Phylogeny of osmundaceae inferred from rbcL nucleotide sequences and comparison to the fossil evidences

Journal of Plant Research

Volumn 112, Issue 4, 1999, Pages 397-404

  Yatabe, Yoko ^a   Nishida, Harufumi ^b   Murakami, Noriaki ^a  

^a KYOTO UNIVERSITY   (Japan)

^b CHUO UNIVERSITY   (Japan)

Author keywords

Living fossil; Molecular phylogeny; Osmundaceae; rbcL

Indexed keywords

JAPONICA; LEPTOPTERIS; OSMUNDA CINNAMOMEA; OSMUNDA CLAYTONIANA; OSMUNDA JAPONICA; OSMUNDA REGALIS; OSMUNDACEAE; PLENASIUM; TODEA;

EID: 0033479002     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/pl00013894     Document Type: Article

References (36)

1. Arnold, C.A. 1964. Mesozoic and Tertiary fern evolution and distribution. Mem. Torrey Bot. Club 21: 58-66.
2. Bousquet, J., Strauss, S.H., Doerksen, A.H. and Price, R.A. 1992. Extensive variation in evolutionary rate of rbcL gene sequences among seed plants. Proc. Natl. Acad. Sci. USA. 89: 7844-7848
3. Chase, M.W., Soltis, D.E., Olmstead, R.G., Morgan, D., Les, D.H., Mishler, B.D., Duvall, M.R., Price, R.A., Hills, H.G., Qiu, Y., Kron, K.A., Rettig, J.H., Conti, E., Palmer, J.D., Manhart, J.R., Sytsma, K.J., Michaels, H.J., Clark, W.D., Hedren, M., Gaut, B.S., Jansen, R.K., Kim, K., Wimpee, C.F, Smith, J.F., Furnier, G.R., Strauss, S.H., Xiang, Q., Swensen, G.M., Williams, S.E., Gadek, P.A., Quinn, C.J., Eguiarte, L.E., Golenberg, E., Learn, G.H., Graham, Jr. S.W., Barret, S.C.H., Dayanandan, S. and Albelt, V.A. 1993. Phylogenetis of seed plants: An analysis of nucleotide sequences from the plastid gene rbcL Ann. Missouri Bot. Gard. 80: 528-580.
4. Diels, L. 1898. Osmundaceae. In A. Engler ed., Die Natürlichen Pflanzenfamilien, Verlag von Wilhelm Engelmann, Leipzig, pp. 372-380.
5. Doyle, J.J. and Doyle, J.L. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.
6. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
7. Felsenstein, J. 1995. PHYLIP: Phylogeny Inference Package, vergion 3.572c, University of Washington, Seattle.
8. Gould, R.E. 1970. Palaeosmunda, a new genus of siphonostelic osmundaceous trunks from the Upper Permian of Queensland. Palaeontology 13: 10-28.
9. Hanks, S.L. and Fairbrothers, D.E. 1981. A palynological investigation of three species of Osmunda. Bull. Torrey Bot. Club 108: 1-6
10. Harris, T.M. 1961. The Yorkshire Jurassic flora, vol. 1, Thallophytes-Pteridophytes. British Museum of Natural history, London.
11. Hasebe, M., Oumori, T., Nakazawa, M., Iwatsuki, K. and Kato, M. 1994. rbcL gene sequences gave new clue to evolutionary lineage for leptosporangiate ferns. Proc. Natl. Acad. Sci. USA. 91: 5730-5734.
12. Hasebe, M., Wolf, P.G., Pryer, K.M., Ueda, K., Ito, ,M., Sano, R., Gastony, G.J., Yokoyama, J., Manhart, J.R., Murakami, N., Crane, E.H., Haufler, C.H. and Hauk. W. 1995. Fern phylogeny based on rbcL nucleotide sequences. Amer. Fern J. 85: 134-181.
13. Hewitson, W.H. 1962. Comparative morphology of the Osmundaceae. Ann. Missouri Bot. Gard. 49: 57-93.
14. Hooker, W.J. and Baker, J.G. 1868. Synopsis Filicum; or a synopsis of all ferns, including the Osmundaceae, Schizeaceae, Schizeaceae, Marattiaceae, and Ophioglossaceae. Hardwicke, London.
