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Volumn 40, Issue 4, 1999, Pages 679-686

Altering the 3' UTR endonucleolytic cleavage site of a Chlamydomonas chloroplast mRNA affects 3'-end maturation in vitro but not in vivo

Author keywords

atpB; Chlamydomonas reinhardtii; Chloroplast gene expression; mRNA processing

Indexed keywords

BIOLISTIC TRANSFORMATION; CHLOROPLAST; ENDONUCLEASE; IN VITRO STUDY; IN VIVO STUDY; MESSENGER RNA; MUTATION;

EID: 0033167046     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1006252201661     Document Type: Article
Times cited : (11)

References (33)
  • 1
    • 0024077065 scopus 로고
    • Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic RNAs
    • Barkan, A. 1988. Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic RNAs. EMBO J. 7: 2637-2644.
    • (1988) EMBO J. , vol.7 , pp. 2637-2644
    • Barkan, A.1
  • 2
    • 0027154270 scopus 로고
    • Functional in vivo analyses of the 3′ flanking sequences of the Chlamydomonas chloroplast rbcL and psaB genes
    • Blowers, A.D., Klein, U., Ellmore, G.S. and Bogorad, L. 1993. Functional in vivo analyses of the 3′ flanking sequences of the Chlamydomonas chloroplast rbcL and psaB genes. Mol. Gen. Genet. 238: 339-349.
    • (1993) Mol. Gen. Genet. , vol.238 , pp. 339-349
    • Blowers, A.D.1    Klein, U.2    Ellmore, G.S.3    Bogorad, L.4
  • 3
    • 0026344374 scopus 로고
    • Specific ribonuclease activities in spinach chloroplasts promote mRNA maturation and degradation
    • Chen, H. and Stern, D.B. 1991. Specific ribonuclease activities in spinach chloroplasts promote mRNA maturation and degradation. J. Biol. Chem. 266: 24205-24211.
    • (1991) J. Biol. Chem. , vol.266 , pp. 24205-24211
    • Chen, H.1    Stern, D.B.2
  • 4
    • 0031000662 scopus 로고    scopus 로고
    • RNase E: Still a wonderfully mysterious enzyme
    • Cohen, S. and McDowall, K. 1997. RNase E: still a wonderfully mysterious enzyme. Mol. Microbiol. 23: 1099-1106.
    • (1997) Mol. Microbiol. , vol.23 , pp. 1099-1106
    • Cohen, S.1    McDowall, K.2
  • 5
    • 0002921331 scopus 로고    scopus 로고
    • Chloroplast RNA synthesis and processing
    • J.-D. Rochaix, M. Goldschmidt-Clermont and S. Merchant (Eds.), Kluwer Academic Publishers, Dordrecht, Netherlands
    • Drager, R.G. and Stern, D.B. 1998. Chloroplast RNA synthesis and processing. In: J.-D. Rochaix, M. Goldschmidt-Clermont and S. Merchant (Eds.), Molecular Biology of Chlamydomonas: Chloroplasts and Mitochondria. Kluwer Academic Publishers, Dordrecht, Netherlands, pp. 125-140.
    • (1998) Molecular Biology of Chlamydomonas: Chloroplasts and Mitochondria , pp. 125-140
    • Drager, R.G.1    Stern, D.B.2
  • 6
    • 0029853427 scopus 로고    scopus 로고
    • A chloroplast transcript lacking the 3′ inverted repeat is degraded by 3′ → 5′ exoribonuclease activity
    • Drager, R.G., Zeidler, M., Simpson, C.L. and Stern, D.B. 1996. A chloroplast transcript lacking the 3′ inverted repeat is degraded by 3′ → 5′ exoribonuclease activity. RNA 2: 652-663.
    • (1996) RNA , vol.2 , pp. 652-663
    • Drager, R.G.1    Zeidler, M.2    Simpson, C.L.3    Stern, D.B.4
  • 7
    • 0031910348 scopus 로고    scopus 로고
    • In vivo evidence for 5′ to 3′ exoribonuclease degradation of an unstable chloroplast mRNA
    • Drager, R.G., Girard-Bascou, J., Choquet, Y., Kindle, K.L. and Stern, D.B. 1998. In vivo evidence for 5′ to 3′ exoribonuclease degradation of an unstable chloroplast mRNA. Plant J. 13: 85-96.
    • (1998) Plant J. , vol.13 , pp. 85-96
    • Drager, R.G.1    Girard-Bascou, J.2    Choquet, Y.3    Kindle, K.L.4    Stern, D.B.5
  • 8
    • 0026559344 scopus 로고
    • Specificity of Escherichia coli endoribonuclease RNase E: In vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site
