-
1
-
-
0029813420
-
The minimal cell genome: 'On being the right size'
-
Maniloff J. The minimal cell genome: 'on being the right size'. Proc. Natl. Acad. Sci. USA. 93:1996;10004-10006.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 10004-10006
-
-
Maniloff, J.1
-
2
-
-
0020769933
-
The primitive code and repeats of base oligomers as the primordial protein-encoding sequence
-
Ohno S., Epplen J.T. The primitive code and repeats of base oligomers as the primordial protein-encoding sequence. Proc. Natl. Acad. Sci. USA. 80:1983;3391-3395.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 3391-3395
-
-
Ohno, S.1
Epplen, J.T.2
-
3
-
-
0026323259
-
Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
-
Versalovic J., Koeuth T., Lupski J.R. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nuceic Acids Res. 19:1991;6823-6831.
-
(1991)
Nuceic Acids Res.
, vol.19
, pp. 6823-6831
-
-
Versalovic, J.1
Koeuth, T.2
Lupski, J.R.3
-
4
-
-
1842406595
-
Bacterial interspersed mosaic elements (BIMEs) are a major source of sequence polymorphism in E. coli intergenic regions including specific associations with a new insertion sequence
-
Bachellier S., Clément J.M., Hofnung M., Gilson E. Bacterial interspersed mosaic elements (BIMEs) are a major source of sequence polymorphism in E. coli intergenic regions including specific associations with a new insertion sequence. Genetics. 145:1997;551-562.
-
(1997)
Genetics
, vol.145
, pp. 551-562
-
-
Bachellier, S.1
Clément, J.M.2
Hofnung, M.3
Gilson, E.4
-
5
-
-
0345410365
-
-
J.D. Bruijn, J.R. Lupski, Weinstock G.M. Chapman & Hall
-
Versalovic J., Lupski J.R. Bacterial Genomes. Bruijn F.J.D, Lupski J.R, Weinstock G.M. 1998;38-48 Chapman & Hall.
-
(1998)
Bacterial Genomes
, pp. 38-48
-
-
Versalovic, J.1
Lupski, J.R.2
-
7
-
-
0343543478
-
-
J.D. Bruijn, J.R. Lupski, & G.M. Weinstock. Chapman & Hall
-
Syvanen M. Bruijn F.J.D, Lupski J.R, Weinstock G.M. Bacterial Genomes. 1998;213-220 Chapman & Hall.
-
(1998)
Bacterial Genomes
, pp. 213-220
-
-
Syvanen, M.1
-
8
-
-
0028829125
-
The minimal gene complement of Mycoplasma genitalium
-
Fraser C.M., Gocayne J.D., White O., Adams M.D., Clayton R.A., Fleischmann R.D., Bult C.J., Kerlavage A.R., Sutton G., et al. The minimal gene complement of Mycoplasma genitalium. Science. 270:1995;397-403.
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
Gocayne, J.D.2
White, O.3
Adams, M.D.4
Clayton, R.A.5
Fleischmann, R.D.6
Bult, C.J.7
Kerlavage, A.R.8
Sutton, G.9
-
9
-
-
10544255079
-
Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae
-
Himmelreich R., Hilbert H., Plagens H., Pirki E., Li B.C., Herrmann R. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucleic Acids Res. 24:1996;4420-4449.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 4420-4449
-
-
Himmelreich, R.1
Hilbert, H.2
Plagens, H.3
Pirki, E.4
Li, B.C.5
Herrmann, R.6
-
10
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobtacter pylori
-
Tomb J.F., White O., Kerlavage A.R., Clayton R.A., Sutton G.G., Fleischmann R.D.E.T., Al. The complete genome sequence of the gastric pathogen Helicobtacter pylori. Nature. 388:1997;539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.E.T.6
Al7
-
11
-
-
0030731108
-
The complete genome sequence of the Gram-positive bacterium Bacillus subtilis
-
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M., Bessieres P., Bolotin A., Borchert S., et al. The complete genome sequence of the Gram-positive bacterium Bacillus subtilis. Nature. 390:1997;249-256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
-
12
-
-
0032508046
-
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
-
Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C., Harris D., Gordon S.V., Eiglmeier K., et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature. 393:1998;537-544.
