Genes and other samples of DNA sequence data for phylogenetic inference

Biological Bulletin

Volumn 196, Issue 3, 1999, Pages 345-350

  Cummings, Michael P ^a,d   Otto, Sarah P ^b   Wakeley, John ^c,e  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^c RUTGERS UNIVERSITY   (United States)

^d MARINE BIOLOGICAL LABORATORY   (United States)

^e HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA ANALYSIS; PHYLOGENETIC ANALYSIS;

EID: 0033153406     PISSN: 00063185     EISSN: None     Source Type: Journal    
DOI: 10.2307/1542967     Document Type: Conference Paper

References (7)

1. Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
2. Fitch, W. M. 1971. Toward defining the course of evolution: minimal change for a specific tree topology. Syst. Biol. 20: 406-416.
3. Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
4. Cummings, M. P., S. P. Otto, and J. Wakeley. 1995. Sampling properties of DNA sequence data in phylogenetic analysis. Mol. Biol. Evol. 12: 814-822.
5. Otto, S. P., M. P. Cummings, and J. Wakeley. 1996. Inferring phylogenies from DNA sequence data: the effects of sampling. Pp. 103-115 in New Uses for New Phylogenies, P. H. Harvey, A. J. Leigh Brown, J. Maynard Smith, and S. Nee, eds. Oxford University Press.
6. Efron, B. 1979. Bootstrap methods: another look at the jacknife. Ann. Statist. 7: 1-26.
7. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.