Randomly amplified polymorphic DNA differs with burrowing nematode collection site, but not with host range

Journal of Nematology

Volumn 31, Issue 2, 1999, Pages 232-239

  Marin, D H ^a,c   Kaplan, D T ^b   Opperman, C H ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c University of Costa Rica   (Costa Rica)

Author keywords

Banana; Biogeography; Citrus; Genetic diversity; Molecular biology; Musa; Nematode; Radopholus; RAPD

Indexed keywords

EID: 0033145375     PISSN: 0022300X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (40)

1. Bakker, J., and F. I. Gommers. 1994. Inter- and Intraspecific variation between populations of Globodera rostochiensis and G. pallida revealed by random amplified polymorphic DNA. Phytopathology 84:807-811.
2. Blok, V. C., M. S. Phillips, J. W. McNicol, and M. Fargette. 1997. Genetic variation in tropical Meloidogyne spp. as shown by RAPDs. Fundamental and Applied Nematology 20:127-133.
3. Bridge, J. 1993. Worldwide distribution of the major nematode parasites of bananas and plantains. Pp. 185-198, in C. S. Gold and B. Giemmill, eds. Biological and integrated control of highland banana and plantain pests and diseases. Ibadan, Nigeria: International Institute of Tropical Agriculture.
4. Burrows, P. R., P. D. Halford, and K. Evans. 1996. Estimation of genomic variation between British populations of the potato cyst nematode Globodera pallida using RAPD-PCR. Molecular Ecology 5:697-701.
5. Caswell-Chen, E. P., V. M. Williamson, and F. F. Wu. 1992. Random amplified polymorphic DNA analysis of Heterodera cruciferae and H. schachtii populations. Journal of Nematology 24:343-351.
6. Digby, P. G. N., and R. A. Kempton. 1987. Multivariate analysis of ecological communities. London: Chapman and Hall.
7. DuCharme, E. P., and W. Birchfield. 1956. Physiologic races of the burrowing nematode. Phytopathology 46:615-616.
8. Edwards, K., C. Johnstone, and C. Thompson. 1991. A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Research 19:1349.
9. Fallas, G. A., M. L. Halm, M. Fargette, P. R. Burrows, and J. L. Sarah. 1996. Molecular and biochemical diversity among isolates of Radopholus spp. from different areas of the world. Journal of Nematology 28:422-430.
10. Ferris, V. R., J. M. Ferris, and J. Faghihi. 1993. Variation in spacer ribosomal DNA in some cyst-forming species of plant-parasitic nematodes. Fundamental and Applied Nematology 16:177.
11. Gowen, S. R. 1979. Some considerations of problems associated with the nematode pests of bananas. Nematropica 9:79-91.
12. Gowen, S. R., and P. Queneherve. 1990. Nematode parasites of bananas, plantains, and abaca. Pp. 431-460 in M. Luc, R. A. Sikora, and J. Bridge, eds. Plant-parasitic nematodes in subtropical and tropical Agriculture. Wallingford, UK: CAB International.
13. Hahn, M. L., P. R. Burrows, J. Bridge, and D. J. Wright. 1995. Prospects of correlation between RAPD patterns and pathogenicity in burrowing nematodes. Nematologica 41:305-306 (abstr.).
14. Hahn, M. L., P. R. Burrows, N. C. Gnanapragasam, J. Bridge, N. J. Vines, and D. J. Wright. 1994. Molecular diversity amongst Radopholus similis populations from Sri Lanka detected by RAPD analysis. Fundamental and Applied Nematology 17:275-281.
15. Hahn, M. L., P. R. Burrows, and D. J. Wright. 1996a. Genomic diversity between Radopholus similis populations from around the world detected by RAPD-PCR analysis. Nematologica 42:537-545.
16. Hahn, M. L., J. L. Sarah, M. Boisseau, N. J. Vines, D. J. Wright, and P. R. Burrows. 1996b. Reproductive fitness and pathogenicity of selected Radopholus populations on two cultivars. Plant Pathology 45:223-231.
17. Huettel, R. N., D. W. Dickson, and D. T. Kaplan. 1984. Radopholus citrophilus sp. n. (Nematoda), a sibling species of Radopholus similis. Proceedings of the Helminthological Society of Washington 51:32-35.
18. Kaplan, D. T. 1994a. An assay to estimate citrus rootstock resistance to burrowing nematodes. Proceedings of the Florida State Horticultural Society 107:85-89.
19. Kaplan, D. T. 1994b. Molecular characterization of the burrowing nematode sibling species, Radopholus citrophilus and R. similis. Pp. 77-83 in F. Lamberti, C. DeGiorgi, and D. M. Bird. Advances in molecular plant nematology. New York: Plenum Press.