-
(1998)
Nature
, vol.393
, pp. 537-544
-
-
Cole, S.T.1
Brosch, R.2
Parkhill, J.3
Garnier, T.4
Churcher, C.5
Harris, D.6
Gordon, S.V.7
Eiglmeier, K.8
-
14
-
-
0032843459
-
Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes
-
Rocha E., Danchin A., Viari A. Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes. Mol. Biol. Evol. 16:1999;1219-1230.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1219-1230
-
-
Rocha, E.1
Danchin, A.2
Viari, A.3
-
15
-
-
84976712224
-
Proceedings 4th Annual ACM Symposium Theory of computing
-
Karp R.M., Miller R.E., Rosenberg A.L. Proceedings 4th Annual ACM Symposium Theory of computing. ACM. 1972;125-136.
-
(1972)
ACM
, pp. 125-136
-
-
Karp, R.M.1
Miller, R.E.2
Rosenberg, A.L.3
-
16
-
-
0029270682
-
Searching for flexible repeated patterns using a non-transitive relation
-
Soldano H., Viari A., Champesme M. Searching for flexible repeated patterns using a non-transitive relation. Patt. Recogn. Lett. 16:1995;233-246.
-
(1995)
Patt. Recogn. Lett.
, vol.16
, pp. 233-246
-
-
Soldano, H.1
Viari, A.2
Champesme, M.3
-
18
-
-
0033514473
-
Identification of a vibrio cholerae RTX toxin gene cluster that is tightly linked to the cholera toxin prophage
-
Lin W., Fullner K.J., Clayton R., Sexton J.A., Rogers M.B., Calia K.E., Calderwood S.B., Fraser C., Mekalanos J.J. Identification of a vibrio cholerae RTX toxin gene cluster that is tightly linked to the cholera toxin prophage. Proc. Natl. Acad. Sci. USA. 96:1999;1071-1076.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 1071-1076
-
-
Lin, W.1
Fullner, K.J.2
Clayton, R.3
Sexton, J.A.4
Rogers, M.B.5
Calia, K.E.6
Calderwood, S.B.7
Fraser, C.8
Mekalanos, J.J.9
-
19
-
-
0032562596
-
A distinctive class of integron in the Vibrio cholerae genome
-
Mazel D., Dychinco B., Webb V.A., Davies J. A distinctive class of integron in the Vibrio cholerae genome. Science. 280:1998;605-608.
-
(1998)
Science
, vol.280
, pp. 605-608
-
-
Mazel, D.1
Dychinco, B.2
Webb, V.A.3
Davies, J.4
-
20
-
-
0029746160
-
DNA repeats identify novel virulence genes in Haemophilus influenzae
-
Hood D.W., Deadman M.E., Jennings M.P., Bisercic M., Fleischmann R.D., Venter J.C., Moxon R. DNA repeats identify novel virulence genes in Haemophilus influenzae. Proc. Natl. Acad. Sci. USA. 93:1996;11121-11125.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 11121-11125
-
-
Hood, D.W.1
Deadman, M.E.2
Jennings, M.P.3
Bisercic, M.4
Fleischmann, R.D.5
Venter, J.C.6
Moxon, R.7
-
22
-
-
0029618707
-
Characterisation of repetitive DNA in the Mycoplasma genitalium genome: Possible role in the generation of antigenic variation
-
Peterson S.N., Bailey C.C., Jensen J.S., Borre M.B., King E.S., Bott K.F., Hutchisson I.I.I., Ca. Characterisation of repetitive DNA in the Mycoplasma genitalium genome: possible role in the generation of antigenic variation. Proc. Natl. Acad. Sci. USA. 92:1995;11829-11833.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 11829-11833
-
-
Peterson, S.N.1
Bailey, C.C.2
Jensen, J.S.3
Borre, M.B.4
King, E.S.5
Bott, K.F.6
Hutchisson, I.I.I.7
Ca8
-
23
-
-
0031470826
-
Genomic seqience of a Lyme disease spirochaete, Borrelia burgdorferi
-
Fraser C.M., Casjens S., Huang W.M., Sutton G.S., Clayton R., Lathigra R., White O., et al. Genomic seqience of a Lyme disease spirochaete, Borrelia burgdorferi. Nature. 390:1997;580-586.
