Adenines at -11, -9 and -8 play a key role in the binding of Bacillus subtilis Eσ(A) RNA polymerase to -10 region single-stranded DNA

Nucleic Acids Research

Volumn 27, Issue 23, 1999, Pages 4541-4546

  Qiu, Jian ^a   Helmann, John D ^a  

^a Cornell University ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; OLIGONUCLEOTIDE; RNA POLYMERASE; SINGLE STRANDED DNA;

ARTICLE; BACILLUS SUBTILIS; CONSENSUS SEQUENCE; DNA BINDING; DNA DENATURATION; ENZYME BINDING; ENZYME SPECIFICITY; ENZYME SUBUNIT; POINT MUTATION; PRIORITY JOURNAL; PROMOTER REGION;

ADENINE; BACILLUS SUBTILIS; BASE SEQUENCE; DNA, SINGLE-STRANDED; DNA-DIRECTED RNA POLYMERASES; PROTEIN BINDING; SIGMA FACTOR;

BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0033485479     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (35)

1. Helmann, J.D. (1994) In Conaway, R.C. and Conaway, J.W. (eds), Transcription: Mechanisms and Regulation. Raven Press, New York, pp. 1-17.
2. Gross, C.A., Lonetto, M. and Losick, R. (1992) In McKnight, S.L. and Yamamoto, K.R. (eds), Transcriptional Regulation, Vol. 1. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 129-176.
3. Helmann, J.D. and Chamberlin, M.J. (1988) Annu. Rev. Biochem., 57, 839-872.
4. deHaseth, P.L., Zupancic, M. and Record, M.T., Jr (1998) J. Bacteriol., 180, 3019-3025.
5. Travers, A.A. (1987) CRC Crit. Rev. Biochem., 22, 181-198.
6. Roy, S., Garges, S. and Adhya, S. (1998) J. Biol. Chem., 273, 14059-14062.
7. Bown, J., Barne, K., Minchin, S. and Busby, S. (1997) Nucleic Acids Mol. Biol., 11, 41-52.
8. Ross, W., Gosink, K.K., Salomon, J., Igarashi, K., Zou, C., Ishihama, A., Severinov, K. and Gourse, R.L. (1993) Science, 262, 1407-1413.
9. Ross, W., Aiyar, S.E., Slomon, J. and Gourse, R.L. (1998) J. Bacteriol., 180, 5375-5383.
10. Tang, Y., Murakami, K., Ishihama, A. and deHaseth, P.L. (1996) J. Bacteriol., 178, 6945-6951.
11. Ellinger, T., Behnke, D., Bujard, H. and Gralla, J.D. (1994) J. Mol. Biol., 239, 455-465.
12. Juang, Y.-L. and Helmann, J.D. (1994) J. Mol. Biol., 235, 1470-1488.
13. Rong, J.C. and Helmann, J.D. (1994) J. Bacteriol., 176, 5218-5224.
14. Huang, X., Lopez de Saro, F.J. and Helmann, J.D. (1997) Nucleic Acids Res., 25, 2603-2609.
15. Malhotra, A., Severinova, E. and Darst, S.A. (1996) Cell, 87, 127-136.
16. Waldburger, C., Gardella, T., Wong, R. and Susskind, M.M. (1990) J. Mol. Biol., 215, 267-276.
17. Marr, M.T. and Roberts, J.W. (1997) Science, 276, 1258-1260.
18. Callaci, S., Heyduk, E. and Heyduk, T. (1998) J. Biol. Chem., 273, 32995-33001.
19. Juang, Y.L. and Helmann, J.D. (1994) J. Mol. Biol., 239, 1-14.
20. Burgess, R.R. and Jendrisak, J.J. (1975) Biochemistry, 14, 4634-4638.
21. Hager, D.A., Jin, D.J. and Burgess, R.R. (1990) Biochemistry, 29, 7890-7894.
22. Lisser, S. and Margalit, H. (1993) Nucleic Acids Res., 21, 1507-1516.
23. Helmann, J.D. (1995) Nucleic Acids Res., 23, 2351-2360.
24. deHaseth, P.L. and Helmann, J.D. (1995) Mol. Microbiol., 16, 817-824.
25. Helmann, J.D. and deHaseth, P.L. (1999) Biochemistry, 38, 5959-5967.
26. Fedoriw, A.M., Liu, H., Anderson, V.E. and deHaseth, P.L. (1998) Biochemistry, 37, 11971-11979.
27. Guo, Y. and Gralla, J.D. (1998) Proc. Natl Acad. Sci. USA, 95, 11655-11660.
28. Roberts, C.W. and Roberts, J.W. (1996) Cell, 86, 495-501.
29. Buckle, M., Pemberton, I.K., Jacquet, M.A. and Buc, H. (1999) J. Mol. Biol., 285, 955-964.
30. Li, X.-Y. and McClure, W.R. (1998) J. Biol. Chem., 273, 23558-23566.
31. Hawley, D.K. and McClure, W.R. (1983) Nucleic Acids Res., 11, 2237-2255.
32. Moyle, H., Waldburger, C. and Susskind, M.M. (1991) J. Bacteriol., 173, 1944-1950.
33. Oliphant, A.R. and Struhl, K. (1988) Nucleic Acids Res., 16, 7673-7683.
34. Danot, O. and Raibaud, O. (1994) J. Mol. Biol., 238, 643-648.
35. Roberts, R.J. and Cheng, X. (1998) Annu. Rev. Biochem., 67, 181-198.