A polymorphic microsatellite in the limit dextrinase gene of barley (Hordeum vulgare L.)

Molecular Breeding

Volumn 5, Issue 6, 1999, Pages 569-577

  Li, Cheng Dao ^a   Zhang, Xiao Qi ^a   Eckstein, Pete ^a   Rossnagel, Brian G ^a   Scoles, Graham J ^a  

^a UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

Debranching enzyme; Malting quality; Marker assisted selection; Microsatellite

Indexed keywords

ALLELE; AMYLASE; CHROMOSOMAL LOCALIZATION; CLONED GENE; CULTIVAR; DNA FRAGMENT; ENZYME ACTIVITY; EXON; GENE LOCATION; GENE SEGREGATION; GENETIC MARKER; GENETIC SELECTION; INTRON; MALT; MICROSATELLITE DNA; PLANT GENETICS; PLANT GENOME; PRIMER DNA;

CLONING; DNA SEQUENCES; ENZYMES; MAPPING; PLANTS (BOTANY); POLYMERASE CHAIN REACTION;

DEBRANCHING; DEBRANCHING ENZYME; DNA FRAGMENT; HORDEUM VULGARE L; LIMIT DEXTRINASE; MALTING QUALITY; MARKER-ASSISTED SELECTION; MICROSATELLITES; PCR PRIMERS; SIMPLE SEQUENCE REPEATS;

GENES;

HORDEUM VULGARE;

EID: 0033451136     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1009692207966     Document Type: Article

References (41)