-
(1997)
Nature
, vol.390
, pp. 580-586
-
-
Fraser, C.M.1
Casjens, S.2
Huang, W.M.3
Sutton, G.S.4
Clayton, R.5
Lathigra, R.6
White, O.7
-
24
-
-
0027138817
-
A survey of the Mycoplasma genitalium genome by using random sequencing
-
Peterson S.N., Hu P.C., Bott K.F., Hutchisson C.A. A survey of the Mycoplasma genitalium genome by using random sequencing. J. Bacteriol. 175:1993;7918-7930.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 7918-7930
-
-
Peterson, S.N.1
Hu, P.C.2
Bott, K.F.3
Hutchisson, C.A.4
-
25
-
-
0031770391
-
Molecular biology and pathogenicity of Mycoplasmas
-
Razin S., Yogev D., Naot Y. Molecular biology and pathogenicity of Mycoplasmas. Microbiol. Mol. Biol. Rev. 62:1998;1094-1165.
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 1094-1165
-
-
Razin, S.1
Yogev, D.2
Naot, Y.3
-
26
-
-
0030811859
-
Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium
-
Himmelreich R., Plagens H., Hilbert H., Reiner B., Herrmann R. Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium. Nucleic Acids Res. 25:1997;701-712.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 701-712
-
-
Himmelreich, R.1
Plagens, H.2
Hilbert, H.3
Reiner, B.4
Herrmann, R.5
-
27
-
-
0032561496
-
Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis
-
Stephens R.S., Kalman S., Lammel C., Fan J., Marathe R., Aravind L., Mitchell W., Olinger L., Tatusov R.L., Zhao Q., Koonin E.V., Davis R.W. Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science. 282:1998;754-759.
-
(1998)
Science
, vol.282
, pp. 754-759
-
-
Stephens, R.S.1
Kalman, S.2
Lammel, C.3
Fan, J.4
Marathe, R.5
Aravind, L.6
Mitchell, W.7
Olinger, L.8
Tatusov, R.L.9
Zhao, Q.10
Koonin, E.V.11
Davis, R.W.12
-
28
-
-
0032512051
-
The genome sequence of Rickettsia prowazekii and the origin of mitochondria
-
Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T., Alsmark U.C.M., Podowski R.M., Näslund A.K., Eriksson A.S., Winkler H.H., Kurland C.G. The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature. 396:1998;133-143.
-
(1998)
Nature
, vol.396
, pp. 133-143
-
-
Andersson, S.G.E.1
Zomorodipour, A.2
Andersson, J.O.3
Sicheritz-Ponten, T.4
Alsmark, U.C.M.5
Podowski, R.M.6
Näslund, A.K.7
Eriksson, A.S.8
Winkler, H.H.9
Kurland, C.G.10
-
30
-
-
0032169578
-
Replicational and transcriptional selection on codon usage in Borrelia burgdorferi
-
McInerney J.O. Replicational and transcriptional selection on codon usage in Borrelia burgdorferi. Proc. Natl. Acad. Sci. USA. 95:1998;10698-10703.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 10698-10703
-
-
McInerney, J.O.1
-
32
-
-
0030884601
-
A comparative study of duplications in bacteria and eukaryotes: The importance of telomeres
-
Coissac E., Maillier E., Netter P. A comparative study of duplications in bacteria and eukaryotes: the importance of telomeres. Mol. Biol. Evol. 14:1997;1062-1074.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1062-1074
-
-
Coissac, E.1
Maillier, E.2
Netter, P.3
-
33
-
-
0018173079
-
Genetic exchange in Bacillus subtilis in soil
-
Graham J.B., Istock C.A. Genetic exchange in Bacillus subtilis in soil. Mol. Gen. Genet. 166:1978;287-290.
-
(1978)
Mol. Gen. Genet.
