Identification of Spin Diffusion Pathways in Isotopically Labeled Biomolecules

Journal of Magnetic Resonance

Volumn 138, Issue 2, 1999, Pages 330-333

  Eykyn, Thomas R ^a   Früh, Dominique ^a   Bodenhausen, Geoffrey ^a,b  

^a UNIVERSITY OF LAUSANNE   (Switzerland)

^b ECOLE NORMALE SUPÉRIEURE   (France)

Author keywords

Average Liouvillian theory; Protein NMR; Selective NOE; Spin diffusion

Indexed keywords

NITROGEN; UBIQUITIN;

ARTICLE; CHEMISTRY; DIFFUSION; HUMAN; MATHEMATICS; METHODOLOGY; NUCLEAR MAGNETIC RESONANCE; PROTEIN CONFORMATION; SPIN LABELING;

DIFFUSION; HUMANS; MATHEMATICS; NITROGEN ISOTOPES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN CONFORMATION; SPIN LABELS; UBIQUITINS;

EID: 0033144287     PISSN: 10907807     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmre.1999.1736     Document Type: Editorial

References (19)

1. J. Cavanagh, W. J. Fairbrother, A. G. Palmer III, and N. J. Skelton, "Protein NMR Spectroscopy: Principles and Practice," Academic Press, New York (1996).
2. W. Massefski Jr. and A. G. Redfield, Elimination of multiple-step spin diffusion effects in two-dimensional NOE spectroscopy of nucleic acids, J. Magn. Reson. 78, 150-155 (1988).
3. S. Macura, J. Fejzo, C. G. Hoogstraten, W. M. Westler, and J. L. Markley, Topological editing of cross-relaxation networks, Isr. J. Chem. 32, 245-256 (1992).
4. C. G. Hoogstraten, W. M. Westler, S. Macura, and J. L. Markley, Improved measurement of longer proton-proton distances in proteins by relaxation network editing, J. Magn. Reson. B 102, 232-235 (1993).
5. C. Zwahlen, S. J. F. Vincent, L. Di Bari, M. H. Levitt, and G. Bodenhausen, Quenching spin diffusion in selective measurements of transient Overhauser effects in nuclear magnetic resonance. Applications to oligonucleotides, J. Am. Chem. Soc. 116, 362-368 (1994).
6. Z. Zolnai, N. Juranic, J. L. Markley, and S. Macura, Magnetization exchange network editing: Mathematical principles and experimental demonstration, Chem. Phys. 200, 161-179 (1995).
7. S. J. F. Vincent, C. Zwahlen, and G. Bodenhausen, Suppression of spin diffusion in selected frequency bands of nuclear Overhauser spectra, J. Biomol. NMR 7, 169 (1996).
8. + bound to lactate dehydrogenase determined by nuclear magnetic resonance with suppression of spin diffusion, Proc. Natl. Acad. Sci. USA 94, 4383 (1997).
9. C. G. Hoogstraten and A. Pardi, Improved distance analysis in RNA using network-editing techniques for overcoming errors due to spin diffusion, J. Biomol. NMR 11, 85 (1998).
10. N. Juranic, Z. Zolnai, and S. Macura, Identification of spin diffusion pathways in proteins by isotope-assisted NMR cross-relaxation network editing, J. Biomol. NMR 9, 317-322 (1997).
11. E. Chiarparin, P. Pelupessy, B. Cutting, T. R. Eykyn, and G. Bodenhausen, Normalized one-dimensional NOE measurements in isotopically labeled macromolecules using two-way cross-polarization, J. Biomol. NMR 13, 61-65 (1999).
12. M. H. Levitt and L. Di Bari, Steady state in magnetic resonance pulse experiments, Phys. Rev. Lett. 69, 3124-3127 (1992).
13. M. H. Levitt and L. Di Bari, The homogeneous master equation and the manipulation of relaxation networks, Bull. Magn. Reson. 16, 94-114 (1994).
14. R. Ghose, T. R. Eykyn, and G. Bodenhausen, Average Liouvillian theory revisited: Cross correlated relaxation between chemical shift anisotropy and dipolar couplings in the rotating frame in nuclear magnetic resonance, Mol. Phys., in press (1999).
15. M. Schwager and G. Bodenhausen, Quantitative determination of cross-relaxation rates in NMR using selective pulses to inhibit spin diffusion, J. Magn. Reson. B 111, 40-49 (1996).
16. D. Marion, M. Ikura, and A. Bax, Improved solvent suppression in one- and two-dimensional NMR spectra by convolution of time-domain data, J. Magn. Reson. 84, 425-430 (1989).
17. H. Geen and R. Freeman, Band-selective radiofrequency pulses, J. Magn. Reson. 93, 93-141 (1991).
18. T. R. Eykyn, R. Ghose, and G. Bodenhausen, Offset profiles of selective pulses in isotopically labeled macromolecules, J. Magn. Reson. 136, 211-213 (1999).
19. S. Vijay-Kumar, C. E. Bugg, and W. J. Cook, Structure of ubiquitin refined at 1.8 Å resolution, J. Mol. Biol. 194, 531-544 (1987).