Alternative transcription initiation sites generate two LCA1 Ca2+-ATPase mRNA transcripts in tomato roots

Plant Molecular Biology

Volumn 40, Issue 1, 1999, Pages 133-140

  Navarro Avino, Juan P ^b   Hentzen, Audrey E ^c   Bennett, Alan B ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Ciudad Politécnica de la Innovación   (Spain)

^c ILLINOIS STATE UNIVERSITY   (United States)

Author keywords

Ca2+ ATPase; Calcium translocating adenosine triphosphate hydrolase; Endoplasmic reticulum; Plasma membrane; Sarcoplasmic endoplasmic reticulum

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ALTERNATIVE RNA SPLICING; CDNA LIBRARY; CLONE; COMPLEMENTARY DNA; INTRON; MESSENGER RNA; MOLECULAR SIZE; NUCLEASE; PLANT GENETICS; RNA ANALYSIS; SEQUENCE ANALYSIS; TOMATO; TRANSCRIPTION INITIATION;

LYCOPERSICON ESCULENTUM;

EID: 0033136488     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1026410414091     Document Type: Article

References (53)

1. +-ATPase in rat kidney. Am. J. Physiol. 265: F792-F801.
2. Ausubel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidman, J.G., Smith, J.A. and Strahl, K. (Eds.). 1990. Current Protocols in Molecular Biology, 8th ed., John Wiley, Boston.
3. 2+ATPase of sarcoplasmic reticulum. Expression in developing skeletal muscle. J. Biol. Chem. 262: 3768-3774.
4. 2+ ATPase genes: homologies and mechanistic implications of deduced amino acid sequences. Cell 44: 597-607.
5. Brandt, P., Neve, R.L., Kammesheidt, A., Rhoads, R.E. and Vanaman, T.C. 1992. Analysis of the tissue-specific distribution of mRNAs encoding the plasma membrane calcium-pumping ATPases and characterization of an alternately spliced form of PMCA4 at the cDNA and genomic levels. J. Biol. Chem. 267: 4376-4385.
6. +-ATPase catalytic subunits in cultured neurons and glia: evidence for polarized distribution in neurons. Brain Res. 631: 1-11.
7. 2+-translocating ATPase of the plant plasma membrane. Plant Physiol. 94: 397-400.
8. 2+transport in endoplasmic reticulum isolated from roots of Lepidiium sativum. Planta 159: 84-90.
9. 2+ pump. J. Biol. Chem. 264: 18561-18568.
10. 2+-ATPase isoform 3 gene and characterization of alternative splicing and transcription products. J. Biol. Chem. 267: 19683-19690.
11. 2+ -transport in tonoplast and endoplasmic reticulum vesicles isolated from cultured carrot cells. Plant Physiol. 80: 549-555.
12. Bush, D.S. 1995. Calcium regulation in plant cells and its role in signaling. Annu Rev Plant Physiol. Plant Mol. Biol. 46: 95-122.
13. Canfield, V.A., Okamoto, C.T., Chow, D., Dorfman, J., Gros, P., Forte, J.G. and Levenson, R. 1990. Cloning of the H, K-ATPase b subunit. J. Biol. Chem. 265: 19878-19884.
14. +antiport system driven by the tonoplast pyrophosphate-dependent proton pump from maize roots. Plant Physiol. 137: 471-476.
15. Chomczynski, P. and Sacchi, N. 1987. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
16. +-ATPase) in phloem companion cells. Plant Cell 7: 2053-2067.
17. Drobak, B.K. 1993. Plant phosphoinositides and intracellular signaling. Plant Physiol. 102: 705-709.
18. Escalante, R. and Sastre, L. 1993. Similar alternative splicing events generate two sarcoplasmic or endoplasmic reticulum Ca-ATPase isoforms in the crustacean Artemia franciscana and in vertebrates. J. Biol. Chem. 268: 14090-14095.
19. Escalante, R. and Sastre, L. 1994. Structure of Artemia franciscana sarco/endoplasmic reticulum Ca-ATPase gene. J. Biol. Chem. 269: 13005-13012.
20. Escalante, R. and Sastre, L. 1995. Tissue-specific alternative promoters regulate the expression of the two sarco/endoplasmic reticulum Ca-ATPase isoforms from Artemia franciscana. DNA Cell Biol. 14: 893-900.
21. Evans, D.E., Briars, S.A. and Williams, L.E. 1991. Active calcium transport by plant cell membranes. J. Exp. Bot. 42: 285-303.
22. Evans, R.M. 1988. The steroid and thyroid hormone receptor superfamily. Science 240: 889-895.