, vol.166
, pp. 287-290
-
-
Graham, J.B.1
Istock, C.A.2
-
34
-
-
0028136885
-
Bacterial gene transfer by natural genetic transformation in the environment
-
Lorenz M.G., Wackernagel W. Bacterial gene transfer by natural genetic transformation in the environment. Microbiol. Rev. 58:1994;563-602.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 563-602
-
-
Lorenz, M.G.1
Wackernagel, W.2
-
35
-
-
0003547837
-
-
American Society for Microbiology, Washington DC
-
Dubnau D.I.N., Sonenshein A.L., Hoch J.A., Losick R. Bacillus subtilis and other Gram-positive bacteria. 1993;555-584 American Society for Microbiology, Washington DC.
-
(1993)
Bacillus Subtilis and Other Gram-positive Bacteria
, pp. 555-584
-
-
Dubnau, D.I.N.1
Sonenshein, A.L.2
Hoch, J.A.3
Losick, R.4
-
36
-
-
0015386454
-
Fate of transforming deoxyrribonucleic acid after uptake by competent Bacillus subtilis: Size and distribution of the integrated donor sequences
-
Dubnau D., Cirigliano C. Fate of transforming deoxyrribonucleic acid after uptake by competent Bacillus subtilis: size and distribution of the integrated donor sequences. J. Bacteriol. 111:1972;488-494.
-
(1972)
J. Bacteriol.
, vol.111
, pp. 488-494
-
-
Dubnau, D.1
Cirigliano, C.2
-
37
-
-
0017755586
-
Electron microscope visualisation of the products of Bacillus subtilis transformation
-
Fornilli S.L., Fox M.S. Electron microscope visualisation of the products of Bacillus subtilis transformation. J. Mol. Biol. 113:1977;181-191.
-
(1977)
J. Mol. Biol.
, vol.113
, pp. 181-191
-
-
Fornilli, S.L.1
Fox, M.S.2
-
38
-
-
0019473420
-
Plasmid transformation in Bacillus subtilis: DNA in plasmid pC194
-
Canosi U., Iglesias A., Trautner T.A. Plasmid transformation in Bacillus subtilis: DNA in plasmid pC194. Mol. Gen. Genet. 181:1981;434-440.
-
(1981)
Mol. Gen. Genet.
, vol.181
, pp. 434-440
-
-
Canosi, U.1
Iglesias, A.2
Trautner, T.A.3
-
39
-
-
0023219960
-
Two conjugation systems associated with Streptococcus faecalis plasmid pCF10: Identification of a conjugative transposon that transfers between S. faecalis and Bacillus subtilis
-
Christie P.J., Korman R.Z., Zahler S.A., Adsit J.C., Dunny G.M. Two conjugation systems associated with Streptococcus faecalis plasmid pCF10: identification of a conjugative transposon that transfers between S. faecalis and Bacillus subtilis. J. Bacteriol. 169:1987;2529-2536.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 2529-2536
-
-
Christie, P.J.1
Korman, R.Z.2
Zahler, S.A.3
Adsit, J.C.4
Dunny, G.M.5
-
40
-
-
0024670302
-
Competence-specific induction of the B. subtilis RecA protein analog: Evidence for dual regulation of a recombination protein
-
Lovett C.M., Love P.E., Yasbin R.E. Competence-specific induction of the B. subtilis RecA protein analog: evidence for dual regulation of a recombination protein. J. Bacteriol. 171:1989;2318-2322.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2318-2322
-
-
Lovett, C.M.1
Love, P.E.2
Yasbin, R.E.3
-
41
-
-
0024519313
-
Revised genetics of DNA metabolism in Bacillus subtilis
-
Mazza G., Galizzi A. Revised genetics of DNA metabolism in Bacillus subtilis. Microbiologica. 12:1989;157-179.
-
(1989)
Microbiologica
, vol.12
, pp. 157-179
-
-
Mazza, G.1
Galizzi, A.2
-
43
-
-
0027278850
-
The effect of DNA sequence divergence on sexual isolation in Bacillus
-
Roberts M.S., Cohan F.M. The effect of DNA sequence divergence on sexual isolation in Bacillus. Genetics. 134:1993;401-408.
