Novel phosphotransferase systems revealed by bacterial genome analysis: The complete repertoire of pts genes in Pseudomonas aeruginosa

Journal of Molecular Microbiology and Biotechnology

Volumn 1, Issue 2, 1999, Pages 289-293

  Reizer, Jonathan ^a   Reizer, Aiala ^a   Lagrou, Michelle J ^b   Folger, Kim R ^b   Stover, C Kendall ^b   Saier Jr , Milton H ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NOVARTIS PHARMA AG   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

PHOSPHOENOLPYRUVATE PROTEIN PHOSPHOTRANSFERASE; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE; PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE; PHOSPHOTRANSFERASE;

BACTERIAL GENOME; ENZYMOLOGY; GENETICS; HUMAN; MULTIGENE FAMILY; OPERON; PSEUDOMONAS AERUGINOSA; REVIEW;

GENOME, BACTERIAL; HUMANS; MULTIGENE FAMILY; OPERON; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE SYSTEM; PHOSPHOTRANSFERASES (NITROGENOUS GROUP ACCEPTOR); PSEUDOMONAS AERUGINOSA;

EID: 0033223391     PISSN: 14641801     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Short Survey

References (36)

1. Andersson, S.G.E., Zomorodipour, A., Andersson, J.A., Sicheritz-Pontén, T., Alsmark, U.C.M., Podowski, R.M., Näslund, Eriksson, A.-S., Winkler, H.H., and Kurland, C.G. 1998. The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature. 396: 133-140.
2. Aravind, L, and Ponting, C.P. 1997. The GAF domain: an evolutionary link between diverse phototransducing proteins. Trend. Biochem. Sci. 22:458-459.
3. Bateman, A. 1999. The SIS domain: a phosphosugar-binding domain. Trends Biochem. Sci. 24: 94-95.
4. Berlyn, M.K.B. 1998. Linkage map of Escherichia coli K-12, Edition 10: The traditional map. Microbiol. Mol. Biol. Rev. 62: 814-984.
5. Charbit, A., J. Reizer, and M.H. Saier, Jr. 1996. Function of the duplicated IIB domain and oligomeric structure of the fructose permease of Escherichia coli. J. Biol. Chem. 271: 9997-10003.
6. Churin, J., Hause, B., Feussner, I., Maucher, H.P., Feussner, K., Borner, T., and Wasternack, C. 1998. Cloning and expression of a new cDNA from monocotyledonous plants coding for a diadenosine 5′,5‴-P1, P4-tetraphosphate hydrolase from barley (Hordeum vulgare). FEBS Lett. 431: 481-485.
7. Cole, S.T., Brosch, R., Parkhill, J., Gamier, T., Churcher, C., Harris, D., Gordon, S.V., Eiglmeier, K., Gas, S., Barry, C.E., III et al. 1988. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature. 393: 537-544.
8. Conrad, R., and Schlegel, H.G. 1977. Different degradation pathways for glucose and fructose in Rhodopseudomonas capsulata. Arch. Microbiol. 112: 39-48.
9. de Crécy-Lagard, V., Bouvet, O.M.M., Lejeune, P., and Danchin, A. 1991. Fructose catabolism in Xanthomonas campestris pv. Campestris. Sequence of the PTS operon, characterization of the fructose-specific enzymes. J. Biol. Chem. 266: 18154-18161.
10. Durham, D.H., and P.V. Phibbs, Jr. 1982. Fractionation and characterization of the phosphoenolpyruvate: fructose 1-phosphotransferase system from Pseudomonas aeruginosa. J. Bacteriol. 149: 534-541.
11. Goebel, E.M. and Krieg, N.R. 1984. Fructose catabolism in Azospirillum brasilense and Azospirillum lipoferum. J. Bacteriol. 159: 86-92.
12. Gupta, K.D., and Ghosh, S. 1984. Identification of a phosphoenolpyruvate: fructose 1-phosphotransferase system in Azospirillum brasilense. J. Bacteriol. 160: 1204-1206.
13. Iwamoto, R., and Imanaga, Y. 1991. Direct evidence of the Entner-Doudoroff pathway operating in the metabolism of D-glucosamine in bacteria. J. Biochem. 109: 66-69.
14. Lessie, T.G., and Phibbs, P.V. Jr. 1984. Alternative pathways of carbohydrate utilization n Pseudomonas. Ann. Rev. Microbiol. 38: 359-387.
15. Maksel, D., Guranowski, A., Illgoutz, S.C., Moir, A., Blackburn, M.G., and Gayler, K.R. 1998. Cloning and expression of diadenosine 5′,5‴-P1, P4-tetraphosphate hydrolase from Lupinus angustifolius L. Biochem. J. 329: 313-319.
16. Phillips, A.T., and Mulfinger, L.M. 1981. Cyclic adenosine 3′,5′-monophosphate levels in Pseudomonas putida and Pseudomonas aeruginosa during induction and carbon catabolite repression of histidase synthesis.
