A functional-phylogenetic system for the classification of transport proteins

Journal of Cellular Biochemistry

Volumn 76, Issue SUPPL. 32/33, 1999, Pages 84-94

  Saier Jr , Milton H ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; PYROPHOSPHATE;

ARCHAEBACTERIUM; ARTICLE; BACTERIAL GENE; CHANNEL GATING; EUKARYOTE; GENE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN FAMILY; PROTEIN TRANSPORT; ANIMAL; CLASSIFICATION; ENERGY METABOLISM; GENETICS; GENOME; INTERNET; METABOLISM; MULTIGENE FAMILY; PHYSIOLOGY; REVIEW;

ARCHAEA; BACTERIA (MICROORGANISMS); EUKARYOTA;

ANIMALS; CARRIER PROTEINS; ENERGY METABOLISM; GENOME; INTERNET; MEMBRANE TRANSPORT PROTEINS; MULTIGENE FAMILY; PHYLOGENY;

EID: 0033428109     PISSN: 07302312     EISSN: None     Source Type: Journal    
DOI: 10.1002/(sici)1097-4644(1999)75:32+<84::aid-jcb11>3.0.co;2-m     Document Type: Article

References (9)

1. Jack DL, Paulsen IT, Saier MH Jr. 1999. The APC superfamily of transporters specific for amino acids, polyamines, and organocations. Microbiol (submitted).
2. Pao SS, Paulsen IT, Saier MH Jr. 1998. The major facilitator superfamily. Microbiol Mol Biol Rev 62:1-32.
3. Paulsen IT, Sliwinski MK, Saier MH Jr. 1998a. Microbial genome analyses: global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities. J Mol Biol 277:573-592.
4. Paulsen IT, Sliwinski MK, Nelissen B, Goffeau A, Saier MH Jr. 1998b. Unified inventory of established and putative transporters encoded within the complete genome of Saccharomyces cerevisiae. FEBS Lett 430:116-125.
5. Saier MH Jr. 1998. Molecular phylogeny as a basis for the classification of transport proteins from bacteria, archaea and eukarya. In: Poole RK, editor. Advances in microbial physiology. San Diego: Academic Press, p 81-136.
6. Saier MH Jr. 1999a. A proposal for classification of transmembrane transport proteins in living organisms. In: VanWinkle L, editor. Biomembrane transport. San Diego: Academic Press, p 265-276.
7. Saier MH Jr. 1999b. Eukaryotic transmembrane solute transport systems. In: Jeon KW, editor. International review of cytology: a survey of cell biology. San Diego: Academic Press, p 61-136.
8. Saier MH Jr. 1999c. Genome archeology leading to the characterization and classification of transport proteins. Curr Opin Microbiol 2:555-561.
9. Tseng T-T, Gratwick KS, Kollman J, Park D, Nies DH, Goffeau A, Saier MH Jr. 1999. The RND permease superfamily: an ancient, ubiquitous and diverse family that includes human disease and development proteins. J Mol Microbiol Biotechnol 1:107-125.