A novel A-isoform-like inositol 1,4,5-trisphosphate 3-kinase from chicken erythrocytes exhibits alternative splicing and conservation of intron positions between vertebrates and invertebrates

Gene

Volumn 228, Issue 1-2, 1999, Pages 61-71

  Bertsch, Uwe ^a   Haefs, Michael ^b   Möller, Marcus ^a   Deschermeier, Christina ^a   Fanick, Werner ^a   Kitzerow, Annette ^b   Ozaki, Shoichiro ^c   Meyer, Helmut E ^b   Mayr, Georg W ^a  

^a UNIVERSITY MEDICAL CENTER HAMBURG EPPENDORF   (Germany)

^b RUHR UNIVERSITY BOCHUM   (Germany)

^c UNIVERSITY OF UTAH SCHOOL OF MEDICINE   (United States)

Author keywords

cDNA; CR1 repeat; Inositol phosphate metabolism; Molecular cloning; Second messenger

Indexed keywords

CONTIG; INOSITOL TRISPHOSPHATE 3 KINASE;

ALTERNATIVE RNA SPLICING; ANIMAL CELL; ARTICLE; DNA LIBRARY; ERYTHROCYTE MEMBRANE; GENETIC CONSERVATION; INTRON; INVERTEBRATE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOSPHATE METABOLISM; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SECOND MESSENGER; VERTEBRATE;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CHICKENS; CLONING, MOLECULAR; CONSERVED SEQUENCE; DNA, COMPLEMENTARY; DNA, RECOMBINANT; ERYTHROCYTES; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENES; GENOMIC LIBRARY; INTRONS; INVERTEBRATES; ISOENZYMES; MOLECULAR SEQUENCE DATA; PHOSPHOTRANSFERASES (ALCOHOL GROUP ACCEPTOR); SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; VERTEBRATES;

ANIMALIA; AVES; CAENORHABDITIS ELEGANS; GALLUS GALLUS; INVERTEBRATA; VERTEBRATA;

EID: 0033522236     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(99)00018-9     Document Type: Article

References (31)

1. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding. Anal. Biochem. 72:1976;248-254.
2. Choi K.Y., Kim H.K., Lee S.Y., Moon K.H., Sim S.S., Kim J.W., Chung H.K., Rhee S.G. Molecular cloning and expression of a complementary DNA for inositol 1,4,5-trisphosphate 3-kinase. Science. 248:1990;64-66.
3. Clandinin T., DeModena J., Sternberg P. Inositol trisphosphate mediates a RAS-independent response to LET-23 receptor tyrosine kinase activation in C. elegans. Cell. 92:1998;523-533.
4. Communi D., Takazawa K., Erneux C. Lys-197 and Asp-414 are critical residues for binding of ATP/Mg2+ by rat brain inositol 1,4,5-trisphosphate 3-kinase. Biochem. J. 291:1993;811-816.
5. Drayer A.L., Pesesse X., DeSmedt F., Communi D., Moreau C., Emeux C. The family of inositol and phosphatidylinositol polyphosphate 5-phosphatases. Biochem. Soc. Trans. 24:1996;1001-1005.
6. Erneux C., Moreau C., Vandermeers A., Takazawa K. Interaction of calmodulin with a putative calmodulin-binding domain of inositol 1,4,5-triphosphate 3-kinase. Effects of synthetic peptides and site-directed mutagenesis of Trp165. Eur. J. Biochem. 214:1993;497-501.
7. Feinberg A.P., Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132:1983;6-13.
8. Fukuda M., Mikoshiba K. The function of inositol high polyphosphate binding proteins. BioEssays. 19:1997;593-603.
9. Gubler U., Hoffmann B.J. A simple and very efficient method for generating cDNA libraries. Gene. 25:1983;263-269.
10. Gutfreund H. Enzymes: Physical Principles. 1971;Wiley, London.
11. Haas N.B., Grabowski J.M., Sivitz A.B., Burch J.B. Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames. Gene. 197:1997;305-309.
12. Isaaks R.E., Harkness D.R. Erythrocyte organic phosphates and hemoglobin function in birds, reptiles, and fishes. Am. Zoologist. 20:1980;115-129.
13. Kingston R.E. CsCl purification of RNA from tissue. Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., Struhl K. Current Protocols in Molecular Biology. 1996;4.2.5-4.2.9 Wiley, New York.
14. Kozak M. An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res. 15:1987;8125-8148.
15. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227:1970;680-685.
16. Lockett T. A bacteriophage lambda DNA purification procedure suitable for the analysis of DNA from either large or multiple small lysates. Anal. Biochem. 185:1990;230-234.
17. Mayr G.W. Mass determination of inositol phosphates by high-performance liquid chromatography with postcolumn complexometry (metal-dye detection). Irvine R.F. Methods in Inositide Research. 1990;83-108 Raven Press, New York.
18. Mayr G.W., Heilmeyer L.M. Shape and substructure of skeletal muscle myosin light chain kinase. Biochemistry. 22:1983;4316-4326.
19. Merril C., Dunau M., Goldman D. A rapid sensitive silver stain for polypeptides in polyacrylamide gels. Anal. Biochem. 110:1981;201-207.
20. Morris A.J., Downes C.P., Harden T.K., Michell R.H. Turkey erythrocytes possess a membrane-associated inositol 1,4,5-trisphosphate 3-kinase that is activated by Ca2+ in the presence of calmodulin. Biochem. J. 248:1987;489-493.
21. Radenberg T., Scholz P., Bergmann G., Mayr G. The quantitative spectrum of inositol phosphate metabolites in avian erythrocytes analysed by proton n.m.r. and h.p.l.c. with direct isomer detection. Biochem. J. 264:(2):1989;323-333.
22. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual. 2nd edition :1989;Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
23. Shin Y.S., Choi G., Hoi K.Y. Overexpression, purification and characterization of inositol 1,4,5-trisphosphate 3-kinase from rat brain. Mol. Cells. 5:1995;348-353.
24. Studier F.W., Moffatt B.A. Use of bacteriophage T7 RNA-polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol. 189:1986;113-130.
25. Takazawa K., Erneux C. Identification of residues essential for catalysis and binding of calmodulin in rat brain inositol 1,4,5-trisphosphate 3-kinase. Biochem. J. 280:1991;125-129.
26. Takazawa K., VanDekerckhove J., DuMont J.E., Erneux C. Cloning and expression in Escherichia coli of a rat brain cDNA encoding a Ca2+/calmodulin-sensitive inositol 1,4,5-trisphosphate 3-kinase. Biochem. J. 272:1990;107-112.
27. Takazawa K., Perret J., DuMont J.E., Erneux C. Molecular cloning and expression of a human brain inositol 1,4,5-trisphosphate 3-kinase. Biochem. Biophys. Res. Commun. 174:1991;529-535.
28. Takazawa K., Perret J., DuMont J.E., Erneux C. Molecular cloning and expression of a new putative inositol 1,4,5-trisphosphate 3-kinase isoenzyme. Biochem. J. 278:1991;883-886.
29. Thomas S., Brake B., Luzio J.P., Stanley K., Banting G. Isolation and sequence of a full-length cDNA encoding a novel inositol 1,4,5-trisphosphate 3-kinase. Biochim. Biophys. Acta. 1220:1994;219-222.
30. Togashi S., Takazawa K., Endo T., Erneux C., Onaya T. Structural identification of the myo-inositol 1,4,5-trisphosphate-binding domain in rat brain inositol 1,4,5-trisphosphate 3-kinase. Biochem. J. 326:1997;221-225.
31. VanWeyenberg V., Communi D., D'Santos C.S., Erneux C. Tissue- and cell-specific expression of Ins(1,4,5)P3 3-kinase isoenzymes. Biochem. J. 306:1995;429-435.