17. Plumbridge, J. 1995. Co-ordinated regulation of amino sugar biosynthesis and degradation: the NagC repressor acts as both an activator and a represser for the transcription of the glmUS operon and requires two separated NagC binding sites. EMBO J. 14: 3958-3965.
18. Postma, P.W., Lengeler, J., and Jacobson, G.R. 1993. Phosphoenolpyruvate: carbohydrate phosphotransferase systems of bacteria. Microbiol. Rev. 57: 543-594.
19. ts mutant. J. Biol. Chem. 270: 4822-4839.
20. Ntr from Escherichia coli: A novel enzyme of the phosphoenolpyruvate-dependent phosphotransferase system exhibiting strict specificity for its phosphoryl acceptor, NPr. J. Biol. Chem. 274: 26185-26191.
21. nd ed. F.C. Neidhardt, R. Curtiss III, J.L. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikoff, M. Riley, M. Schaechter, and H.E. Umbarger, eds. ASM Press, Washington, D.C. p. 1035-1063.
22. Reizer, J., Ramseier, T.M., Charbit, A., Reizer, A., and Saier, M.H. Jr. 1996a. Novel phosphotransferase genes revealed by bacterial genome analysis: A gene cluster encoding a putative N-acetylgalactosamine metabolic pathway. Microbiol. 142: 231-250.
23. Reizer, J., and Reizer, A. 1996. A voyage along the bases: novel phosphotransferase genes revealed by in silico analyses of the Escherichia coli genome. Res. Microbiol. 147: 458-471.
24. Reizer, J., A. Reizer, Merrick, M.J., Plunkett, G., III, Rose, D.J., and Saier, M.H. Jr. 1996b. Novel phosphotransferase-encoding genes revealed by analysis of the Escherichia coli genome: A chimeric gene encoding an Enzyme I homologue that possesses a putative sensory transduction domain. Gene. 181: 103-108.
25. Reizer, J., Reizer, A., and Saier, M.H. Jr. 1995. Novel phosphotransferase system genes revealed by bacterial genome analysis - a gene cluster encoding a unique Enzyme I and the proteins of a fructose-like permease system. Microbiol. 141: 961-971.
26. Reizer, J., and Saier, M.H. Jr. 1997. Modular multidomain phosphoryl transfer proteins of bacteria. Curr. Opinion Struct. Biology. 7: 407-415.
27. Saier, M.H. Jr., and Ramseier, T.M. 1996. Thecatabolite repressor/activator (Cra) protein of enteric bacteria. J. Bacteriol. 178: 3411-3417.
28. nd ed. F.C. Neidhardt, R. Curtiss III, J.L. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikoff, M. Riley, M. Schaechter, and H.E. Umbarger, eds. ASM Press, Washington, D.C. p. 1325-1343.
29. Saier, M.H. Jr., and Reizer, J. 1992. Proposed uniform nomenclature for the proteins and protein domains of the bacterial phosphoenolpyruvate: sugar phosphotransferase system based on structural, evolutionary and functional considerations. J. Bacteriol. 174: 1433-1438.
30. Saier, M.H. Jr., and Reizer, J. 1994. The bacterial phosphotransferase system: New frontiers 30 years later. Mol. Microbiol. 13: 755-764.
31. Segura, D., and Espin, G. 1998. Mutational inactivation of a gene homologous to Escherichia coli ptsP affects poly-β-hydroxybutyrate accumulation and nitrogen fixation in Azotobacter vinelandii. J. Bacteriol. 180: 4790-4798.
32. Siegel, L.S., Hylemon, P.B., and Phibbs, P.V. Jr. 1977. Cyclic adenosine 3′,5′-monophosphate levels and activities of adenylate cyclase and cyclic adenosine 3′,5′-monophosphate phosphodiesterase in Pseudomonas and Bacteroides. J. Bacteriol. 129: 87-96.
33. Tan, M.-T, Rahme, L.G., Sternberg, J.A., Tompkins, R.G., and Ausubel, P.M. 1999. Pseudomonas aeruginosa killing of Caenorhabditis elegans used to identify P. aeruginosa virulence factors. Proc. Natl. Acad. Sci. USA. 96: 2408-2413.
34. nd ed. F.C. Neidhardt, R. Curtiss III, J.L. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikoff, M. Riley, M. Schaechter, and H.E. Umbarger, eds. ASM Press, Washington, D.C. p. 1025-1034.
35. Vogler, A.P., Trentmann, S., and Lengeier, J.W. 1989. Alternative route for biosynthesis of amino sugars in Escherichia coli K-12 mutants by means of a catabolic isomerase. J. Bacteriol. 171: 6586-6592.
36. Wu, L.-R, Tomich, J.M., and Saier, M.H., Jr. 1990. Structure and Evolution of a multidomain multiphosphoryl transfer protein. Nucleotide sequence of the fruB(HI) gene in Rhodobacter capsulatus and comparisons with homologous genes from other organisms. J. Mol. Biol. 213: 687-703.