Phylogeny of Bursaphelenchus species derived from analysis of ribosomal internal transcribed spacer DNA sequences

Nematology

Volumn 1, Issue 5, 1999, Pages 539-548

  Beckenbach, Karen ^a   Blaxter, Mark ^b   Webster, John M ^a  

^a SIMON FRASER UNIVERSITY   (Canada)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

Aphelenchoides rhytium; B. mucronatus; B. xylophilus; Pinewood nematode

Indexed keywords

BURSAPHELENCHUS; GENE STRUCTURE; GENETIC DIVERSITY; GENETIC MARKER; PHYLOGENY; RIBOSOMAL DNA; RIBOSOMAL RNA; SPACER DNA; SPECIES DIFFERENCE;

FORESTRY; NEMATODE; PEST SPECIES; PHYLOGENY;

BURSAPHELENCHUS MUCRONATUS; BURSAPHELENCHUS XYLOPHILUS;

EID: 0033510224     PISSN: 13885545     EISSN: None     Source Type: Journal    
DOI: 10.1163/156854199508531     Document Type: Article

References (32)

1. ABAD, P.S., TARES, S., BRUGUIER, N. & DE GUIRAN, G. (1991). Characterization of the relationships in the pinewood nernatode species complex (PWNSC) (Bursaphelenchus spp.) using a heterologous unc-22 DNA probe from Caenorhabditis elegans. Parasitology 102, 303-308.
2. ADAMS, B.J., BURNELL, A.M. & POWERS, T.O. (1998). A phylogenetic analysis of the genus Heterorhabditis (Nemata: Rhabditidae) based on internal transcribed spacer 1 DNA sequence data. Journal of Nematology 30, 22-39.
3. ALESHIN, V.V., KEDROVA, O.S., MILYUTINA, I.A., VLADYCHENSKAYA, N.S. & PETROV, N.B. (1998). Intrarelationships of nematodes based on the analysis of 18S rRNA gene sequences: molecular evidence for a monophyly of chromadorian and secernentean nematodes. Russian Journal of Nematology 6, 175-184.
4. BECKENBACH, K., SMITH, M.J. & WEBSTER, J.M. (1992). Taxonomic affinities and intra- and inter-specific variation in Bursaphelenchus spp. as determined by the polymerase chain reaction. Journal of Nematology 24, 140-147.
5. BLAXTER, M.L., DE LEY, P., GAREY, J., LIU, L.X., SCHELDEMAN, P., VIERSTRAETE, A., VANFLETEREN, J., MACKEY, L.Y., DORRIS, M., FRISSE, L.M., VIDA, J.T. & THOMAS, W.K. (1998). A molecular evolutionary framework for the phylum Nematoda. Nature 392, 71-75.
6. CHERRY, T.A., SZALANSKI, A.L., TODD, T.C. & POWERS, T.O. (1997). The internal transcribed spacer region of Belonolaimus (Nemata: Belonolaimidae). Journal of Nematology 29, 23-29.
7. CHILTON, N.B., GASSER, R.B. & BEVERIDGE, I. (1997a). Phylogenetic relationships of Australian strongyloid nematodes inferred from ribosomal DNA sequence data. International Journal for Parasitology 27, 1481-1494.
8. CHILTON, N.L.B., HOSTE, H., HUNG, G.-C., BEVERIDGE, I. & GASSER, R.B. (1997b). The 5.8S rDNA sequences of 18 species of bursate nematodes (order Strongylida): Comparison with Rhabditid and Tylenchid nematodes. International Journal for Parasitology 27, 119-124.
9. DE GUIRAN, G. & BOULBRIA, A. (1986). Le nématode des pins. Caractéristiques de la souche française et risque d'introduction et d'extension de Bursaphelenchus xylophilus en Europe. EPPO Bulletin 16, 445-452.
10. DE GUIRAN, G. & BRUGUIER, N. (1989). Hybridisation and phylogeny of pinewood nematode (Bursaphelenchus spp.). Nematologica 34, 321-330.
11. ELLIS, R.E., SULSTON, J.E. & COULSON, A.R. (1986). The rDNA of C. elegans: sequence and structure. Nucleic Acids Research 14, 2345-2364.
12. HENIKOFF, S. (1984). Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28, 321-330.
13. HESCHL, M.F.P. & BAILLIE, D.L. (1989). Characterisation of the hsp70 multigene family of Caenorhabditis elegans. DNA 8, 233-243.