-
(1993)
Genetics
, vol.134
, pp. 401-408
-
-
Roberts, M.S.1
Cohan, F.M.2
-
44
-
-
0032560491
-
The complete sequence of Bacillus subtilis: From sequence annotation to data management and analysis
-
Moszer I. The complete sequence of Bacillus subtilis: from sequence annotation to data management and analysis. FEBS Lett. 430:1998;28-36.
-
(1998)
FEBS Lett.
, vol.430
, pp. 28-36
-
-
Moszer, I.1
-
45
-
-
0028606283
-
Horizontal gene transfer: Evidence and possible consequences
-
Syvanen M. Horizontal gene transfer: evidence and possible consequences. Annu. Rev. Genet. 28:1994;237-261.
-
(1994)
Annu. Rev. Genet.
, vol.28
, pp. 237-261
-
-
Syvanen, M.1
-
46
-
-
0031963154
-
Distribution of chromosome length variation in natural isolates of Escherichia coli
-
Bergthorsson U., Ochman H. Distribution of chromosome length variation in natural isolates of Escherichia coli. Mol. Biol. Evol. 15:1998;6-16.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 6-16
-
-
Bergthorsson, U.1
Ochman, H.2
-
47
-
-
1842327434
-
Diversity and differential distribution of IS231, IS232 and IS240 among Bacillus cereus, Bacillus thuringiensis and Bacillus mycoides
-
Leonard C., Chen Y., Mahillon J. Diversity and differential distribution of IS231, IS232 and IS240 among Bacillus cereus, Bacillus thuringiensis and Bacillus mycoides. Microbiology. 143:1997;2537-2547.
-
(1997)
Microbiology
, vol.143
, pp. 2537-2547
-
-
Leonard, C.1
Chen, Y.2
Mahillon, J.3
-
48
-
-
0029985398
-
Asymetric substitution patterns in the two DNA strands of bacteria
-
Lobry J.R. Asymetric substitution patterns in the two DNA strands of bacteria. Mol. Biol. Evol. 13:1996;660-665.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 660-665
-
-
Lobry, J.R.1
-
49
-
-
0031436942
-
Physical map of the Bacillus subtilis 166 genome
-
Itaya M. Physical map of the Bacillus subtilis 166 genome. Microbiology. 143:1997;3723-3732.
-
(1997)
Microbiology
, vol.143
, pp. 3723-3732
-
-
Itaya, M.1
-
50
-
-
0030953791
-
Experimental surgery to create subgenomes of Bacillus subtilis 168
-
Itaya M., Tanaka T. Experimental surgery to create subgenomes of Bacillus subtilis 168. Proc. Natl. Acad. Sci. USA. 94:1997;5378-5382.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 5378-5382
-
-
Itaya, M.1
Tanaka, T.2
-
51
-
-
0032897170
-
Fate of unstable Bacillus subtilis subgenome: Re-integration and amplification in the main genome
-
Itaya M., Tanaka T. Fate of unstable Bacillus subtilis subgenome: re-integration and amplification in the main genome. FEBS Lett. 448:1999;235-238.
-
(1999)
FEBS Lett.
, vol.448
, pp. 235-238
-
-
Itaya, M.1
Tanaka, T.2
-
52
-
-
0033135285
-
Eukaryotic DNA methylation as an evolutionary device
-
Colot V., Rossignol J.L. Eukaryotic DNA methylation as an evolutionary device. Bioessays. 21:1999;402-411.
-
(1999)
Bioessays
, vol.21
, pp. 402-411
-
-
Colot, V.1
Rossignol, J.L.2
-
53
-
-
0028322317
-
A small Bacillus cereus chromosome corresponds to one conserved region of a larger Bacillus cereus chromosome
-
Carlson C.R., Kolsto A.B. A small Bacillus cereus chromosome corresponds to one conserved region of a larger Bacillus cereus chromosome. Mol. Microbiol. 13:1994;161-169.
-
(1994)
Mol. Microbiol.
, vol.13
, pp. 161-169
-
-
Carlson, C.R.1
Kolsto, A.B.2
|