Structure of the SHV-1 β-lactamase

Biochemistry

Volumn 38, Issue 18, 1999, Pages 5720-5727

  Kuzin, Alexandre P ^a   Nukaga, Michiyoshi ^a,c   Nukaga, Yasuko ^a   Hujer, Andrea M ^b   Bonomo, Robert A ^b   Knox, James R ^a  

^a UNIVERSITY OF CONNECTICUT   (United States)

^b LOUIS STOKES CLEVELAND VA MEDICAL CENTER   (United States)

^c CHIBA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BETA LACTAMASE;

ALPHA HELIX; ARTICLE; BINDING AFFINITY; CRYSTAL STRUCTURE; ENZYME ANALYSIS; ENZYME STRUCTURE; KLEBSIELLA PNEUMONIAE; NONHUMAN; PRIORITY JOURNAL; PROTEIN INTERACTION; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; BETA-LACTAMASES; BINDING SITES; CRYSTALLIZATION; DETERGENTS; KLEBSIELLA PNEUMONIAE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; PROTEIN STRUCTURE, SECONDARY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 0033522376     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990136d     Document Type: Article

References (44)

1. Frere, J.-M. (1995) Mol. Microbiol. 16, 385-395.
2. Medeiros, A. A. (1997) Clin. Infect. Dis. 24 (Suppl. 1), S19-S45.
3. Massova, I., and Mobashery, S. (1998) Antimicrob. Agents Chemother. 42, 1-17.
4. Joris, B., Ledent, P., Dideberg, O., Fonze, E., Lamotte-Brasseur, J., Kelly, J. A., Ghuysen, J.-M., and Frere, J.-M. (1991) Antimicrob. Agents Chemother. 35, 2294-2301.
5. Bush, K., Jacoby, G. A., and Medeiros, A. A. (1995) Antimicrob. Agents Chemother. 39, 1211-1233.
6. Jacoby, G. A., and Medeiros, A. A. (1991) Antimicrob. Agents Chemother. 35, 1697-1704.
7. Bonomo, R. A., Currie-McCumber, C., and Shlaes, D. M. (1992) FEMS Microbiol. Lett. 92, 79-82.
8. Zhou, X. Y., Bordon, F., Sirot, D., Kitzis, M.-D., and Gutmann, L. (1994) Antimicrob. Agents Chemother. 38, 1085-1089.
9. Bush, K., and Jacoby, G. (1997) J. Antimicrob. Chemother. 39, 1-3. For listing of all variants, see www.lahey.org/studies/ webt.htm.
10. Knox, J. R., Zorsky, P. E., and Murthy, N. S. (1973) J. Mol. Biol. 79, 597-598.
11. Strynadka, N. C. J., Adachi, H., Jensen, S. E., Johns, K., Sielecki, A., Betzel, C., Sutoh, K., and James, M. N. G. (1992) Nature 359, 700-705.
12. Jelsch, C., Mourey, L., Masson, J.-M., and Samama, J.-P. (1993) Proteins: Struct., Funct., Genet. 16, 364-383.
13. Fonze, E., Charlier, P., Tóth, Y., Vermeire, M., Raquet, X., Dubus, A., and Frere, J.-M. (1995) Acta Crystallogr. D51, 682-694.
14. Johnson, B. H., and Hecht, M. H. (1994) Biotechnology 12, 1357-1360.
15. Lin, S., Thomas, M., Shlaes, D. M., Rudin, S. D., Knox, J. R., Anderson, V., and Bonomo, R. A. (1998) Biochem. J. 333, 395-400.
16. Navaza, J. (1994) Acta Crystallogr. A50, 157-163.
17. Sack, J. S. (1988) J. Mol. Graphics 6, 224-225.
18. Brunger, A. T. (1992) X-PLOR: A system for X-ray crystallography and NMR, Version 3.1, Yale University Press, New Haven, CT.
19. Brunger, A. T. (1992) Nature 355, 472-475.
20. Herzberg, O., and Moult, J. (1991) Proteins: Struct., Funct., Genet. 11, 223-229.
21. Knox, J. R., and Moews, P. C. (1991) J. Mol. Biol. 220, 435-455.
22. Lamotte-Brasseur, J., Dive, G., Dideberg, O., Charlier, P., Frere, J.-M., and Ghuysen, J.-M. (1991) Biochem. J. 279, 213-221.
23. Zafaralla, G., Manavathu, E. K., Lerner, S. A., and Mobashery, S. (1992) Biochemistry 31, 3847-3852.
24. Matagne, A., Lamotte-Brasseur, J., and Frere, J.-M. (1998) Biochem. J. 330, 581-598.
25. Petrosino, J., Rudgers, G., Gilbert, H., and Palzkill, T. (1999) J. Biol. Chem. 274, 2394-2400.
26. Knox, J. R., Moews, P. C., and Frere, J.-M. (1996) Chem. Biol. 3, 937-947.
27. Petit, A., Maveyraud, L., Lenfant, F., Samama, J.-P., Labia, R., and Masson, J.-M. (1995) Biochem. J. 305, 33-40.
28. Knox, J. R. (1995) Antimicrob. Agents Chemother. 39, 2593-2601.
29. Lee, K.-Y., Hopkins, J. D., O'Brien, T. F., and Syvanen, M. (1991) Proteins: Struct., Fund., Genet. 11, 45-51.
30. Huletsky, A., Knox, J. R., and Levesque, R. C. (1993) J. Biol. Chem. 268, 3690-3697.
31. Raquet, X., Lamotte-Brasseur, J., Fonze, E., Goussard, S., Courvalin, P., and Frere, J.-M. (1994) J. Mol. Biol. 244, 625-639.
32. Cantu, C., and Palzkill, T. (1998) J. Biol. Chem. 273, 26603-26609.
33. Venkatachalam, K. V., Huang, W., LaRocco, M., and Palzkill, T. (1994) J. Biol. Chem. 269, 23444-23450.
34. Herzberg, O., Kapadia, G., Blanco, B., Smith, T. S., and Coulson, A. (1991) Biochemistry 30, 9503-9508.
35. Lobkovsky, E., Moews, P. C., Liu, H., Zhao, H., Frere, J.-M., and Knox, J. R. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 11257-11261.
36. Banerjee, S., Pieper, U., Kapadia, G., Pannell, L. K., and Herzberg, O. (1998) Biochemistry 37, 3286-3296.
37. Herzberg, O. (1991) J. Mol. Biol. 217, 701-719.
38. Strynadka, N. C. J., Jensen, S. E., Johns, K., Blanchard, H., Page, M., Matagne, A., Frere, J.-M., and James, M. N. G. (1994) Nature 368, 657-660.
39. Albeck, S., and Schreiber, G. (1999) Biochemistry 38, 11-21.
40. Strynadka, N. C. J., Jensen, S. E., Alzari, P. M., and James, M. N. G. (1996) Nat. Struct. Biol. 3, 290-297.
41. Ambler, R. P., Frere, J.-M., Ghuysen, J.-M., Joris, B., Levesque, R. C., Tiraby, G., Waley, S. G., and Coulson, A. F. W. (1991) Biochem. J. 276, 269-272.
42. Jones, T. A. (1985) Methods Enzymol. 115, 157-170.
43. Kraulis, P. (1991) J. Appl. Crystallogr. 24, 946-950.
44. Imtiaz, U., Billings, E. M., Knox, J. R., Manavathu, E. K., Lerner, S. A., and Mobashery, S. (1993) J. Am. Chem. Soc. 115, 4435-4442.