14. IWAHORI, H., TSUDA, K., KANZAKI, N., IZUI, K. & FUTAI, K. (1998). PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease. Fundamental and Applied Nematology 21, 655-666.
15. KAMPFER, S., STURMBAUER, C. & OTT, C.J. (1998). Phylogenetic anlysis of rDNA sequences from adenophorean nematodes and implications for the Adenophorea-Secernetea controversy. Invertebrate Biology 117, 29-36.
16. MAMIYA, Y. & ENDA, N. (1979). Bursaphelenchus mucronatus n. sp. (Nematoda: Aphelenchoididae) from pine wood and its biology and pathogenicity to pine trees. Nematologica 25, 353-361.
17. MASSEY, C.L. (1971). Nematode associates of several species of Pisodes (Coleoptera: Curculionidae). Annals of the Entomological Society of America 64, 162-169.
18. POWERS, T.O. & ADAMS, B.J. (1994). Nucleotide sequences in nematode systematics. In: Lamberti, F. (Ed.). Advances in molecular plant nematology. New York, USA, Plenum Press, pp. 99-108.
19. POWERS, T.O., TODD, T.C., BURNELL, A.M., MURRAY, P.C.B., FLEMING, C.C., SZALANSKI, A.L., ADAMS, B.A. & HARRIS, T.S. (1997). The internal transcribed spacer region as a taxonomic marker for nematodes. Journal of Nematology 29, 441-450.
20. RIGA, E., BECKENBACH, K. & WEBSTER, J.M. (1992). Taxonomic relationships of Bursaphelenchus xylophilus and B. mucronatus based on interspecific and intra specific cross-hybridisation and DNA analysis. Fundamental and Applied Nematology 15, 391-395.
21. RUTHERFORD, T.A., MAMIYA, Y. & WEBSTER, J.M. (1990). Nematode-induced pine wilt disease: factors influencing its occurrence and distribution. Forest Science 36, 145-155.
22. SAITOU, N. & NEI, S. (1987). The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4, 406-425.
23. SAMBROOK, J., FRITSCH, E.F. & MANIATIS, T. (1989). Molecular cloning: a laboratory manual. Plainview, NY, USA, Cold Spring Harbor Laboratory Press.
24. SANGER, F., NICKLEN, S. & COULSON, A.R. (1977). DNA sequencing with chain-terminating inhibitors. Proceedings of the National Academy of Sciences, USA 74, 5463-5467.
25. SNUTCH, T.P., HESCHL, M.F.P. & BAILLIE, D.L. (1983). The Caenorhabditis elegans hsp70 gene family: a molecular genetic characterisation. Gene 64, 241-255.
26. SWOFFORD, D.L. (1993). PAUP: Phylogenetic analysis using parsimony. Version 3.1. Champaign, IL, USA, Illinois Natural History Society.
27. SWOFFORD, D.L. (1999). PAUP* 4.b1. Sunderland, MA, USA, Sinauer Associates.
28. SWOFFORD, D.L., OLSEN, G.J., WADDELL, P.J. & HILLIS, D.M. (1996). Phylogenetic inference. In: Hillis, D.M., Moritz, C. & Mable, B.K. (Eds). Molecular systematics. Sunderland, MA, USA, Sinauer Associates, pp. 407-514.
29. VAN DE PEER, Y. & DE WACHTER, R. (1993). TREECON: A software package for the construction and drawing of evolutionary trees. Computer Applications in the Biosciences 9, 177-182.
30. VAN DE PEER, Y. & DE WACHTER, R. (1994). TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Computer Applications in the Biosciences 10, 569-570.
31. WEBSTER, J.M., ANDERSON, R.V., BAILLIE, D.L., BECKENBACH, K., CURRAN, J. & RUTHERFORD, T.A. (1990). DNA probes for differentiating isolates of the pinewood nematode species complex. Revue de Nématologie 13, 255-263.
32. WINGFIELD, M.J., BLANCHETTE, R.A. & NICHOLLS, T.H. (1984). Is the pinewood nematode an important pathogen in the United States? Journal of Forestry 82, 232-235.