    • Ehretsmann, C.P., Carpousis, A.J. and Krisch, H.M. 1992. Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site. Genes Dev. 6: 149-159.
    • (1992) Genes Dev. , vol.6 , pp. 149-159
    • Ehretsmann, C.P.1    Carpousis, A.J.2    Krisch, H.M.3
  • 9
    • 0002030337 scopus 로고
    • Control of mRNA degradation in organelles
    • G. Brawerman and J. Belasco (Eds.), Academic Press, Orlando, FL
    • Gruissem, W. and Schuster, G. 1993. Control of mRNA degradation in organelles. In: G. Brawerman and J. Belasco (Eds.), Control of Messenger RNA Stability. Academic Press, Orlando, FL, pp. 329-365.
    • (1993) Control of Messenger RNA Stability , pp. 329-365
    • Gruissem, W.1    Schuster, G.2
  • 10
    • 0029917715 scopus 로고    scopus 로고
    • Chloroplast mRNA 3′-end processing by a high molecular weight protein complex is regulated by nuclear encoded RNA binding proteins
    • Hayes, R., Kudla, J., Schuster, G., Gabay, L., Maliga, P. and Gruissem, W. 1996. Chloroplast mRNA 3′-end processing by a high molecular weight protein complex is regulated by nuclear encoded RNA binding proteins. EMBO J. 15: 1132-1141.
    • (1996) EMBO J. , vol.15 , pp. 1132-1141
    • Hayes, R.1    Kudla, J.2    Schuster, G.3    Gabay, L.4    Maliga, P.5    Gruissem, W.6
  • 11
    • 0030468099 scopus 로고    scopus 로고
    • Polyadenylation accelerates degradation of chloroplast mRNA
    • Kudla, J., Hayes, R. and Gruissem, W. 1996. Polyadenylation accelerates degradation of chloroplast mRNA. EMBO J. 15: 7137-7146.
    • (1996) EMBO J. , vol.15 , pp. 7137-7146
    • Kudla, J.1    Hayes, R.2    Gruissem, W.3
  • 12
    • 0029061736 scopus 로고
    • Phosphorylation of a chloroplast RNA-binding protein changes the affinity to RNA
    • Lisitsky, I. and Schuster, G. 1995. Phosphorylation of a chloroplast RNA-binding protein changes the affinity to RNA. Nucl. Acids Res. 23: 2506-2511.
    • (1995) Nucl. Acids Res. , vol.23 , pp. 2506-2511
    • Lisitsky, I.1    Schuster, G.2
  • 13
    • 0029168784 scopus 로고
    • RNA-binding characteristics of a ribonucleoprotein from spinach chloroplast
    • Lisitsky, I., Liveanu, V. and Schuster, G. 1995. RNA-binding characteristics of a ribonucleoprotein from spinach chloroplast. Plant Physiol. 107: 933-941.
    • (1995) Plant Physiol. , vol.107 , pp. 933-941
    • Lisitsky, I.1    Liveanu, V.2    Schuster, G.3
  • 14
    • 0029828944 scopus 로고    scopus 로고
    • Addition of poly(A)-rich sequences to endonucleolytic cleavage sites in the degradation of spinach chloroplast mRNA
    • Lisitsky, I., Klaff, P. and Schuster, G. 1996. Addition of poly(A)-rich sequences to endonucleolytic cleavage sites in the degradation of spinach chloroplast mRNA. Proc. Natl. Acad. Sci. USA 93: 13398-13403.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 13398-13403
    • Lisitsky, I.1    Klaff, P.2    Schuster, G.3
  • 15
    • 0030748658 scopus 로고    scopus 로고
    • The mechanism of preferential degradation of polyadenylated RNA in the chloroplast: The exoribonuclease 100RNP/PNPase displays high binding affinity for poly(A) sequence
    • Lisitsky, I., Kotler, A. and Schuster, G. 1997. The mechanism of preferential degradation of polyadenylated RNA in the chloroplast: the exoribonuclease 100RNP/PNPase displays high binding affinity for poly(A) sequence. J. Biol. Chem. 272: 17648-17653.
    • (1997) J. Biol. Chem. , vol.272 , pp. 17648-17653
    • Lisitsky, I.1    Kotler, A.2    Schuster, G.3
  • 16
    • 0032531768 scopus 로고    scopus 로고
    • Ribonuclease e is a 5′-end-dependent endonuclease
    • Mackie, G.A. 1998. Ribonuclease E is a 5′-end-dependent endonuclease. Nature 395: 720-723.
    • (1998) Nature , vol.395 , pp. 720-723
