Miocene Radiation of Deep-Sea Hydrothermal Vent Shrimp (Caridea: Bresiliidae): Evidence from Mitochondrial Cytochrome Oxidase Subunit I

Molecular Phylogenetics and Evolution

Volumn 13, Issue 2, 1999, Pages 244-254

  Shank, Timothy M ^a   Black, Michael B ^b   Halanych, Kenneth M ^a   Lutz, Richard A ^a   Vrijenhoek, Robert C ^a  

^a RUTGERS UNIVERSITY   (United States)

^b Marine Science Institute   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C OXIDASE; DNA;

ANIMAL; ARTICLE; CHEMISTRY; DECAPODA (CRUSTACEA); DNA SEQUENCE; ENZYMOLOGY; GENETICS; MITOCHONDRION; MOLECULAR EVOLUTION; PHYLOGENY; TIME;

ANIMALS; DECAPODA (CRUSTACEA); DNA; ELECTRON TRANSPORT COMPLEX IV; EVOLUTION, MOLECULAR; MITOCHONDRIA; PHYLOGENY; SEQUENCE ANALYSIS, DNA; TIME FACTORS;

EID: 0033217142     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1999.0642     Document Type: Article

References (51)

1. Black M. B. Molecular systematics of vestimentiferan tubeworms from hydrothermal vents and cold-water seeps. Mar. Biol. 130:1997;141-149.
2. Chace F. A. On the classification of the caridea (Decapoda). Crustaceana. 63:1992;70-80.
3. Craddock C. Evolutionary relationships among deep-sea mytilids (Bivalvia: Mytilidae) from hydrothermal vents and cold-water methane/sulfide seeps. Mar. Biol. 121:1995;477-485.
4. Crosnier A., Forest J. Les Crevettes Profondes de L'Atlantique Oriental Tropical. Faune Tropicale. 1973;O.R.S.T.O.M. Paris. p. 409.
5. de Saint Laurent M. Crustacea decapoda from the hydrothermal vents of the East Pacific Rise at 13°N, collected during the French Biocyatherm Expedition. C.R. Acad. Sci. Paris. 299:1984;355.
6. Douglas M. E., Endler J. A. Quantitative matrix comparisons in ecological and evolutionary investigations. J. Theoret. Biol. 99:1982;777-795.
7. Doyle J. J., Dickson E. Preservation of plant samples for DNA restriction endonuclease analysis. Taxon. 36:1987;715-722.
8. Felsenstein J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution. 39:1985;783-791.
9. Felsenstein, J. 1993, PHYLIP (phylogeny inference package). Version 3.5c, Department of Genetics, University of Washington, Seattle, WA.
10. Folmer O., Hoeh W. R., Black M. B., Vrijenhoek R. C. Conserved primers for PCR amplification of mitochondrial DNA from different invertebrate phyla. Mol. Mar. Biol. Biotech. 3:1994;294-299.
11. France S. C., Kocher T. D. DNA sequencing of formalin-fixed crustaceans from archival research collections. Mol. Mar. Biol. Biotech. 5:1996;304-313.
12. Gebruk A. V., Galkin S. V., Vereshchaka A. L., Moskalev L. I., Southward A. J. Ecology and biogeography of the hydrothermal vent fauna of theMid-Atlantic Ridge. Adv. Mar. Biol. 32:1997;94-143.
13. Geistdoerfer P., Auzende J. M., Batiza R., Bideau D., Cormier M., Fouquet Y. Hydrothermalisme et communautés animales associées sur la dorsale du Pacifique oriental entre 17°S et 19°S (campagne Naudur, décembre 1993). C. R. Acad. Sci. Paris. Série IIa:1995;47-54.
14. Halanych K. M., Robinson T. J. Phlogenetic relationships of cottontails (Sylvilagus, Lagomorpha): Congruence of 12S rDNA and cytogenetic data. Mol. Phylogenet. Evol. 7:1997;294-302.
15. Hasegawa M., Kishino H., Yano T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:1985;160-174.
16. Hecker B. Fauna from a cold sulfur seep in the Gulf of Mexico: Comparison with hydrothermal vent communities and evolutionary implications. Biol. Soc. Wash. Bull. 6:1985;465-474.
17. Holthuis L. B. The recent genera of the caridean and stenopodean shrimps (Class Crustacea, Order Decapoda, Supersection Natantia) with keys to their determination. Zool. Verhand. Leiden. 26:1955;1-57.
18. Juniper S. K., Tunnicliffe V., Desbruyères D. Regional-scale features of northeast Pacific, East Pacific Rise, and Gulf of Aden vent communities. McMurray G. R. Gorda Ridge: A Seafloor Spreading Center in the United States Exclusive Economic Zone. 1990;265-278 Springer-Verlag, New York.
19. Kikuchi T., Ohta S. Two caridean shrimps of the families Bresiliidae and Hippolytidae from a hydrothermal field on the Iheya Ridge, off the Ryukyu Islands, Japan. J. Crust. Biol. 15:1995;771-785.
20. Kishino H., Hasegawa M. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:1989;170-179.
21. Knowlton N., Weigt L. A., Solorzano L. A., Mills D. K., Bermingham E. Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the isthmus of Panama. Science. 260:1993;1629-1631.
22. Kumar, S, Tamura, K, and, Nei, M. 1993, Mega: Molecular Evolutionary Genetics Analysis, version 1.01, The Pennsylvania State University, University Park, PA.
23. Little C., Herrington R. J., Maslennikov V. V., Morris N. J., Zayko V. V. Silurian hydrothermal-vent community from the southern Urals, Russia. Nature. 385:1997;146-148.
