rDNA units are highly polymorphic in Scutellospora castanea (Glomales, Zygomycetes)

Gene

Volumn 226, Issue 1, 1999, Pages 61-71

  Hosny, Michel ^a   Hijri, Mohamed ^a   Passerieux, Emeric ^a   Dulieu, Hubert ^a  

^a CNRS   (France)

Author keywords

Genomic library; RDNA polymorphism; Sequence divergence; Specific primer

Indexed keywords

RIBOSOME DNA;

ARTICLE; DNA POLYMORPHISM; DNA SEQUENCE; NONHUMAN; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RNA GENE; ZYGOMYCETES;

CELL NUCLEUS; CLONING, MOLECULAR; DNA PRIMERS; DNA, RIBOSOMAL; GENE DOSAGE; PHYLOGENY; POLYMORPHISM, GENETIC; SEQUENCE ANALYSIS, DNA; ZYGOMYCOTA;

EID: 0033534774     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(98)00562-9     Document Type: Article

References (30)

1. Bentivenga S.P., Morton J.B. Congruence of fatty acid methyl ester profiles and morphological characters of arbuscular mycorrhizal fungi in Gigasporaceae. Proc. Natl. Acad. Sci. USA. 93:1996;5659-5662.
2. Bollon, A.P., 1982. Organization of fungal ribosomal RNA genes. In: Busch, H., Rothblum, L. (Eds.), The Cell Nucleus. Academic Press, New York, pp. 67-125.
3. Brown D.D., Wensink P.C., Jordan E. A comparison of the ribosomal DNAs of Xenopus laevis and Xenopus mulleri: the evolution of tandem genes. J. Mol. Biol. 63:1972;57-73.
4. Cavalier-Smith, T., 1985. The Evolution of Genome Size. Wiley, New York.
5. Doolittle W.F., Sapienza C. Selfish genes, the phenotype paradigm and genome evolution. Nature. 284:1980;601-603.
6. Garber R.C., Turgeon B.G., Selker E.U., Yoder O.C. Organization of ribosomal RNA genes in the fungus Cochliobolus heterostrophus. Curr. Genet. 14:1988;573-582.
7. Goffeau A., Barrell B.G., Bussey H., Davis R.W., Dujon B., Feldmann H., Galibert F., Hoheisel J.D., Jacq C., Johnston M., Louis E.J., Mewes H.W., Murakami Y., Philippsen P., Tettelin H., Oliver S.G. Life with 6000 genes. Science. 274:1996;546-567.
8. Griffin, D.H., 1992. Chapter 17: Nucleic Acids and Nucleotides. In: Arora, D.L., Elander, R.P., Mukerji, K.G. (Eds.), Handbook of Applied Mycology. Dekker, New York, pp. 445-473.
9. Hosny M., Païs de Barros J.-P., Gianinazzi-Pearson V., Dulieu H. Base composition of DNA from glomalean fungi: High amounts of methylated cytosine. Fun. Genet. Biol. 22:1997;103-111.
10. Hosny M., Gianinazzi-Pearson V., Dulieu H. Nuclear DNA contents of 11 fungal species in Glomales. Genome. 41(3):1998;422-428.
11. Morton J.B. Species and clones of arbuscular mycorrhizal fungi (Glomales, Zygomycetes): their role in macro- and micro-evolutionary processes. Mycotaxon. 37:1990;493-515.
12. Morton J.B., Benny G.L. Revised classification of arbuscular mycorrhizal fungi (Zygomycetes): a new order, Glomales, two new suborders, Glomineae and Gigasporineae, and two new families, Acaulosporaceae and Gigasporaceae, with an emendation of Glomaceae. Mycotaxon. 37:1990;471-491.
13. Nei, M., 1987. Molecular Evolutionary Genetics, New York.
14. Pirozynski K.A., Malloch D.W. The origin of land plants: a matter of mycotropism. BioSystems. 6:1975;153-164.
15. Remy W., Taylor T.N., Hass H., Kerp H. Four hundred-million-year-old vesicular arbuscular mycorrhizae. Proc. Natl. Acad. Sci. USA. 91:1994;11841-11843.
16. Rivin C.J., Cullis C.A., Walbot V. Evaluating quantitative variation in the genome of Zea mays. Genetics. 113:1986;1009-1019.
17. ™. Mol. Ecol. 6:1997;821-829.
18. Sambrook, J., Fritsch, E.F., Maniatis, T., 1989. Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
19. Sanders I.R., Alt M., Groppe K., Boller T., Wiemken A. Identification of ribosomal DNA polymorphisms among and within spores of the Glomales: application to studies on the genetic diversity of arbuscular mycorrhizal fungal communities. New Phytol. 130:1995;419-427.
20. Simon L., Lalonde M., Bruns T.D. Specific amplification of the 18S fungal ribosomal genes from vesicular-arbuscular endomycorrhizal fungi colonizing roots. Appl. Envir. Microbiol. 58:1992;291-295.
21. Smith G.P. Evolution of repeated DNA sequences by unequal crossover. Science. 141:1976;528-534.
22. Solignac, M., Periquet, G., Anxolabéhère, D., Petit, C., 1995. L'espèce, l'évolution moléculaire. In: Génétique et Evolution. Hermann, Paris.
23. Tommerup I.C., Sivasithamparam K. Zygospores and asexual spores of Gigaspora decipiens, an arbuscular-mycorrhizal fungus. Mycol. Res. 94:1990;897-900.
24. van Heerikhuizen H., Ykema A., Klootwijk J., Gaillardin C., Ballas C., Fournier P. Heterogeneity in the ribosomal RNA genes of the yeast Yarrowia lipolytica; cloning and analysis of two size classes of repeats. Gene. 39:1985;213-222.
25. van Tuinen, D., Dulieu, H., Zézé, A., Gianinazzi-Pearson, V., 1994. Biodiversity and characterization of arbuscular mycorrhizal fungi at the molecular level. In: Gianinazzi, S., Schüepp, H. (Eds.), Impact of Arbuscular Mycorrhizas on Sustainable Agriculture and Natural Ecosystems. Birkhäuser, Basel, pp. 13-23.
26. van Tuinen, D., Zaho, B., Gianinazzi-Pearson, V., 1998. PCR studies of AMF fungi: from Primers to Application. In: Varma (Ed.), Mycorrhiza Manual. Springer, Heidelberg, pp. 387-399.
27. Wöstemeyer J. Strain-dependent variation in ribosomal DNA arrangement in Absidia glauca. Eur. J. Biochem. 146:1985;443-448.
28. Wöstemeyer J., Burmester A. Structural organization of the genome of the zygomycete Absidia glauca: evidence for high repetitive DNA content. Curr. Genet. 10:1986;903-907.
29. Wöstemeyer J., Burmester A. Dimorphism of rDNA organization in mating types of the zygomycete Absidia glauca. Microbiol. Res. 149:1994;407-411.
30. Zézé A., Hosny M., Gianinazzi-Pearson V., Dulieu H. Characterization of a highly repeated DNA sequence (SC1) from the arbuscular mycorrhizal fungus Scutellospora castanea and its detection in planta. Appl. Envir. Microbiol. 62:1996;2443-2448.