20. Kaplan, D. T., and E. L. Davis. 1990. Improved nematode extraction from carrot disk culture. Journal of Nematology 22:399-406.
21. Kaplan, D. T., and C. H. Opperman. 1997. Genome similarity implies that citrus-parasitic burrowing nematodes do not represent a unique species. Journal of Nematology 29:430-440.
22. Kaplan, D. T., M. C. Vanderspool, C. Garrett, S. Chang, and C. H. Opperman. 1996. Molecular polymorphisms associated with host range in the highly conserved genomes of burrowing nematodes, Radopholus spp. Molecular Plant-Microbe Interactions 9:32-38.
23. Kaplan, D. T., M. C. Vanderspool, and C. H. Opperman. 1997. Sequence tag site and host range assays demonstrate that Radopholus similis and R. citrophilus are not reproductively isolated. Journal of Nematology 29: 421-429.
24. Lopez-Brana, I., M. D. Romero, and A. Delibes. 1996. Analysis of Heterodera avenae populations by the random amplified polymorphic DNA technique. Genome 39: 118-122.
25. Marin, D. H., K. R. Barker, D. T. Kaplan, T. B. Sutton, and C. H. Opperman. 1999. Aggressiveness and damage potential of Central American and Caribbean populations of Radopholus spp. in banana. Journal of Nematology, in press.
26. Marin, D. H., T. B. Sutton, and K. R. Barker. 1998. Dissemination of bananas in Latin America and the Caribbean and its relationship to the occurrence of Radopholus similis. Plant Disease 82:964-974.
27. O'Bannon, J. H. and A. L. Taylor. 1968. Migratory endoparasitic nematodes reared on carrot disks. Phytopathology 58:385.
28. Pinochet, J. 1988. Nematode problems in Musa spp.: Pathotypes of R. similis and breeding for resistance. Pp. 66-70 in Nematodes and the borer weevil in bananas: Present status of research and outlook. Proceedings of a workshop held in Bujumbura, Burundi, 7-11 December 1987. Montpellier, France: INIBAP.
29. Pinochet, J. 1992. Breeding bananas for resistance against lesion-forming nematodes. Pp. 157-169 in F. J. Gommers and P. W. T. Maas, eds. Nematology from molecule to ecosystem. Dundee, UK: European Society of Nematologists.
30. Pinochet, J. 1996. Review of past research on germplasm and nematode interactions. Pp. 32-44 in E. A. Frison, J. P. Horry, and D. DeWaele, eds. New frontiers in resistance breeding for nematodes, Fusarium, and Sigatoka. Montpellier, France: INIBAP.
31. Reynolds, P. K. 1927. The banana: Its history, cultivation, and place among staple foods. Cambridge, MA: Houghton Mifflin.
32. Sarah, J. L., and G. Fallas. 1996. Biological, biochemical, and molecular diversity of Radopholus similis. Pp. 50-57 in E. A. Frison, J. P. Horry, and D. DeWaele, eds. New frontiers in resistance breeding for nematodes, Fusarium, and Sigatoka. Montpellier, France: INIBAP.
33. Sarah, J. L., C. Sabatini, and M. Boisseau. 1993. Differences in pathogenicity to banana (Musa sp. cv. Poyo) among isolates of Radopholus similis from different production areas of the world. Nematropica 23:75-79.
34. Sher, S. A. 1968. Revision of the genus Radopholus Thorne, 1949 (Nematoda: Tylenchoidea). Proceedings of the Helminthological Society of Washington 35:219-237.
35. Simmonds, N. W. 1959. Bananas. London: Longmans, Green.
36. Stover, R. H., and N. W. Simmonds. 1987. Bananas. 3rd ed. London: Longman Scientific and Technical.
37. Tarte, R., J. Pinochet, C. Gabrielli, and O. Ventura. 1981. Differences in population increase, host preferences, and frequency of morphological variants among isolates of the banana race of Radopholus similis. Nematropica 11:43-52.
38. Valette, C., D. Mounport, M. Nicole, J. L. Sarah, and P. Baujard. 1998. Scanning electron microscope study of two African populations of Radopholus similis (Nematoda: Pratylenchidae) and proposal of R. citrophilus as a junior synonym of R. similis. Fundamental and Applied Nematology 21:139-146.
39. Welsh, J., and M. McClelland. 1990. Fingerprinting genomes with PCR using arbitrary primers. Nucleic Acids Research 18:7213-7218.
40. Williams, J. G. K., A. R. Kubelik, K. J. Livak, J. A. Rafalski, and S. V. Tingey. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18:6531-6535.