1. Briggs DE: Barley germination: Biochemical changes and hormonal control. In: Shewry PR (ed.) Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology, pp. 369-378. CAB International, Wallingford, UK (1992).
2. Bryce JH, Kim NJ, Zammit R, McCafferty CA, Pinheiro MGM, Kendall GL: Branched dextrins in wort: is their presence inevitable? EBC Congress, pp. 285-292 (1995).
3. Burton RA, Zhang XQ, Hrmova M, Fincher GB: A single limit dextrinase gene is expressed both on the developing endosperm and in germinated grains of barley. Plant Physiol 119: 859-871 (1999).
4. Enevoldsen BS, Schmidt F: Dextrins in wort and beer. II. Distribution of oligo- and megalo-saccharides during mashing. EBC Congress, pp. 135-148 (1973).
5. Enevoldsen BS: Debranching in brewing. EBC Congress, pp. 683-697 (1975).
6. Fedak G: Wide crosses in Hordeum. In: Rasmusson DC (ed) Barley, pp. 155-186. ASA-CSSA-SSSA, Madison, WI (1985).
7. Foster AE, Prentice N: Barley. In: Olson RA and Frey KJ (eds) Nutritional Quality of Cereal Grains: Genetic and Agronomic Improvement, pp. 337-396. ASA, CSSA and SSSA, Madison, WI (1987).
8. Hardie GD: Control of carbohydrase formation by gibberellic acid in barley endosperm. Phytochemistry 14: 1719-1722 (1975).
9. Hayes PM, Liu BH, Knapp SJ, Chen F, Jones B, Blake T, Franckowiak J, Rasmusson D, Sorrells M, Ullrich SE, Wesenberg D, Kleinhofs: Quantitative trait locus effects and environmental interaction in a sample of North American barley germplase. Theor Appl Genet 87: 392-401 (1993).
10. Hoseney RC: An overview of malting and brewing. Cereal Foods World 39: 675-679 (1994).
11. Kasha KJ, Falk DE, Ziauddin Z: Potential improvement of barley quality through genetic engineering. In: MacGregor AW, Bhatty RS (eds.) Barley: Chemistry and Technology, pp. 419-435. American Association of Cereal Chemists, St. Paul, MN (1993).
12. Kleinhofs A, Kilian A, Saghai Maroof MA, Biyashev RM, Hayes P, Chen FQ, Lapitan N, Fenwick A, Blake TK, Kanazin V, Ananiev E, Dahleen L, Kudrna D, Bollinger J, Knapp SJ, Liu B, Sorrells M, Heun M, Franckowiak A, Hoffman D, Skadsen R, Steffenson BJ: A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome. Theor Appl Genet 86: 705-712 (1993).
13. Kosambi, DD: The estimation of map distance from recombination values. Ann Eugen 12: 172-175 (1944).
14. Kristensen M, Svensson B, Larsen J: Purification and characterization of barley limit dextrinase during malting. EBC Congress, pp. 37-43 (1993).
15. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newberg L: MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181 (1987).
16. Langridge P, Karakousis A, Collins N, Kretschmer J, Manning S: A consensus linkage map of barley. Mol. Breed. 1: 389-395 (1995).
17. Lee WJ, Pyler RE: Barley malt limit dextrinase: varietal, environmental and malting effects. J Am Brew Chem 42: 11-17 (1984).
18. Li CD: Genetic control of hydrolytic enzyme activity in germinated barley (Hordeum vulgare L.). Ph. D. thesis, University of Adelaide, Adelaide, Australia (1998).
19. Longstaff MA, Bryce JH: Levels of limit dextrinase activity in malting barley. EBC Congress, pp. 593-600 (1991).
20. Longstaff MA, Bryce JH: Development of limit dextrinase in germinated barley: evidence of proteolytic activation. Plant Physiol 101: 881-889 (1993).
21. MacGregor AW: Alpha-amylase, limit dextrinase and alpha-glucosidase enzymes in barley and malt. CRC Crit Rev Biotechnol 5: 117-128 (1987).
22. MacGregor AW, Fincher GB: Carbohydrates of the barley grain. In: MacGregor AW, Bhatty RS (eds.) Barley: Chemistry and Technology, pp. 73-130. America Association of Cereal Chemists, St. Paul, MN (1993).
23. MacGregor AW, Macri LJ, Schroeder SW, Bazin SL: Limit dextrinase from malted barley: extraction, purification, and characterization. Cereal Chem 71: 610-617 (1994).
24. MacGregor AW, Macri LJ, Bazin SL, Salder GW: Limit dextrinase inhibitor in barley and malt and its possible role in malting and brewing. EBC Congress, pp. 185-192 (1995).
25. Macri LJ, MacGregor AW, Schroeder SW, Bazin SL: Detection of a limit dextrinase inhibitor in barley. J Cereal Sci 18: 103-106 (1993).
26. Maeda I, Kiribuchi S, Nakamura M: Digestion of barley starch granules by the combined action of alpha- and beta-amylases purified from barley and barley malt. Agric Biol Chem 42: 259-267 (1978).
27. McCleary BV: Measurement of the content of limit dextrinase in cereal flours. Carbohydrate Res 227: 257-268 (1992).
28. Nakamura Y, Umemoto T, Ogata N, Kuboki Y, Yano M, Sasaki T: Starch debranching enzyme (R-enzyme or pullulanase) from developing rice endosperm - purification, cDNA and chromosomal localization of the gene. Planta 199: 209-218 (1996).
29. Procunier JD, Jie X, Kasha KJ: A rapid and reliable DNA extraction method from higher plants. Barley Genet Newsl 20: 74-75 (1990).
30. Sambrook J, Fritsch EF, Manniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).
31. Serre L, Lauriere C: Limit dextrinase in cereal seed. Sci Aliments 9: 645-663 (1989).
32. Sissons MJ: Studies of barley limit dextrinase. Ph. D. thesis, University of Adelaide, Adelaide, Australia (1992).
33. Sissons MJ, Lance RCM, Sparrow DHP: Studies on limit dextrinase in barley. I. Purification of malt limit dextrinase and production of monospecific antibodies. J Cereal Sci 16: 107-116 (1992).
34. Sissons MJ, Lance RCM, Sparrow DHB: Studies on limit dextrinase in barley. II Application of an ELISA and immunoblotting to studies of genetic variability and malting effects. J Cereal Sci 16: 117-128 (1992).
35. Sissons MJ, MacGregor AW: Hydrolysis of barley starch granules by alpha-glucosidase from malt. J Cereal Sci 19: 161-169 (1994).
36. Sun Z, Henson GA: Degradation of native starch granules by barley alpha-glucosidases. Plant Physiol 94: 320-327 (1990).
37. Sun Z, Henson GA: A quantitative assessment of the importance of barley seed alpha-amylase, beta-amylase, debranching enzyme, and alpha-glucosidase in starch degradation. Arch Biochem Biophys 284: 298-305 (1991).
38. Tautz D, Renz M (1984) Simple sequences are ubiquitious repetitive components of eukaryotic genomes. Nucl Acids Res 12: 4127-4137 (1984).
39. Weir, BS: Genetic data analysis II (2nd ed). Sinauer Associates, Sunderland, MA (1996).
40. Weising K, Winter P, Huttel B, Kahl G: Microsatellite markers for molecular breeding. In: Basra, AS (ed) Crop Sciences: Recent Advances, vol. 1, pp. 113-143 (1998).
41. Wise RP, Rohde W, Salamini F: Nucleotide sequence of the Bronze-1 homologous gene from Hordeum vulgare. Plant Mol Biol 14: 277-279 (1990).