Indications of relationships between poriferan classes using full-length 18S rRNA gene sequences

Memoirs of the Queensland Museum

Volumn 44, Issue 1-2, 1999, Pages 33-43

  Adams, Christi L ^a   McInerney, James O ^b   Kelly, Michelle ^b,c  

^a QUEENSLAND MUSEUM   (Australia)

^b DEPARTMENT OF LIFE SCIENCES   (United Kingdom)

^c NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH   (New Zealand)

Author keywords

18S rRNA; Calcarea; Demospongiae; Evolution; Hexactinellida; Molecular phylogeny; Porifera

Indexed keywords

DIPLOBLAST; GENE SEQUENCING; MONOPHYLY; PARAPHYLY; PHYLOGENY; POLYPHYLY; RIBOSOMAL RNA; SPONGE;

EVOLUTION; PHYLOGENETICS; TAXONOMY;

CALCAREA; HEXACTINELLIDA; PORIFERA;

EID: 0033513102     PISSN: 00798835     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (48)

1. AX, P. 1996. Multicellular animals: A new approach to the phylogenetic order in nature. (Springer-Verlag: New York).
2. BALDAUF, S.L. & PALMER, J.D. 1993. Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proceedings of the National Academy of Science USA 90: 11558-11562.
3. BERGQUIST, P.R. 1978. Sponges. (Hutchinson: London).
4. BÖGER, H. 1988. Versuch über das phylogenetische system der Porifera. Meyniana 40: 143-154.
5. BORCHIELLINI, C., BOURY-ESNAULT, N., VACELET, J. & LE PARCO, Y. 1998. Phylogenetic analysis of the Hsp70 sequences reveals the monophyly of metazoa and specific phylogenetic relationships between animals and fungi. Molecular Biology and Evolution 15(6): 647-655.
6. BOROJEVIC, R., BOURY-ESNAULT, N. & VACELET, J. 1990. A revision of the supraspecific classification of the subclass Calcinea (Porifera, class Calcarea). Bulletin of the Museum of Natural History, Paris (4) 12(2): 243-276.
7. CAVALIER-SMITH, T., ALLSOPP, M., CHAO, E., BOURY-ESNAULT, N. & VACELET, J. 1996. Sponge phylogeny, animal monophyly, and the origin of the nervous system: 18S rRNA evidence. Canadian Journal of Zoology 74: 2031-2045.
8. CHOMBARD, C., BOURY-ESNAULT, N., TILLIER, A. & VACELET, J. 1997. Polyphyly of "Sclerosponges" (Porifera, Demospongiae) supported by 28S ribosomal sequences. Biological Bulletin 193: 359-367.
9. DENDY, A. & ROW, R.W.H. 1913. The classification and phylogeny of the calcareous sponges; with a reference list of all the described species, systematically arranged. Proceedings of the Zoological Society of London (1913): 704-813.
10. FELSENSTEIN, J. 1984. Distance methods inferring phylogenies: a justification. Evolution 38:16-24.
11. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
12. FINKS, R.M. 1970. The evolution and ecological history of sponges during Paleozoic times. Pp. 3-22. In Fry, W.G. (ed.) Biology of the Porifera. Symposium of Zoological Society of London. No. 25. (Academic Press: London).
13. GOLDMAN, N. 1993. Statistical tests of models of DNA substitution. Journal of Molecular Evolution 36: 182-198.
14. HILLIS, D.M. 1996. Inferring complex phylogenies. Nature 12 (383, 6596): 130-131.
15. HOOPER, J.N.A. 1996. Revision of Microcionidae (Porifera: Poecilosclerida: Demospongiae), with description of Australian species. Memoirs of the Queensland Museum 40: 1-626.
16. JUKES, T.H. & CANTOR, C.R. 1969. Evolution of protein molecules. Pp. 21-132. In Munro H.N. (ed.) Mammalian Protein Metabolism. (Academic Press: New York).
17. KASHINO, H. & HASEGAWA, M. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea. Journal of Molecular Evolution 29: 170-179.
18. KELLY-BORGES, M., BERGQUIST, P.R. & BERGQUIST, P. 1991. Phylogenetic relationships within the order Hadromerida (Porifera, Demospongiae, Tetractinomorpha) as indicated by ribosomal RNA sequence comparisons. Biochemical Systematics and Ecology 19(2): 117-125.
19. KELLY-BORGES, M. & POMPONI, S. 1994. Phylogeny and classification of lithistid sponges (Porifera: Demospongiae): a preliminary assessment using ribosomal DNA sequence comparisons. Molecular Marine Biology and Biotechnology 3(2): 87-103.
20. KELLY-BORGES, M. & VACELET, J. 1995. A revision of Diacarnus Burton and Negombata de Laubenfels (Demospongiae: Latrunculidae) with descriptions of new species from the west central Pacific and the Red Sea. Memoirs of the Queensland Museum 38(2): 477-503.
21. KOBAYASHI, M., TAKAHASHI, M., WADA, H. & SATOH, N. 1993. Molecular phylogeny inferred from sequences of small subunit ribosomal DNA, supports the monophyly of the metazoa. Zoological Science 10: 827-833.
22. KOZIOL, C., LEYS, S.P., MÜLLER, I.M. & MÜLLER, W.E.G. 1997. Cloning of Hsp70 genes from the marine sponges Sycon raphanus (Calcarea) and Rhabdocalyptus dawsoni (Hexactinellida). An approach to solve the phylogeny of sponges. Biological Journal of the Linnean Society 62: 581-592.
