MULTICLUSTAL: A systematic method for surveying Clustal W alignment parameters

Bioinformatics

Volumn 15, Issue 10, 1999, Pages 862-863

  Yuan, Jeffrey ^a   Amend, Angela ^a   Borkowski, Joseph ^a   DeMarco, Reynold ^a   Bailey, Wendy ^a   Liu, Yuan ^a   Xie, Guochun ^a   Blevins, Richard ^a  

^a MERCK RESEARCH LABORATORIES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; COMPUTER PROGRAM; CONFERENCE PAPER; GENE SEQUENCE; INFORMATION PROCESSING; INTERNET; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE HOMOLOGY;

EID: 0033401943     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/15.10.862     Document Type: Conference Paper

References (4)

1. Horita, D.A., Baldisseri, D.M., Zhang, W., Altieri, A.S., Smithgall, T.E., Gmeiner, W.H. and Byrd, R.A. (1998) Solution structure of the Human Hck SH3 domain and identification of its ligand binding site. J. Mol. Biol., 278, 253-265.
2. Musacchio, A., Gibson, T., Lehto, V.P. and Saraste, M. (1992) SH3 - an abundant protein domain in search of a function. FEBS, 307, 55-61.
3. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
4. Yu, H., Rosen, M.K., Shin, T.B., Seidel-Dugan, C., Brugge, J.S. and Schreiber, S.L. (1992) Solution structure of the SH3 domain of Src and identification of its ligand-binding site. Science, 258, 1665-1668.