15. Ina Y. 1995. New Methods for Estimating the Numbers of Synonymous and Nonsynonymous Substitutions. J. Molec. Evol. 40: 190-226.
16. Iwatsuki, K. 1995. Flora of Japan. Kodansha, Tokyo.
17. Jongmans, W. and Dijkstra, S.J. 1962. Fossilium Catalogus, II. Plantae, Pars 49. Ysel Press, Deventer.
18. Jung, W. 1972. Ein fertiler Osmundaceen Wedel aus dem fränkischen Rhät/Lias und seine Bedeutung für die Gliederung der Gattung Todites Seward. Geol. Bl. fuer Nordost-Bayern 22: 25-32
19. Kimura, M. 1980. A simple method for estimation evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Molec. Evol. 16: 110-120.
20. Kon'no, E. 1972. Some Late Triassic plants from the southwestern border of Sarawak, East Malaysia. Geol. Palaeontol. of South Asia 10: 125-178.
21. Kramer, K.U. 1990. Osmundaceae. In K.U. Kramer and P.S. Green eds, The Families and Genera of Vascular Plants, vol. 1. Pteridophytes and Gymnosperms. Springer Verlag, New York, pp. 197-200.
22. Li, J., and Haufler, C.H. 1994. Phylogeny, biogeography, and population biology of Osmunda species: Insights from Isozymes. Amer. Fern J. 84: 105-114.
23. Maddison, W.P., and Maddison, D.R. 1992. MacClade ver. 3. Sinauer Associates, Sunderland.
24. Miller, C.N. Jr. 1967. Evolution of the fern genus Osmunda. Contrib. Mus. Paleontol. Univ. Mich. 21: 139-203.
25. Miller, C.N. Jr. 1971. Evolution of the fern family Osmundaceae based on anatomical studies. Contrib. Mus Paleontol. Univ. Mich. 23: 105-169.
26. Murakami, N., Nogami, S., Watanabe, M. and Iwatsuki, K. 1999. Phylogeny of Aspleniaceae inferred from rbcL nucleotide sequences. Amer. Fern J. 89: 232-243.
27. Phipps, C.J., Taylor, T.N., Taylor, E.L., Cuneo, N.B., Boucher, L.D. and Yao, X. 1998. Osmunda (Osmundaceae) from the Triassic of Antarctica: an example of evolutionary stasis. Amer. J. Bot. 85: 888-895.
28. Presl, C.B. 1845. Supplementum Tentaminis Pteridographiae, Prague, London.
29. Savard, L., Li, P., Strauss, S.H., Chase, M.W., Michaud M. and Bousquet, J. 1994. Chloroplast and nuclear gene sequences indicate Late Pennsylvanian time for the last common ancester of extant seed plants. Proc. Natl. Acad. Sci. USA. 91: 5163-5167.
30. Seward, A.C. 1910. Fossil plants, volume 2. Hafner Publishing, New York.
31. Shimura, Y. 1964. Observations on the fertile fronds of Osmunda lancea var. latipinnula. J. Jap. Bot. 39: 18-22.
32. Shimura, Y., and Matsumoto, S. 1977. On the chromosomal association in meiosis of Osmunda X intermedia. J. Jap. Bot. 52: 25-26.
33. Swofford, D.L. 1993. Phylogenetic Analysis Using Parsimony, version 3, 1, User's manual. Illinois Natural History Survey, Champaign.
34. Tidwell, W. and Jones, R. 1987. Osmundacalis nerii, a new osmundaceous species from Tasmania, Australia. Palaeontogr. Abt. B Palaeophytol. 204: 181-191.
35. Wagner, W.H. Jr., Wagner, F.S., Miller, C.N. Jr. and Wagner, D.H. 1978. New observations on the royal fern hybrid OsmundaXruggii. Rhodora 80: 92-106.
36. Wu, C.-I. and Li W.-H. 1985. Evidence for higher rates of nucleotide substitution in rodents than in man. Proc. Natl. Acad. Sci. USA. 82: 1741-1745.