23. KRUSE, M., LEYS, S.P., MÜLLER, I.M. & MÜLLER, W.E.G. 1998. Phylogenetic position of the Hexactinellida within the Phylum Porifera based on the amino acid sequence of the Protein Kinase C from Rhabdocalyptus dawsoni. Journal of Molecular Evolution 46: 721-728.
24. LAFAY, B., BOURY-ESNAULT, N., VACELET, J. & CHRISTEN, R. 1992. An analysis of partial 28S ribosomal RNA sequences suggests early radiations of sponges. BioSystems 28: 139-151.
25. LEDGER, P. & JONES, W.C. 1977. Spicule formation in the calcareous sponge Sycon ciliatum. Cell and Tissue Research 181: 553-567.
26. LI, C.-W., CHEN, J.-Y. & HUA, T.-E. 1998. Precambrian sponges with cellular structures. Science 279: 879-882.
27. MACKIE, G. & SINGULA, C. 1983. Studies on hexactinellid sponges. I. Histology of Rhabdocalyptus dawsoni (Lambe, 1873). Philosophical Transactions of the Royal Society (London) 301: 365-400.
28. MADISON, W.P. & MADISON, D.R. 1992. MacClade. Version 3.0 (Sinauer Associates: Sunderland).
29. MAIDAK, B., OLSEN, J., LARSEN, N., OVERBEEK, R., MCCAUGHEY, M. & WOESE, C. 1996. The Ribosomal Database Project (RDP). Nucleic Acids Research 24(1): 82-85.
30. McINERNEY, J.O., ADAMS, C.L., BORGES, K.D. & KELLY-BORGES, M. (in press) Phylogenetic resolution within the Phylum Porifera utilising 18S and 28S rRN A genes. Molecular Phylogeny and Evolution.
31. MÖHN, E. 1984. System und phylongenie der lebewesen Bd-1 Physikalische, chemische und biologische evolution, Prokaryota, Eukaryota (bis Ctenophora). (Schweizerbart: Stuttgart).
32. MÖHN, E. 1984. System und phylongenie der lebewesen Bd-1 Physikalische, chemische und biologische evolution, Prokaryota, Eukaryota (bis Ctenophora). (Schweizerbart: Stuttgart).
33. REISWIG, H.M. & MACKIE, G.O. 1983. Studies on hexactinellid sponges. III. The taxonomic status of Hexactinellida within the Porifera. Philosophical Transactions of the Royal Society of London, B Biological Science 304:419-428.
34. REITNER, J. 1992. 'Corraline Spongien'. Der versuch einer phylogenetisch-taxonomischen analyse. Berliner Geowissenschaftliche Abhandlungen (E) 1: 1-352.
35. REITNER, J. & MEHL, D. 1996. Monophyly of the Porifera. Verhandlungen der naturwissenschaftlicht der Hamburg 36: 5-32.
36. RODRIGO, A., BERGQUIST, P.R. & BERGQUIST, P. 1994. Inadequate support for an evolutionary link between the metazoa and the fungi. Systematic Biology 43(4): 578-584.
37. SAMBROOK, J., FRISCHT, E. & MANIATIS, T. 1989. Molecular cloning: A laboratory manual. (Cold Spring Harbor Laboratory Press: Cold Spring Harbor).
38. SANGER, F., NICKLEN, S. & COULSEN, A. 1977. DNA sequencing with chain termination inhibitors. Proceedings of the National Academy of Science USA 74: 5463-5467.
39. SMITH, S.W., OVERBEEK, R., WOESE, C.R., GILBERT, W. & GILLEVET, P.M. 1994. The Genetic Data Environment: an expandable guide for multiple sequence-analysis. Computer Applications in the Biosciences 10: 671-675.
40. SOEST, R.W.M. VAN 1987. Phylogenetic exercises with monophyletic groups of sponges Pp. 227-241. In Vacelet, J. & Boury-Esnault, N. (eds) Taxonomy of Porifera. NATO ASI Series. Vol. G13. (Springer-Verlag: Berlin).
41. SOEST, R.W.M. VAN, DIAZ, M.C. & POMPONI, S.A. 1990. Phylogenetic classification of the Halichondrida (Porifera, Demospongiae). Beaufortia 40: 15-62.
42. SWOFFORD, D.L., OLSEN, G.J., WADDELL, P.J. & HILLIS, D.M.. 1997. Phylogenetic inference. Pp. 407-514. In Hillis, D.M., Moritz, C. & Mable, B.K. (eds) Molecular Systematics. 2nd Edition. (Sinauer Associates: Sunderland).
43. SWOFFORD, D.L. (in press). PAUP*: Phylogenetic Analysis Using Parsimony (and other methods). Version 4.0. (Sinauer Press: Massachusetts).
44. TOPSENT, E. 1922. Les mégasclères polytylotes des Monaxonides et la parenté des Latrunculiines. Bulletin de l' Institut Océanographique de Monaco 415: 1-8.
45. VACELET, J. 1985. Coralline sponges and the evolution of the Porifera. Pp. 1-13. In Morris, S.C., George, J.D., Gibson, R. & Platt, H.M. (eds) The origins and relationships of lower invertebrates. (Clarendon Press: Oxford).
46. WAINRIGHT, P.O., HINKLE, G., SOGIN, M.L. & STICKEL, S.K. 1993. Monophyletic origins of the Metazoa: an evolutionary link with fungi. Science 260: 340-342.
47. WEST, L. & POWERS, D. 1993. Molecular phylogenetic position of hexactinellid sponges in relation to the Protista and Demospongiae. Molecular Marine Biology and Technology 2: 71-75.
48. ZHARKIKH, A. & LI, W.-H. 1992. Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. II. Four taxa without a molecular clock. Journal of Molecular Evolution 35: 356-366.