    • Mackie, G.A.1
  • 17
    • 0022098923 scopus 로고
    • Maturation of Escherichia coli tryptophan operon mRNA: Evidence for 3′-exonucleolytic processing after rho-dependent termination
    • Mott, J.E., Galloway, J.L. and Platt, T. 1985. Maturation of Escherichia coli tryptophan operon mRNA: evidence for 3′-exonucleolytic processing after rho-dependent termination. EMBO J. 4: 1887-1891.
    • (1985) EMBO J. , vol.4 , pp. 1887-1891
    • Mott, J.E.1    Galloway, J.L.2    Platt, T.3
  • 18
    • 0027582419 scopus 로고
    • The 54 kDa RNA-binding protein from mustard chloroplasts mediates endonucleolytic transcript 3′ end formation in vitro
    • Nickelsen, J. and Link, G. 1993. The 54 kDa RNA-binding protein from mustard chloroplasts mediates endonucleolytic transcript 3′ end formation in vitro. Plant J. 3: 537-544.
    • (1993) Plant J. , vol.3 , pp. 537-544
    • Nickelsen, J.1    Link, G.2
  • 19
    • 0029999945 scopus 로고    scopus 로고
    • The 3′ untranslated regions of chloroplast genes in Chlamydomonas reinhardtii do not serve as efficient transcriptional terminators
    • Rott, R., Drager, R.G., Stern, D.B. and Schuster, G. 1996. The 3′ untranslated regions of chloroplast genes in Chlamydomonas reinhardtii do not serve as efficient transcriptional terminators. Mol. Gen. Genet. 252: 676-683.
    • (1996) Mol. Gen. Genet. , vol.252 , pp. 676-683
    • Rott, R.1    Drager, R.G.2    Stern, D.B.3    Schuster, G.4
  • 20
    • 0031830328 scopus 로고    scopus 로고
    • 3′-processed mRNA is preferentially translated in Chlamydomonas reinhardtii chloroplast
    • Rott, R., Levy, H., Drager, R., Stern, D. and Schuster, G. 1998a. 3′-processed mRNA is preferentially translated in Chlamydomonas reinhardtii chloroplast. Mol. Cell Biol. 18: 4605-4611.
    • (1998) Mol. Cell Biol. , vol.18 , pp. 4605-4611
    • Rott, R.1    Levy, H.2    Drager, R.3    Stern, D.4    Schuster, G.5
  • 21
    • 0031908610 scopus 로고
    • The sequence and structure of the 3′ untranslated regions of chloroplast transcripts are important determinants of mRNA accumulation and stability
    • Rott, R., Liveanu, V., Drager, R.G., Stern, D.B. and Schuster, G. 1988b. The sequence and structure of the 3′ untranslated regions of chloroplast transcripts are important determinants of mRNA accumulation and stability. Plant Mol. Biol. 36: 307-314.
    • (1988) Plant Mol. Biol. , vol.36 , pp. 307-314
    • Rott, R.1    Liveanu, V.2    Drager, R.G.3    Stern, D.B.4    Schuster, G.5
  • 22
    • 0027999209 scopus 로고
    • PetD mRNA maturation in Chlamydomonas reinhardtii chloroplasts: The role of 5′ endonucleolytic processing
    • Sakamoto, W., Sturm, N.R., Kindle, K.L. and Stern, D.B. 1994. petD mRNA maturation in Chlamydomonas reinhardtii chloroplasts: the role of 5′ endonucleolytic processing. Mol. Cell. Biol. 14 : 6180-6186.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 6180-6186
    • Sakamoto, W.1    Sturm, N.R.2    Kindle, K.L.3    Stern, D.B.4
  • 23
    • 0025775279 scopus 로고
    • Chloroplast mRNA 3′ end processing requires a nuclear-encoded RNA-binding protein
    • Schuster, G. and Gruissem, W. 1991. Chloroplast mRNA 3′ end processing requires a nuclear-encoded RNA-binding protein. EMBO J. 10: 1493-1502.
    • (1991) EMBO J. , vol.10 , pp. 1493-1502
    • Schuster, G.1    Gruissem, W.2
  • 24
    • 0024917147 scopus 로고
    • Chloroplast mRNA 3′ end maturation is biochemically distinct from prokaryotic mRNA processing
    • 1989
    • Stern, D.B. and Gruissem, W. 1989. Chloroplast mRNA 3′ end maturation is biochemically distinct from prokaryotic mRNA processing. Plant Mol. Biol. 13: 615-625 (1989).
    • (1989) Plant Mol. Biol. , vol.13 , pp. 615-625
    • Stern, D.B.1    Gruissem, W.2