23. Feinberg, A.P. and Vogelstein, B. 1983. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132: 6-13.
24. 2+-ATPases in plant cells. Plant Cell 8: 1159-1169.
25. Garoff, H. and Ansorge, W. 1981. Improvements of DNA sequencing gels. Anal. Biochem. 115: 450-457.
26. 2+-transporting ATPase that is expressed predominantly in brain and skeletal muscle. J. Biol. Chem. 264: 18569-18576.
27. +-ATPase gene family in Arabidopsis: genomic sequence of AHA10 which is expressed primarily in developing seeds. Mol. Gen. Genet. 244: 572-587.
28. Heidecker, G. and Messing, J. 1986. Structural analysis of plant genes. Annu. Rev. Plant Physiol. 37: 439-466.
29. +-ATPase a1-, a2- and a3-isoform gene expression. Am. J. Physiol. 363: C1301-C1312.
30. +ATPase whose expression is restricted to anther tissues. Plant J. 5: 311-317.
31. Hundal, H.S., Marette, A., Mitsumoto, A., Ramlal, T., Bolstein, R. and Klip, A. 1992. Insulin induces translocation of the a2 amd b1 subunits of the NaK-ATPase from intracellular compartments to the plasma membrane in mammalian skeletal muscle. J. Biol. Chem. 263: 8162-8167.
32. Knight, M.R., Campbell, A.K., Smith, S.M. and Trewavas, A.J. 1991. Transgenic plant aequorin reports the effect of touch and cold-shock and elicitors on cytoplasmic calcium. Nature 352: 524-526.
33. Korczak, B., Zarain-Herzberg, A., Brandi, C.J., Ingles, C.J., Green, N.M., MacLennan, D.H. 1988. Structure of the rabbit fast-twitch skeletal muscle Ca-ATPase gene. J. Biol. Chem. 263: 4813-4819.
34. 2+ uptake by endoplasmic reticulum fron Zucchini hypocotyls. Plant Physiol. 82: 47-53.
35. Lingrel, J.B. 1992. Na, K-ATPase: Isoform structure, function, and expression. Bioenerget. Biomembr. 24: 263-270.
36. Lynch, J. and Lauchli, A. 1988. Salinity affects intracellular calcium in corn root protoplasts. Plant Physiol. 87: 351-356.
37. 2+-ATPase gene. J. Biol. Chem. 263: 15024-15031.
38. Maniatis, T., Fritsch, E.F. and Sambrook, J. 1982. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
39. Minorsky, P.V. 1985. A heuristic model of chilling injury in plants: A role for calcium as the primary physiological transducer of injury. Plant Cell Environ. 8: 75-94.
40. 2+-ATPase is expressed differentially in phosphate-starved roots of tomato. Physiol. Plant. 101: 540-544.
41. Payvar, F. and Schimke, R.T. 1979. Methylmercury hydroxide enhancement of translation and transcription of ovalbumin and conalbumin mRNA's. J. Biol. Chem. 254: 7636-7642.
42. 2+-ATPase mRNA in NaCl-adapted cells. Plant Physiol. 100: 1471-1478.
43. Pooviah, B.W. and Reddy, A.S.N. 1993. Calcium and signal transduction in plants. Crit. Rev. Plant Sci. 12: 185-211.
44. Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
45. Sanger, F., Nicklen, S. and Coulson, A.R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463-5467.
46. Strehler, E.E., Stehler-Page, M.-A., Vogel, G. and Carafoli, R. 1989. mRNAs for plasma membrane calcium pump isoforms differing in their regulatory domain are generated by alternative splicing that involves two internal donor sites in a single exon. Proc. Natl. Acad. Sci. USA 86: 6908-6912.
47. Sweadner, K.J. 1985. Enzymatic properties of separated isozymes of the Na, K-ATPase. J. Biol. Chem. 260: 11508-11513.
48. Trewavas, A. and Gilroy, S. 1991. Signal transduction in plant cells. Trends Genet. 7: 356-361.
49. 2+-transport ATPase (SERCA2a/b). Biochemistry 303: 979-984.
50. +-ATPase a and b-subunit isoforms within the rat central nervous system. Proc. Natl. Acad. Sci. USA 88: 7425-7429.
51. 2+-ATPase: primary structure and regulation of mRNA abundance by salt. Proc. Natl. Acad. Sci. USA 89: 9205-9209.
52. 2+ pump is expressed in platelets, in lymphoid cells and in mast cells. J. Biol. Chem. 269: 1410-1416.
53. Zarain-Herzberg, A., Maclennan, D.H., Periasamy, M. 1990. Characterization of rabbit cardiac sarco(endo)plasmic reticulum Ca-ATPase gene. J. Biol. Chem. 265: 4670-4677.