Chicago Baseball Charities.
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