  • 25
    • 0023663880 scopus 로고
    • Control of plastid gene expression: 3′ inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription
    • Stern, D.B. and Gruissem, W. 1987. Control of plastid gene expression: 3′ inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription. Cell 51: 1145-1157.
    • (1987) Cell , vol.51 , pp. 1145-1157
    • Stern, D.B.1    Gruissem, W.2
  • 26
    • 0027479546 scopus 로고
    • 3′ end maturation of the Chlamydomonas reinhardtii chloroplast atpB mRNA is a two-step process
    • Stern, D.B. and Kindle, K.L. 1993. 3′ end maturation of the Chlamydomonas reinhardtii chloroplast atpB mRNA is a two-step process. Mol. Cell. Biol. 13: 2277-2285.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 2277-2285
    • Stern, D.B.1    Kindle, K.L.2
  • 27
    • 0024962578 scopus 로고
    • Function of plastid mRNA 3′ inverted repeats: RNA stabilization and gene-specific protein binding
    • Stern, D.B., Jones, H. and Gruissem, W. 1989. Function of plastid mRNA 3′ inverted repeats: RNA stabilization and gene-specific protein binding. J. Biol. Chem. 264: 18742-18750.
    • (1989) J. Biol. Chem. , vol.264 , pp. 18742-18750
    • Stern, D.B.1    Jones, H.2    Gruissem, W.3
  • 28
    • 0026116211 scopus 로고
    • A 3′ stem/loop structure of the Chlamydomonas chloroplast atpB gene regulates mRNA accumulation in vivo
    • Stern, D.B., Radwanski, E.R. and Kindle, K.L. 1991. A 3′ stem/loop structure of the Chlamydomonas chloroplast atpB gene regulates mRNA accumulation in vivo. Plant Cell 3: 285-297.
    • (1991) Plant Cell , vol.3 , pp. 285-297
    • Stern, D.B.1    Radwanski, E.R.2    Kindle, K.L.3
  • 29
    • 0026635941 scopus 로고
    • The biochemistry of 3′-end cleavage and polyadenylation of messenger RNA precursors
    • Wahle, E. and Keller, W. 1992. The biochemistry of 3′-end cleavage and polyadenylation of messenger RNA precursors. Annu. Rev. Biochem. 61: 419-440.
    • (1992) Annu. Rev. Biochem. , vol.61 , pp. 419-440
    • Wahle, E.1    Keller, W.2
  • 30
    • 0023953590 scopus 로고
    • Complex RNA maturation in chloroplasts: The psbB operon from spinach
    • Westhoff, P. and Herrmann, R.G. 1988. Complex RNA maturation in chloroplasts: the psbB operon from spinach. Eur. J. Biochem. 171: 551-564.
    • (1988) Eur. J. Biochem. , vol.171 , pp. 551-564
    • Westhoff, P.1    Herrmann, R.G.2
  • 31
    • 0022497184 scopus 로고
    • The sequence of the chloroplast atpB gene and its flanking regions in Chlamydomonas reinhardtii
    • Woessner, J.P., Gillham, N.W. and Boynton, J.E. 1986. The sequence of the chloroplast atpB gene and its flanking regions in Chlamydomonas reinhardtii. Gene 44: 17-28.
    • (1986) Gene , vol.44 , pp. 17-28
    • Woessner, J.P.1    Gillham, N.W.2    Boynton, J.E.3
  • 32
    • 0031007946 scopus 로고    scopus 로고
    • The spinach chloroplast endoribonuclease CSP41 cleaves the 3′-untranslated region of petD mRNA primarily within its terminal stem-loop structure
    • Yang, J. and Stern, D.B. 1997. The spinach chloroplast endoribonuclease CSP41 cleaves the 3′-untranslated region of petD mRNA primarily within its terminal stem-loop structure. J. Biol. Chem. 272: 12874-12880.
    • (1997) J. Biol. Chem. , vol.272 , pp. 12874-12880
    • Yang, J.1    Stern, D.B.2
  • 33
    • 0030221344 scopus 로고    scopus 로고
    • CSP41, a sequence-specific chloroplast mRNA binding protein, is an endoribonuclease
    • Yang, J., Schuster, G. and Stern, D.B. 1996. CSP41, a sequence-specific chloroplast mRNA binding protein, is an endoribonuclease. Plant Cell 8: 1409-1420.
    • (1996) Plant Cell , vol.8 , pp. 1409-1420
    • Yang, J.1    Schuster, G.2    Stern, D.B.3


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