24. Maddison, W. P, and, Maddison, D. R. 1992, MacClade: analysis of phylogeny and charcter evolution, Sinauer Associates, Sunderland, MA.
25. Martin J., Signorovitch J., Patel H. A new species of Rimicaris (Crustacea: Decapoda: Bresiliidae) from the Snake Pit hydrothermal vent field on the Mid-Atlantic Ridge. Proc. Biol. Soc. Wash. 110:1997;399-411.
26. Martin J. W., Christiansen J. C. A new species of the shrimp genus Chorocaris Martin and Hessler, 1990 (Crustacea: Decapoda: Bresiliidae) from hydrothermal vent fields along the Mid-Atlantic Ridge. Proc. Biol. Soc. Wash. 108:1995;220-227.
27. Martin J. W., Hessler R. R. Chorocaris vandoverae, a new genus and species of hydrothermal vent shrimp (Crustacea:Decapoda; Bresillidae) from the western Pacific. Contrib. Sci. Nat. Hist. Mus. L.A. County. 417:1990;1-11.
28. McLean J. H. Preliminary report on the limpets at hydrothermal vents. Biol. Soc. Wash. Bull. 6:1985;159-166.
29. Muse S. V., Gaut B. S. A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome. Mol. Biol. Evol. 11:1994;715-724.
30. Newman W. A. The abyssal hydrothermal vent invertebrate fauna, a glimpse of antiquity. Biol. Soc. Wash. Bull. 6:1985;231-242.
31. Olsen G. J., Matsuda H., Hagstrom R. FastDNAml: A tool for construction of phylogenetic trees from DNA sequences using maximum likelihood. Cabio. 10:1994;41-48.
32. Peek A. S., Gustafson R. G., Lutz R. A., Vrijenhoek R. C. Evolutionary relationships of deep-sea hydrothermal vent and cold-water seep clams (Bivalvia: Vesicomyidae): Results from mitochondrial cytochrome oxidase subunit I. Mar. Biol. 130:1997;151-161.
33. Rona P. A. Direct observations of Atlantic black smokers. EOS. 67:1986;1327.
34. Schram F. R. Caridea. Crustacea. 1986;Oxford Univ. Press, New York. p. 606.
35. Segonzac M., de Saint Laurent M., Casanova B. The enigma of the trophic behaviour of alvinocaridid shrimps from hydrothermal vent sites on the Mid-Atlantic Ridge. Cash. Biol. Mar. 34:1994;535-571.
36. Shank T. M., Lutz R. A., Vrijenhoek R. C. Molecular systematics of shrimp (Decapoda; Bresiliidae) from deep-sea hydrothermal vents: I. Enigmatic "small orange" shrimp from the Mid-Atlantic Ridge are juvenile Rimicaris exoculata. Mol. Mar. Biol. Biotech. 7:1998a;88-96.
37. Shank T. M., Fornari D. J., Von Damm K. V. D., Lilley M. D., Haymon R. H., Lutz R. A. Temporal and spatial development of nascent deep-sea hydrothermal vent communities at 9° 50'N (EPR). Deep-Sea Res. 45:1998b;465-515.
38. Shiozawa D. K., Kudo J., Evans R. P., Woodward S. R., Williams R. N. DNA extraction from preserved trout tissues. Great Britain Natur. 52:1992;29-34.
39. Swofford, D. L. 1993, PAUP: Phylogenetic Analysis Using Parsimony, Version 3.11, Computer program distributed by the, Illinois Natural History Survey, Champaign, IL.
40. Thompson J. R. The caridean superfamily Bresilioidea (Decapoda:Natantia). A revision and a discussion of its validity and affinities. Crustaceana. 11:1996;129-140.
41. Thompson J. D., Higgins D. G., Gibson T. J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673.
42. Tunnicliffe V., Fowler M. R. Influence of sea-floor spreading on the global hydrothermal vent fauna. Nature. 379:1996;531-533.
43. Tunnicliffe V. C., Fowler M. R., McArthur A. Plate tectonic history and hot vent biogeography. MacLeod C. J., Tyler P., Walker C. L. Tectonic, Magmatic, Hydrothermal and Biological Segmentation of Mid-Ocean Ridges. 1996;225-238.
44. Van Dover C. L. Ecology of Mid-Atlantic Ridge hydrothermal vents. MacLeod C. J., Tyler P., Walker C. L. Hydrothermal Vents and Processes. 1995;257-294.
45. Vereshchaka A. L. A new genus and species of caridean shrimp (Crustacea:Decapoda:Alvinocarididae) from north atlantic hydrothermal vents. J. Mar. Biol. Assn. U.K. 76:1996a;951-961.
46. Vereshchaka A. L. Comparative analysis of taxonomic composition of shrimps as edificators of hydrothermal communities in the Mid-Atlantic Ridge. Doklady Biol. Sci. 351:1996b;576-578.
47. Vereshchaka A. L. A new family for a deep-sea caridean shrimp from North Atlantic hydrothermal vents. J. Mar. Biol. Assn. U.K. 77:1997;425-438.
48. Williams A. B. New marine decapod crustaceans from waters influenced by hydrothermal discharge, brine, and hydrocarbon seepage. Fish. Bull. 86:1988;263-287.
49. Williams A. B., Dobbs F. C. A new genus and species of caridean shrimp (Crustacea:Decapoda:Bresiliidae) from hydrothermal vents on Loihi Seamount. Proc. Biol. Soc. Wash. 108:1995;228-237.
50. Williams A. B., Rona P. A. Two new caridean shrimps (Bresiliidae) from a hydrothermal vent field on the Mid-Atlantic Ridge. J. Crust. Biol. 6:1986;446-462.
51. Zarenkov N. A. Fauna of decapod crustaceans of American waters in the southern hemisphere. Sov. J. Mar. Biol. 2:1976;277-285.